Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:D10:D9
Extra
PDB:
ATOM 1 O3' A A 9 20.923 -4.757 -73.305 1.00 51.51 O
ATOM 2 P C A 10 19.669 -5.509 -72.637 1.00 44.85 P
ATOM 3 OP1 C A 10 18.693 -5.780 -73.722 1.00 47.55 O
ATOM 4 OP2 C A 10 19.237 -4.689 -71.480 1.00 39.37 O
ATOM 5 O5' C A 10 20.309 -6.878 -72.125 1.00 47.42 O
ATOM 6 C5' C A 10 20.118 -8.087 -72.847 1.00 48.13 C
ATOM 7 C4' C A 10 21.165 -9.118 -72.504 1.00 47.08 C
ATOM 8 O4' C A 10 22.465 -8.688 -72.987 1.00 49.44 O
ATOM 9 C3' C A 10 21.398 -9.373 -71.024 1.00 46.39 C
ATOM 10 O3' C A 10 20.419 -10.213 -70.439 1.00 53.05 O
ATOM 11 C2' C A 10 22.799 -9.964 -71.013 1.00 43.45 C
ATOM 12 O2' C A 10 22.775 -11.322 -71.428 1.00 40.30 O
ATOM 13 C1' C A 10 23.475 -9.142 -72.107 1.00 42.81 C
ATOM 14 N1 C A 10 24.187 -7.973 -71.554 1.00 40.24 N
ATOM 15 C2 C A 10 25.489 -8.175 -71.098 1.00 41.60 C
ATOM 16 O2 C A 10 25.975 -9.312 -71.181 1.00 43.40 O
ATOM 17 N3 C A 10 26.178 -7.135 -70.581 1.00 38.49 N
ATOM 18 C4 C A 10 25.609 -5.932 -70.514 1.00 35.99 C
ATOM 19 N4 C A 10 26.336 -4.938 -69.996 1.00 36.86 N
ATOM 20 C5 C A 10 24.278 -5.696 -70.973 1.00 35.59 C
ATOM 21 C6 C A 10 23.608 -6.738 -71.480 1.00 39.08 C
ATOM 22 P U A 11 20.117 -10.115 -68.863 1.00 52.15 P
ATOM 23 OP1 U A 11 18.991 -11.033 -68.574 1.00 47.28 O
ATOM 24 OP2 U A 11 19.966 -8.676 -68.538 1.00 52.70 O
ATOM 25 O5' U A 11 21.454 -10.678 -68.211 1.00 39.76 O
TER
ATOM 1 O3' A B 8 20.517 -8.964 -77.114 1.00 56.58 O
ATOM 2 P A B 9 20.218 -7.486 -77.683 1.00 47.19 P
ATOM 3 OP1 A B 9 18.768 -7.440 -78.023 1.00 38.58 O
ATOM 4 OP2 A B 9 21.221 -7.206 -78.755 1.00 50.00 O
ATOM 5 O5' A B 9 20.504 -6.559 -76.424 1.00 51.26 O
ATOM 6 C5' A B 9 21.829 -6.342 -75.967 1.00 49.61 C
ATOM 7 C4' A B 9 22.018 -4.930 -75.486 1.00 46.68 C
ATOM 8 O4' A B 9 22.126 -4.035 -76.621 1.00 52.81 O
ATOM 9 C3' A B 9 20.877 -4.353 -74.664 1.00 50.66 C
ATOM 10 O3' A B 9 20.923 -4.757 -73.305 1.00 51.51 O
ATOM 11 C2' A B 9 21.046 -2.851 -74.861 1.00 49.08 C
ATOM 12 O2' A B 9 22.054 -2.343 -74.000 1.00 46.19 O
ATOM 13 C1' A B 9 21.563 -2.782 -76.300 1.00 52.13 C
ATOM 14 N9 A B 9 20.492 -2.481 -77.272 1.00 48.08 N
ATOM 15 C8 A B 9 19.754 -3.358 -78.028 1.00 52.47 C
ATOM 16 N7 A B 9 18.883 -2.773 -78.816 1.00 55.94 N
ATOM 17 C5 A B 9 19.066 -1.418 -78.568 1.00 54.93 C
ATOM 18 C6 A B 9 18.449 -0.263 -79.083 1.00 54.94 C
ATOM 19 N6 A B 9 17.479 -0.283 -79.999 1.00 59.77 N
ATOM 20 N1 A B 9 18.869 0.934 -78.619 1.00 52.08 N
ATOM 21 C2 A B 9 19.842 0.961 -77.700 1.00 53.24 C
ATOM 22 N3 A B 9 20.500 -0.051 -77.141 1.00 48.56 N
ATOM 23 C4 A B 9 20.059 -1.226 -77.624 1.00 49.78 C
