Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11104:11103
Extra
PDB:
ATOM 1 O3' A A1103 66.814 -15.264 36.838 1.00 37.13 O
ATOM 2 P C A1104 68.177 -15.879 37.426 1.00 34.18 P
ATOM 3 OP1 C A1104 68.956 -16.387 36.272 1.00 34.49 O
ATOM 4 OP2 C A1104 67.788 -16.809 38.493 1.00 34.04 O
ATOM 5 O5' C A1104 68.912 -14.640 38.032 1.00 34.09 O
ATOM 6 C5' C A1104 68.316 -13.957 39.056 1.00 33.83 C
ATOM 7 C4' C A1104 69.158 -12.870 39.528 1.00 33.80 C
ATOM 8 O4' C A1104 68.275 -11.813 39.964 1.00 33.60 O
ATOM 9 C3' C A1104 69.994 -13.250 40.712 1.00 33.74 C
ATOM 10 O3' C A1104 71.203 -12.496 40.718 1.00 33.84 O
ATOM 11 C2' C A1104 69.126 -12.860 41.891 1.00 33.47 C
ATOM 12 O2' C A1104 69.855 -12.517 43.022 1.00 33.39 O
ATOM 13 C1' C A1104 68.357 -11.655 41.362 1.00 33.41 C
ATOM 14 N1 C A1104 66.983 -11.553 41.920 1.00 33.20 N
ATOM 15 C2 C A1104 66.797 -10.587 42.906 1.00 33.02 C
ATOM 16 O2 C A1104 67.699 -9.785 43.185 1.00 33.06 O
ATOM 17 N3 C A1104 65.587 -10.516 43.499 1.00 32.84 N
ATOM 18 C4 C A1104 64.580 -11.329 43.174 1.00 32.82 C
ATOM 19 N4 C A1104 63.437 -11.125 43.846 1.00 32.63 N
ATOM 20 C5 C A1104 64.759 -12.342 42.184 1.00 32.99 C
ATOM 21 C6 C A1104 65.954 -12.416 41.588 1.00 33.18 C
ATOM 22 P G A1105 72.636 -13.220 40.880 1.00 33.09 P
ATOM 23 OP1 G A1105 73.355 -13.026 39.600 1.00 33.34 O
ATOM 24 OP2 G A1105 72.424 -14.586 41.374 1.00 33.07 O
ATOM 25 O5' G A1105 73.325 -12.357 42.012 1.00 32.99 O
TER
ATOM 1 O3' A B1102 64.986 -15.356 31.969 1.00 36.84 O
ATOM 2 P A B1103 65.315 -16.784 32.612 1.00 37.86 P
ATOM 3 OP1 A B1103 66.595 -17.216 32.019 1.00 38.11 O
ATOM 4 OP2 A B1103 64.164 -17.655 32.454 1.00 37.86 O
ATOM 5 O5' A B1103 65.512 -16.414 34.137 1.00 37.56 O
ATOM 6 C5' A B1103 64.544 -16.753 35.126 1.00 37.33 C
ATOM 7 C4' A B1103 64.508 -15.712 36.230 1.00 37.06 C
ATOM 8 O4' A B1103 63.291 -15.822 37.010 1.00 36.84 O
ATOM 9 C3' A B1103 65.588 -15.787 37.276 1.00 36.98 C
ATOM 10 O3' A B1103 66.814 -15.264 36.838 1.00 37.13 O
ATOM 11 C2' A B1103 65.000 -14.998 38.435 1.00 36.70 C
ATOM 12 O2' A B1103 65.341 -13.628 38.325 1.00 36.67 O
ATOM 13 C1' A B1103 63.483 -15.153 38.228 1.00 36.62 C
ATOM 14 N9 A B1103 62.874 -15.911 39.319 1.00 36.45 N
ATOM 15 C8 A B1103 62.127 -15.399 40.339 1.00 36.21 C
ATOM 16 N7 A B1103 61.794 -16.276 41.261 1.00 36.11 N
ATOM 17 C5 A B1103 62.365 -17.445 40.803 1.00 36.29 C
ATOM 18 C6 A B1103 62.386 -18.737 41.325 1.00 36.31 C
ATOM 19 N6 A B1103 61.777 -19.101 42.449 1.00 36.14 N
ATOM 20 N1 A B1103 63.090 -19.654 40.646 1.00 36.54 N
ATOM 21 C2 A B1103 63.714 -19.300 39.521 1.00 36.73 C
ATOM 22 N3 A B1103 63.770 -18.119 38.920 1.00 36.73 N
ATOM 23 C4 A B1103 63.074 -17.223 39.632 1.00 36.50 C
