ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHK:A417:A438

Extra

PDB:
ATOM 1 O3' A A 416 189.311 -22.320-181.838 1.00 63.91 O
ATOM 2 P A A 417 190.645 -21.437-181.894 1.00 73.15 P
ATOM 3 OP1 A A 417 190.745 -20.870-183.271 1.00 67.25 O
ATOM 4 OP2 A A 417 191.759 -22.294-181.395 1.00 64.84 O
ATOM 5 O5' A A 417 190.333 -20.274-180.838 1.00 58.85 O
ATOM 6 C5' A A 417 189.218 -19.416-181.008 1.00 53.63 C
ATOM 7 C4' A A 417 188.563 -19.106-179.696 1.00 57.75 C
ATOM 8 O4' A A 417 188.399 -20.330-178.946 1.00 59.99 O
ATOM 9 C3' A A 417 189.346 -18.200-178.757 1.00 65.87 C
ATOM 10 O3' A A 417 189.196 -16.833-179.058 1.00 71.75 O
ATOM 11 C2' A A 417 188.796 -18.573-177.389 1.00 67.63 C
ATOM 12 O2' A A 417 187.550 -17.929-177.150 1.00 64.13 O
ATOM 13 C1' A A 417 188.549 -20.072-177.564 1.00 70.73 C
ATOM 14 N9 A A 417 189.674 -20.876-177.051 1.00 66.36 N
ATOM 15 C8 A A 417 190.616 -21.575-177.763 1.00 67.54 C
ATOM 16 N7 A A 417 191.485 -22.188-177.001 1.00 68.59 N
ATOM 17 C5 A A 417 191.083 -21.860-175.715 1.00 65.14 C
ATOM 18 C6 A A 417 191.592 -22.199-174.458 1.00 67.30 C
ATOM 19 N6 A A 417 192.666 -22.971-174.309 1.00 64.81 N
ATOM 20 N1 A A 417 190.958 -21.718-173.362 1.00 68.05 N
ATOM 21 C2 A A 417 189.885 -20.934-173.530 1.00 62.60 C
ATOM 22 N3 A A 417 189.316 -20.551-174.665 1.00 64.03 N
ATOM 23 C4 A A 417 189.970 -21.056-175.725 1.00 61.80 C
ATOM 24 P U A 418 190.388 -15.819-178.737 1.00 79.37 P
ATOM 25 OP1 U A 418 189.935 -14.460-179.178 1.00 66.71 O
ATOM 26 OP2 U A 418 191.616 -16.404-179.343 1.00 57.58 O
ATOM 27 O5' U A 418 190.486 -15.870-177.142 1.00 53.96 O
TER

ATOM 1 O3' A B 437 193.932 -26.114-163.422 1.00 59.24 O
ATOM 2 P A B 438 195.439 -25.721-163.780 1.00 68.44 P
ATOM 3 OP1 A B 438 196.300 -26.152-162.650 1.00 72.39 O
ATOM 4 OP2 A B 438 195.420 -24.276-164.167 1.00 81.54 O
ATOM 5 O5' A B 438 195.732 -26.626-165.055 1.00 55.40 O
ATOM 6 C5' A B 438 195.457 -28.018-165.039 1.00 45.12 C
ATOM 7 C4' A B 438 195.419 -28.579-166.433 1.00 49.91 C
ATOM 8 O4' A B 438 194.220 -28.109-167.103 1.00 46.36 O
ATOM 9 C3' A B 438 196.576 -28.163-167.359 1.00 50.15 C
ATOM 10 O3' A B 438 197.736 -28.976-167.211 1.00 45.72 O
ATOM 11 C2' A B 438 195.956 -28.242-168.749 1.00 47.70 C
ATOM 12 O2' A B 438 195.989 -29.579-169.239 1.00 47.74 O
ATOM 13 C1' A B 438 194.497 -27.840-168.467 1.00 50.72 C
ATOM 14 N9 A B 438 194.275 -26.402-168.715 1.00 58.63 N
ATOM 15 C8 A B 438 194.418 -25.348-167.827 1.00 62.57 C
ATOM 16 N7 A B 438 194.170 -24.169-168.355 1.00 63.74 N
ATOM 17 C5 A B 438 193.850 -24.471-169.680 1.00 58.31 C
ATOM 18 C6 A B 438 193.492 -23.658-170.765 1.00 58.44 C
ATOM 19 N6 A B 438 193.379 -22.325-170.717 1.00 63.88 N
ATOM 20 N1 A B 438 193.241 -24.284-171.924 1.00 60.41 N
ATOM 21 C2 A B 438 193.352 -25.615-171.983 1.00 56.32 C
ATOM 22 N3 A B 438 193.680 -26.486-171.047 1.00 52.86 N
ATOM 23 C4 A B 438 193.915 -25.837-169.909 1.00 55.13 C
ATOM 24 P G B 439 199.173 -28.444-167.713 1.00 63.57 P
ATOM 25 OP1 G B 439 198.980 -27.813-169.053 1.00 63.19 O
ATOM 26 OP2 G B 439 200.118 -29.571-167.597 1.00 62.51 O
ATOM 27 O5' G B 439 199.525 -27.324-166.639 1.00 59.42 O
TER

Atoms:
OP1: (190.745,-20.870,-183.271)
OP2: (191.759,-22.294,-181.395)
C3': (189.346,-18.200,-178.757)
C1': (188.549,-20.072,-177.564)
C5': (189.218,-19.416,-181.008)
O4': (188.399,-20.330,-178.946)
C8: (190.616,-21.575,-177.763)
O2': (187.550,-17.929,-177.150)
C6: (191.592,-22.199,-174.458)
C5: (191.083,-21.860,-175.715)
C4: (189.970,-21.056,-175.725)
P: (190.645,-21.437,-181.894)
C4': (188.563,-19.106,-179.696)
C2': (188.796,-18.573,-177.389)
C2: (189.885,-20.934,-173.530)
N1: (190.958,-21.718,-173.362)
N3: (189.316,-20.551,-174.665)
N6: (192.666,-22.971,-174.309)
N7: (191.485,-22.188,-177.001)
N9: (189.674,-20.876,-177.051)
O5': (190.333,-20.274,-180.838)
O3': (189.196,-16.833,-179.058)
OP1: (196.300,-26.152,-162.650)
OP2: (195.420,-24.276,-164.167)
C3': (196.576,-28.163,-167.359)
C1': (194.497,-27.840,-168.467)
C5': (195.457,-28.018,-165.039)
O4': (194.220,-28.109,-167.103)
C8: (194.418,-25.348,-167.827)
O2': (195.989,-29.579,-169.239)
C6: (193.492,-23.658,-170.765)
C5: (193.850,-24.471,-169.680)
C4: (193.915,-25.837,-169.909)
P: (195.439,-25.721,-163.780)
C4': (195.419,-28.579,-166.433)
C2': (195.956,-28.242,-168.749)
C2: (193.352,-25.615,-171.983)
N1: (193.241,-24.284,-171.924)
N3: (193.680,-26.486,-171.047)
N6: (193.379,-22.325,-170.717)
N7: (194.170,-24.169,-168.355)
N9: (194.275,-26.402,-168.715)
O5': (195.732,-26.626,-165.055)
O3': (197.736,-28.976,-167.211)
Image (generated by PyMOL):
PyMOL image
show in jmol