Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1530:1529
Extra
PDB:
ATOM 1 O3' A A 529 85.873 0.664 24.131 1.00 40.14 O
ATOM 2 P C A 530 87.180 1.050 24.939 1.00 39.65 P
ATOM 3 OP1 C A 530 86.975 2.460 25.399 1.00 39.57 O
ATOM 4 OP2 C A 530 88.343 0.743 24.071 1.00 40.04 O
ATOM 5 O5' C A 530 87.129 0.019 26.168 1.00 39.35 O
ATOM 6 C5' C A 530 85.910 -0.265 26.824 1.00 39.00 C
ATOM 7 C4' C A 530 85.707 -1.744 27.097 1.00 38.88 C
ATOM 8 O4' C A 530 85.500 -2.442 25.872 1.00 39.10 O
ATOM 9 C3' C A 530 86.838 -2.526 27.739 1.00 38.93 C
ATOM 10 O3' C A 530 86.961 -2.288 29.110 1.00 38.68 O
ATOM 11 C2' C A 530 86.432 -3.949 27.430 1.00 38.92 C
ATOM 12 O2' C A 530 85.345 -4.337 28.256 1.00 38.56 O
ATOM 13 C1' C A 530 85.902 -3.789 26.020 1.00 39.12 C
ATOM 14 N1 C A 530 86.910 -4.066 25.002 1.00 39.52 N
ATOM 15 C2 C A 530 87.227 -5.363 24.663 1.00 39.65 C
ATOM 16 O2 C A 530 86.667 -6.235 25.313 1.00 39.42 O
ATOM 17 N3 C A 530 88.148 -5.605 23.676 1.00 40.04 N
ATOM 18 C4 C A 530 88.702 -4.571 23.024 1.00 40.28 C
ATOM 19 N4 C A 530 89.583 -4.779 22.055 1.00 40.66 N
ATOM 20 C5 C A 530 88.354 -3.236 23.350 1.00 40.14 C
ATOM 21 C6 C A 530 87.467 -3.021 24.320 1.00 39.77 C
ATOM 22 P U A 531 88.413 -2.060 29.768 1.00 38.17 P
ATOM 23 OP1 U A 531 88.168 -1.374 31.084 1.00 37.90 O
ATOM 24 OP2 U A 531 89.257 -1.405 28.752 1.00 38.53 O
ATOM 25 O5' U A 531 88.933 -3.549 30.007 1.00 38.21 O
TER
ATOM 1 O3' G B 528 87.792 2.633 18.156 1.00 46.03 O
ATOM 2 P A B 529 88.551 2.150 19.488 1.00 41.74 P
ATOM 3 OP1 A B 529 88.929 3.359 20.242 1.00 41.67 O
ATOM 4 OP2 A B 529 89.597 1.215 19.087 1.00 42.00 O
ATOM 5 O5' A B 529 87.433 1.367 20.272 1.00 41.33 O
ATOM 6 C5' A B 529 86.713 1.977 21.326 1.00 40.97 C
ATOM 7 C4' A B 529 85.609 1.088 21.774 1.00 40.66 C
ATOM 8 O4' A B 529 85.221 0.248 20.671 1.00 40.84 O
ATOM 9 C3' A B 529 85.986 0.110 22.863 1.00 40.43 C
ATOM 10 O3' A B 529 85.873 0.664 24.131 1.00 40.14 O
ATOM 11 C2' A B 529 85.037 -1.033 22.652 1.00 40.30 C
ATOM 12 O2' A B 529 83.760 -0.715 23.189 1.00 39.98 O
ATOM 13 C1' A B 529 84.949 -1.057 21.137 1.00 40.65 C
ATOM 14 N9 A B 529 85.942 -1.973 20.573 1.00 40.94 N
ATOM 15 C8 A B 529 87.032 -1.703 19.793 1.00 41.32 C
ATOM 16 N7 A B 529 87.694 -2.806 19.481 1.00 41.50 N
ATOM 17 C5 A B 529 86.976 -3.811 20.095 1.00 41.22 C
ATOM 18 C6 A B 529 87.166 -5.166 20.131 1.00 41.25 C
ATOM 19 N6 A B 529 88.191 -5.722 19.508 1.00 41.59 N
ATOM 20 N1 A B 529 86.281 -5.912 20.822 1.00 40.94 N
ATOM 21 C2 A B 529 85.285 -5.283 21.413 1.00 40.62 C
ATOM 22 N3 A B 529 85.003 -3.998 21.437 1.00 40.56 N
ATOM 23 C4 A B 529 85.905 -3.319 20.763 1.00 40.88 C