ATOM 24 P C B1104 68.177 -15.879 37.426 1.00 34.18 P
ATOM 25 OP1 C B1104 68.956 -16.387 36.272 1.00 34.49 O
ATOM 26 OP2 C B1104 67.788 -16.809 38.493 1.00 34.04 O
ATOM 27 O5' C B1104 68.912 -14.640 38.032 1.00 34.09 O
TER
ATOM 2 P C A1104 68.177 -15.879 37.426 1.00 34.18 P
ATOM 3 OP1 C A1104 68.956 -16.387 36.272 1.00 34.49 O
ATOM 4 OP2 C A1104 67.788 -16.809 38.493 1.00 34.04 O
ATOM 5 O5' C A1104 68.912 -14.640 38.032 1.00 34.09 O
ATOM 6 C5' C A1104 68.316 -13.957 39.056 1.00 33.83 C
ATOM 7 C4' C A1104 69.158 -12.870 39.528 1.00 33.80 C
ATOM 8 O4' C A1104 68.275 -11.813 39.964 1.00 33.60 O
ATOM 9 C3' C A1104 69.994 -13.250 40.712 1.00 33.74 C
ATOM 10 O3' C A1104 71.203 -12.496 40.718 1.00 33.84 O
ATOM 11 C2' C A1104 69.126 -12.860 41.891 1.00 33.47 C
ATOM 12 O2' C A1104 69.855 -12.517 43.022 1.00 33.39 O
ATOM 13 C1' C A1104 68.357 -11.655 41.362 1.00 33.41 C
ATOM 14 N1 C A1104 66.983 -11.553 41.920 1.00 33.20 N
ATOM 15 C2 C A1104 66.797 -10.587 42.906 1.00 33.02 C
ATOM 16 O2 C A1104 67.699 -9.785 43.185 1.00 33.06 O
ATOM 17 N3 C A1104 65.587 -10.516 43.499 1.00 32.84 N
ATOM 18 C4 C A1104 64.580 -11.329 43.174 1.00 32.82 C
ATOM 19 N4 C A1104 63.437 -11.125 43.846 1.00 32.63 N
ATOM 20 C5 C A1104 64.759 -12.342 42.184 1.00 32.99 C
ATOM 21 C6 C A1104 65.954 -12.416 41.588 1.00 33.18 C
ATOM 22 P G A1105 72.636 -13.220 40.880 1.00 33.09 P
ATOM 23 OP1 G A1105 73.355 -13.026 39.600 1.00 33.34 O
ATOM 24 OP2 G A1105 72.424 -14.586 41.374 1.00 33.07 O
ATOM 25 O5' G A1105 73.325 -12.357 42.012 1.00 32.99 O
TER
ATOM 1 O3' A B1102 64.986 -15.356 31.969 1.00 36.84 O
ATOM 2 P A B1103 65.315 -16.784 32.612 1.00 37.86 P
ATOM 3 OP1 A B1103 66.595 -17.216 32.019 1.00 38.11 O
ATOM 4 OP2 A B1103 64.164 -17.655 32.454 1.00 37.86 O
ATOM 5 O5' A B1103 65.512 -16.414 34.137 1.00 37.56 O
ATOM 6 C5' A B1103 64.544 -16.753 35.126 1.00 37.33 C
ATOM 7 C4' A B1103 64.508 -15.712 36.230 1.00 37.06 C
ATOM 8 O4' A B1103 63.291 -15.822 37.010 1.00 36.84 O
ATOM 9 C3' A B1103 65.588 -15.787 37.276 1.00 36.98 C
ATOM 10 O3' A B1103 66.814 -15.264 36.838 1.00 37.13 O
ATOM 11 C2' A B1103 65.000 -14.998 38.435 1.00 36.70 C
ATOM 12 O2' A B1103 65.341 -13.628 38.325 1.00 36.67 O
ATOM 13 C1' A B1103 63.483 -15.153 38.228 1.00 36.62 C
ATOM 14 N9 A B1103 62.874 -15.911 39.319 1.00 36.45 N
ATOM 15 C8 A B1103 62.127 -15.399 40.339 1.00 36.21 C
ATOM 16 N7 A B1103 61.794 -16.276 41.261 1.00 36.11 N
ATOM 17 C5 A B1103 62.365 -17.445 40.803 1.00 36.29 C
ATOM 18 C6 A B1103 62.386 -18.737 41.325 1.00 36.31 C
ATOM 19 N6 A B1103 61.777 -19.101 42.449 1.00 36.14 N
ATOM 20 N1 A B1103 63.090 -19.654 40.646 1.00 36.54 N
ATOM 21 C2 A B1103 63.714 -19.300 39.521 1.00 36.73 C