ATOM 24 P C B 10 19.669 -5.509 -72.637 1.00 44.85 P
ATOM 25 OP1 C B 10 18.693 -5.780 -73.722 1.00 47.55 O
ATOM 26 OP2 C B 10 19.237 -4.689 -71.480 1.00 39.37 O
ATOM 27 O5' C B 10 20.309 -6.878 -72.125 1.00 47.42 O
TER
ATOM 2 P C A 10 19.669 -5.509 -72.637 1.00 44.85 P
ATOM 3 OP1 C A 10 18.693 -5.780 -73.722 1.00 47.55 O
ATOM 4 OP2 C A 10 19.237 -4.689 -71.480 1.00 39.37 O
ATOM 5 O5' C A 10 20.309 -6.878 -72.125 1.00 47.42 O
ATOM 6 C5' C A 10 20.118 -8.087 -72.847 1.00 48.13 C
ATOM 7 C4' C A 10 21.165 -9.118 -72.504 1.00 47.08 C
ATOM 8 O4' C A 10 22.465 -8.688 -72.987 1.00 49.44 O
ATOM 9 C3' C A 10 21.398 -9.373 -71.024 1.00 46.39 C
ATOM 10 O3' C A 10 20.419 -10.213 -70.439 1.00 53.05 O
ATOM 11 C2' C A 10 22.799 -9.964 -71.013 1.00 43.45 C
ATOM 12 O2' C A 10 22.775 -11.322 -71.428 1.00 40.30 O
ATOM 13 C1' C A 10 23.475 -9.142 -72.107 1.00 42.81 C
ATOM 14 N1 C A 10 24.187 -7.973 -71.554 1.00 40.24 N
ATOM 15 C2 C A 10 25.489 -8.175 -71.098 1.00 41.60 C
ATOM 16 O2 C A 10 25.975 -9.312 -71.181 1.00 43.40 O
ATOM 17 N3 C A 10 26.178 -7.135 -70.581 1.00 38.49 N
ATOM 18 C4 C A 10 25.609 -5.932 -70.514 1.00 35.99 C
ATOM 19 N4 C A 10 26.336 -4.938 -69.996 1.00 36.86 N
ATOM 20 C5 C A 10 24.278 -5.696 -70.973 1.00 35.59 C
ATOM 21 C6 C A 10 23.608 -6.738 -71.480 1.00 39.08 C
ATOM 22 P U A 11 20.117 -10.115 -68.863 1.00 52.15 P
ATOM 23 OP1 U A 11 18.991 -11.033 -68.574 1.00 47.28 O
ATOM 24 OP2 U A 11 19.966 -8.676 -68.538 1.00 52.70 O
ATOM 25 O5' U A 11 21.454 -10.678 -68.211 1.00 39.76 O
TER
ATOM 1 O3' A B 8 20.517 -8.964 -77.114 1.00 56.58 O
ATOM 2 P A B 9 20.218 -7.486 -77.683 1.00 47.19 P
ATOM 3 OP1 A B 9 18.768 -7.440 -78.023 1.00 38.58 O
ATOM 4 OP2 A B 9 21.221 -7.206 -78.755 1.00 50.00 O
ATOM 5 O5' A B 9 20.504 -6.559 -76.424 1.00 51.26 O
ATOM 6 C5' A B 9 21.829 -6.342 -75.967 1.00 49.61 C
ATOM 7 C4' A B 9 22.018 -4.930 -75.486 1.00 46.68 C
ATOM 8 O4' A B 9 22.126 -4.035 -76.621 1.00 52.81 O
ATOM 9 C3' A B 9 20.877 -4.353 -74.664 1.00 50.66 C
ATOM 10 O3' A B 9 20.923 -4.757 -73.305 1.00 51.51 O
ATOM 11 C2' A B 9 21.046 -2.851 -74.861 1.00 49.08 C
ATOM 12 O2' A B 9 22.054 -2.343 -74.000 1.00 46.19 O
ATOM 13 C1' A B 9 21.563 -2.782 -76.300 1.00 52.13 C
ATOM 14 N9 A B 9 20.492 -2.481 -77.272 1.00 48.08 N
ATOM 15 C8 A B 9 19.754 -3.358 -78.028 1.00 52.47 C
ATOM 16 N7 A B 9 18.883 -2.773 -78.816 1.00 55.94 N
ATOM 17 C5 A B 9 19.066 -1.418 -78.568 1.00 54.93 C
ATOM 18 C6 A B 9 18.449 -0.263 -79.083 1.00 54.94 C
ATOM 19 N6 A B 9 17.479 -0.283 -79.999 1.00 59.77 N
ATOM 20 N1 A B 9 18.869 0.934 -78.619 1.00 52.08 N
ATOM 21 C2 A B 9 19.842 0.961 -77.700 1.00 53.24 C
ATOM 22 N3 A B 9 20.500 -0.051 -77.141 1.00 48.56 N