ATOM 24 P C B 530 87.180 1.050 24.939 1.00 39.65 P
ATOM 25 OP1 C B 530 86.975 2.460 25.399 1.00 39.57 O
ATOM 26 OP2 C B 530 88.343 0.743 24.071 1.00 40.04 O
ATOM 27 O5' C B 530 87.129 0.019 26.168 1.00 39.35 O
TER
ATOM 2 P C A 530 87.180 1.050 24.939 1.00 39.65 P
ATOM 3 OP1 C A 530 86.975 2.460 25.399 1.00 39.57 O
ATOM 4 OP2 C A 530 88.343 0.743 24.071 1.00 40.04 O
ATOM 5 O5' C A 530 87.129 0.019 26.168 1.00 39.35 O
ATOM 6 C5' C A 530 85.910 -0.265 26.824 1.00 39.00 C
ATOM 7 C4' C A 530 85.707 -1.744 27.097 1.00 38.88 C
ATOM 8 O4' C A 530 85.500 -2.442 25.872 1.00 39.10 O
ATOM 9 C3' C A 530 86.838 -2.526 27.739 1.00 38.93 C
ATOM 10 O3' C A 530 86.961 -2.288 29.110 1.00 38.68 O
ATOM 11 C2' C A 530 86.432 -3.949 27.430 1.00 38.92 C
ATOM 12 O2' C A 530 85.345 -4.337 28.256 1.00 38.56 O
ATOM 13 C1' C A 530 85.902 -3.789 26.020 1.00 39.12 C
ATOM 14 N1 C A 530 86.910 -4.066 25.002 1.00 39.52 N
ATOM 15 C2 C A 530 87.227 -5.363 24.663 1.00 39.65 C
ATOM 16 O2 C A 530 86.667 -6.235 25.313 1.00 39.42 O
ATOM 17 N3 C A 530 88.148 -5.605 23.676 1.00 40.04 N
ATOM 18 C4 C A 530 88.702 -4.571 23.024 1.00 40.28 C
ATOM 19 N4 C A 530 89.583 -4.779 22.055 1.00 40.66 N
ATOM 20 C5 C A 530 88.354 -3.236 23.350 1.00 40.14 C
ATOM 21 C6 C A 530 87.467 -3.021 24.320 1.00 39.77 C
ATOM 22 P U A 531 88.413 -2.060 29.768 1.00 38.17 P
ATOM 23 OP1 U A 531 88.168 -1.374 31.084 1.00 37.90 O
ATOM 24 OP2 U A 531 89.257 -1.405 28.752 1.00 38.53 O
ATOM 25 O5' U A 531 88.933 -3.549 30.007 1.00 38.21 O
TER
ATOM 1 O3' G B 528 87.792 2.633 18.156 1.00 46.03 O
ATOM 2 P A B 529 88.551 2.150 19.488 1.00 41.74 P
ATOM 3 OP1 A B 529 88.929 3.359 20.242 1.00 41.67 O
ATOM 4 OP2 A B 529 89.597 1.215 19.087 1.00 42.00 O
ATOM 5 O5' A B 529 87.433 1.367 20.272 1.00 41.33 O
ATOM 6 C5' A B 529 86.713 1.977 21.326 1.00 40.97 C
ATOM 7 C4' A B 529 85.609 1.088 21.774 1.00 40.66 C
ATOM 8 O4' A B 529 85.221 0.248 20.671 1.00 40.84 O
ATOM 9 C3' A B 529 85.986 0.110 22.863 1.00 40.43 C
ATOM 10 O3' A B 529 85.873 0.664 24.131 1.00 40.14 O
ATOM 11 C2' A B 529 85.037 -1.033 22.652 1.00 40.30 C
ATOM 12 O2' A B 529 83.760 -0.715 23.189 1.00 39.98 O
ATOM 13 C1' A B 529 84.949 -1.057 21.137 1.00 40.65 C
ATOM 14 N9 A B 529 85.942 -1.973 20.573 1.00 40.94 N
ATOM 15 C8 A B 529 87.032 -1.703 19.793 1.00 41.32 C
ATOM 16 N7 A B 529 87.694 -2.806 19.481 1.00 41.50 N
ATOM 17 C5 A B 529 86.976 -3.811 20.095 1.00 41.22 C
ATOM 18 C6 A B 529 87.166 -5.166 20.131 1.00 41.25 C
ATOM 19 N6 A B 529 88.191 -5.722 19.508 1.00 41.59 N
ATOM 20 N1 A B 529 86.281 -5.912 20.822 1.00 40.94 N
ATOM 21 C2 A B 529 85.285 -5.283 21.413 1.00 40.62 C