ATOM 22 N3 A B1103 63.770 -18.119 38.920 1.00 36.73 N
ATOM 23 C4 A B1103 63.074 -17.223 39.632 1.00 36.50 C
ATOM 24 P C B1104 68.177 -15.879 37.426 1.00 34.18 P
ATOM 25 OP1 C B1104 68.956 -16.387 36.272 1.00 34.49 O
ATOM 26 OP2 C B1104 67.788 -16.809 38.493 1.00 34.04 O
ATOM 27 O5' C B1104 68.912 -14.640 38.032 1.00 34.09 O
TER
Atoms:
C2: (66.797,-10.587,42.906)
OP1: (68.956,-16.387,36.272)
OP2: (67.788,-16.809,38.493)
C4: (64.580,-11.329,43.174)
O5': (68.912,-14.640,38.032)
C3': (69.994,-13.250,40.712)
C1': (68.357,-11.655,41.362)
O4': (68.275,-11.813,39.964)
C5': (68.316,-13.957,39.056)
P: (68.177,-15.879,37.426)
O2: (67.699,-9.785,43.185)
C4': (69.158,-12.870,39.528)
C2': (69.126,-12.860,41.891)
O2': (69.855,-12.517,43.022)
N1: (66.983,-11.553,41.920)
N3: (65.587,-10.516,43.499)
N4: (63.437,-11.125,43.846)
C6: (65.954,-12.416,41.588)
C5: (64.759,-12.342,42.184)
O3': (71.203,-12.496,40.718)
OP1: (68.956,-16.387,36.272)
OP2: (67.788,-16.809,38.493)
C4: (64.580,-11.329,43.174)
O5': (68.912,-14.640,38.032)
C3': (69.994,-13.250,40.712)
C1': (68.357,-11.655,41.362)
O4': (68.275,-11.813,39.964)
C5': (68.316,-13.957,39.056)
P: (68.177,-15.879,37.426)
O2: (67.699,-9.785,43.185)
C4': (69.158,-12.870,39.528)
C2': (69.126,-12.860,41.891)
O2': (69.855,-12.517,43.022)
N1: (66.983,-11.553,41.920)
N3: (65.587,-10.516,43.499)
N4: (63.437,-11.125,43.846)
C6: (65.954,-12.416,41.588)
C5: (64.759,-12.342,42.184)
O3': (71.203,-12.496,40.718)
OP1: (66.595,-17.216,32.019)
OP2: (64.164,-17.655,32.454)
C3': (65.588,-15.787,37.276)
C1': (63.483,-15.153,38.228)
C5': (64.544,-16.753,35.126)
O4': (63.291,-15.822,37.010)
C8: (62.127,-15.399,40.339)
O2': (65.341,-13.628,38.325)
C6: (62.386,-18.737,41.325)
C5: (62.365,-17.445,40.803)
C4: (63.074,-17.223,39.632)
P: (65.315,-16.784,32.612)
C4': (64.508,-15.712,36.230)
C2': (65.000,-14.998,38.435)
C2: (63.714,-19.300,39.521)
N1: (63.090,-19.654,40.646)
N3: (63.770,-18.119,38.920)
N6: (61.777,-19.101,42.449)
N7: (61.794,-16.276,41.261)
N9: (62.874,-15.911,39.319)
O5': (65.512,-16.414,34.137)
O3': (66.814,-15.264,36.838)
OP2: (64.164,-17.655,32.454)
C3': (65.588,-15.787,37.276)
C1': (63.483,-15.153,38.228)
C5': (64.544,-16.753,35.126)
O4': (63.291,-15.822,37.010)
C8: (62.127,-15.399,40.339)
O2': (65.341,-13.628,38.325)
C6: (62.386,-18.737,41.325)
C5: (62.365,-17.445,40.803)
C4: (63.074,-17.223,39.632)
P: (65.315,-16.784,32.612)
C4': (64.508,-15.712,36.230)
C2': (65.000,-14.998,38.435)
C2: (63.714,-19.300,39.521)
N1: (63.090,-19.654,40.646)
N3: (63.770,-18.119,38.920)
N6: (61.777,-19.101,42.449)
N7: (61.794,-16.276,41.261)
N9: (62.874,-15.911,39.319)
O5': (65.512,-16.414,34.137)
O3': (66.814,-15.264,36.838)
Image (generated by PyMOL):