ATOM 23 C4 A B 9 20.059 -1.226 -77.624 1.00 49.78 C
ATOM 24 P C B 10 19.669 -5.509 -72.637 1.00 44.85 P
ATOM 25 OP1 C B 10 18.693 -5.780 -73.722 1.00 47.55 O
ATOM 26 OP2 C B 10 19.237 -4.689 -71.480 1.00 39.37 O
ATOM 27 O5' C B 10 20.309 -6.878 -72.125 1.00 47.42 O
TER
Atoms:
C2: (25.489,-8.175,-71.098)
OP1: (18.693,-5.780,-73.722)
OP2: (19.237,-4.689,-71.480)
C4: (25.609,-5.932,-70.514)
O5': (20.309,-6.878,-72.125)
C3': (21.398,-9.373,-71.024)
C1': (23.475,-9.142,-72.107)
O4': (22.465,-8.688,-72.987)
C5': (20.118,-8.087,-72.847)
P: (19.669,-5.509,-72.637)
O2: (25.975,-9.312,-71.181)
C4': (21.165,-9.118,-72.504)
C2': (22.799,-9.964,-71.013)
O2': (22.775,-11.322,-71.428)
N1: (24.187,-7.973,-71.554)
N3: (26.178,-7.135,-70.581)
N4: (26.336,-4.938,-69.996)
C6: (23.608,-6.738,-71.480)
C5: (24.278,-5.696,-70.973)
O3': (20.419,-10.213,-70.439)
OP1: (18.693,-5.780,-73.722)
OP2: (19.237,-4.689,-71.480)
C4: (25.609,-5.932,-70.514)
O5': (20.309,-6.878,-72.125)
C3': (21.398,-9.373,-71.024)
C1': (23.475,-9.142,-72.107)
O4': (22.465,-8.688,-72.987)
C5': (20.118,-8.087,-72.847)
P: (19.669,-5.509,-72.637)
O2: (25.975,-9.312,-71.181)
C4': (21.165,-9.118,-72.504)
C2': (22.799,-9.964,-71.013)
O2': (22.775,-11.322,-71.428)
N1: (24.187,-7.973,-71.554)
N3: (26.178,-7.135,-70.581)
N4: (26.336,-4.938,-69.996)
C6: (23.608,-6.738,-71.480)
C5: (24.278,-5.696,-70.973)
O3': (20.419,-10.213,-70.439)
OP1: (18.768,-7.440,-78.023)
OP2: (21.221,-7.206,-78.755)
C3': (20.877,-4.353,-74.664)
C1': (21.563,-2.782,-76.300)
C5': (21.829,-6.342,-75.967)
O4': (22.126,-4.035,-76.621)
C8: (19.754,-3.358,-78.028)
O2': (22.054,-2.343,-74.000)
C6: (18.449,-0.263,-79.083)
C5: (19.066,-1.418,-78.568)
C4: (20.059,-1.226,-77.624)
P: (20.218,-7.486,-77.683)
C4': (22.018,-4.930,-75.486)
C2': (21.046,-2.851,-74.861)
C2: (19.842,0.961,-77.700)
N1: (18.869,0.934,-78.619)
N3: (20.500,-0.051,-77.141)
N6: (17.479,-0.283,-79.999)
N7: (18.883,-2.773,-78.816)
N9: (20.492,-2.481,-77.272)
O5': (20.504,-6.559,-76.424)
O3': (20.923,-4.757,-73.305)
OP2: (21.221,-7.206,-78.755)
C3': (20.877,-4.353,-74.664)
C1': (21.563,-2.782,-76.300)
C5': (21.829,-6.342,-75.967)
O4': (22.126,-4.035,-76.621)
C8: (19.754,-3.358,-78.028)
O2': (22.054,-2.343,-74.000)
C6: (18.449,-0.263,-79.083)
C5: (19.066,-1.418,-78.568)
C4: (20.059,-1.226,-77.624)
P: (20.218,-7.486,-77.683)
C4': (22.018,-4.930,-75.486)
C2': (21.046,-2.851,-74.861)
C2: (19.842,0.961,-77.700)
N1: (18.869,0.934,-78.619)
N3: (20.500,-0.051,-77.141)
N6: (17.479,-0.283,-79.999)
N7: (18.883,-2.773,-78.816)
N9: (20.492,-2.481,-77.272)
O5': (20.504,-6.559,-76.424)
O3': (20.923,-4.757,-73.305)
Image (generated by PyMOL):