ATOM 22 N3 A B 529 85.003 -3.998 21.437 1.00 40.56 N
ATOM 23 C4 A B 529 85.905 -3.319 20.763 1.00 40.88 C
ATOM 24 P C B 530 87.180 1.050 24.939 1.00 39.65 P
ATOM 25 OP1 C B 530 86.975 2.460 25.399 1.00 39.57 O
ATOM 26 OP2 C B 530 88.343 0.743 24.071 1.00 40.04 O
ATOM 27 O5' C B 530 87.129 0.019 26.168 1.00 39.35 O
TER
Atoms:
C2: (87.227,-5.363,24.663)
OP1: (86.975,2.460,25.399)
OP2: (88.343,0.743,24.071)
C4: (88.702,-4.571,23.024)
O5': (87.129,0.019,26.168)
C3': (86.838,-2.526,27.739)
C1': (85.902,-3.789,26.020)
O4': (85.500,-2.442,25.872)
C5': (85.910,-0.265,26.824)
P: (87.180,1.050,24.939)
O2: (86.667,-6.235,25.313)
C4': (85.707,-1.744,27.097)
C2': (86.432,-3.949,27.430)
O2': (85.345,-4.337,28.256)
N1: (86.910,-4.066,25.002)
N3: (88.148,-5.605,23.676)
N4: (89.583,-4.779,22.055)
C6: (87.467,-3.021,24.320)
C5: (88.354,-3.236,23.350)
O3': (86.961,-2.288,29.110)
OP1: (86.975,2.460,25.399)
OP2: (88.343,0.743,24.071)
C4: (88.702,-4.571,23.024)
O5': (87.129,0.019,26.168)
C3': (86.838,-2.526,27.739)
C1': (85.902,-3.789,26.020)
O4': (85.500,-2.442,25.872)
C5': (85.910,-0.265,26.824)
P: (87.180,1.050,24.939)
O2: (86.667,-6.235,25.313)
C4': (85.707,-1.744,27.097)
C2': (86.432,-3.949,27.430)
O2': (85.345,-4.337,28.256)
N1: (86.910,-4.066,25.002)
N3: (88.148,-5.605,23.676)
N4: (89.583,-4.779,22.055)
C6: (87.467,-3.021,24.320)
C5: (88.354,-3.236,23.350)
O3': (86.961,-2.288,29.110)
OP1: (88.929,3.359,20.242)
OP2: (89.597,1.215,19.087)
C3': (85.986,0.110,22.863)
C1': (84.949,-1.057,21.137)
C5': (86.713,1.977,21.326)
O4': (85.221,0.248,20.671)
C8: (87.032,-1.703,19.793)
O2': (83.760,-0.715,23.189)
C6: (87.166,-5.166,20.131)
C5: (86.976,-3.811,20.095)
C4: (85.905,-3.319,20.763)
P: (88.551,2.150,19.488)
C4': (85.609,1.088,21.774)
C2': (85.037,-1.033,22.652)
C2: (85.285,-5.283,21.413)
N1: (86.281,-5.912,20.822)
N3: (85.003,-3.998,21.437)
N6: (88.191,-5.722,19.508)
N7: (87.694,-2.806,19.481)
N9: (85.942,-1.973,20.573)
O5': (87.433,1.367,20.272)
O3': (85.873,0.664,24.131)
OP2: (89.597,1.215,19.087)
C3': (85.986,0.110,22.863)
C1': (84.949,-1.057,21.137)
C5': (86.713,1.977,21.326)
O4': (85.221,0.248,20.671)
C8: (87.032,-1.703,19.793)
O2': (83.760,-0.715,23.189)
C6: (87.166,-5.166,20.131)
C5: (86.976,-3.811,20.095)
C4: (85.905,-3.319,20.763)
P: (88.551,2.150,19.488)
C4': (85.609,1.088,21.774)
C2': (85.037,-1.033,22.652)
C2: (85.285,-5.283,21.413)
N1: (86.281,-5.912,20.822)
N3: (85.003,-3.998,21.437)
N6: (88.191,-5.722,19.508)
N7: (87.694,-2.806,19.481)
N9: (85.942,-1.973,20.573)
O5': (87.433,1.367,20.272)
O3': (85.873,0.664,24.131)
Image (generated by PyMOL):