ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHK:A493:A516

Extra

PDB:
ATOM 1 O3' A A 492 227.068 -64.633 -98.084 1.00 44.04 O
ATOM 2 P A A 493 227.439 -65.463 -99.421 1.00 57.63 P
ATOM 3 OP1 A A 493 228.443 -64.657-100.179 1.00 39.23 O
ATOM 4 OP2 A A 493 226.142 -65.817-100.084 1.00 49.42 O
ATOM 5 O5' A A 493 228.141 -66.775 -98.852 1.00 40.37 O
ATOM 6 C5' A A 493 229.359 -67.244 -99.415 1.00 42.75 C
ATOM 7 C4' A A 493 229.850 -68.507 -98.741 1.00 45.74 C
ATOM 8 O4' A A 493 228.701 -69.267 -98.244 1.00 43.65 O
ATOM 9 C3' A A 493 230.626 -69.472 -99.659 1.00 42.71 C
ATOM 10 O3' A A 493 231.621 -70.200 -98.922 1.00 54.08 O
ATOM 11 C2' A A 493 229.545 -70.465-100.046 1.00 44.56 C
ATOM 12 O2' A A 493 230.042 -71.708-100.486 1.00 51.61 O
ATOM 13 C1' A A 493 228.823 -70.590 -98.711 1.00 43.48 C
ATOM 14 N9 A A 493 227.503 -71.224 -98.766 1.00 42.10 N
ATOM 15 C8 A A 493 226.488 -71.085 -99.653 1.00 39.41 C
ATOM 16 N7 A A 493 225.477 -71.874 -99.371 1.00 45.65 N
ATOM 17 C5 A A 493 225.846 -72.583 -98.231 1.00 43.60 C
ATOM 18 C6 A A 493 225.208 -73.567 -97.424 1.00 45.33 C
ATOM 19 N6 A A 493 223.973 -74.064 -97.622 1.00 42.15 N
ATOM 20 N1 A A 493 225.881 -74.042 -96.356 1.00 41.85 N
ATOM 21 C2 A A 493 227.101 -73.551 -96.120 1.00 42.41 C
ATOM 22 N3 A A 493 227.788 -72.645 -96.797 1.00 44.58 N
ATOM 23 C4 A A 493 227.103 -72.191 -97.861 1.00 43.08 C
ATOM 24 P A A 494 232.794 -69.479 -98.090 1.00 50.25 P
ATOM 25 OP1 A A 494 232.534 -68.007 -98.138 1.00 51.47 O
ATOM 26 OP2 A A 494 234.076 -69.986 -98.609 1.00 47.84 O
ATOM 27 O5' A A 494 232.537 -70.042 -96.612 1.00 37.69 O
TER

ATOM 1 O3' A B 515 216.825 -78.055 -88.294 1.00 53.33 O
ATOM 2 P A B 516 217.828 -79.294 -88.483 1.00 55.49 P
ATOM 3 OP1 A B 516 216.995 -80.536 -88.328 1.00 47.37 O
ATOM 4 OP2 A B 516 218.984 -79.064 -87.566 1.00 56.28 O
ATOM 5 O5' A B 516 218.302 -79.155 -89.991 1.00 43.13 O
ATOM 6 C5' A B 516 217.371 -79.313 -91.050 1.00 49.16 C
ATOM 7 C4' A B 516 218.013 -79.918 -92.264 1.00 53.13 C
ATOM 8 O4' A B 516 218.955 -78.958 -92.839 1.00 48.08 O
ATOM 9 C3' A B 516 218.801 -81.214 -92.015 1.00 47.24 C
ATOM 10 O3' A B 516 218.476 -82.180 -93.000 1.00 56.80 O
ATOM 11 C2' A B 516 220.250 -80.787 -92.204 1.00 55.48 C
ATOM 12 O2' A B 516 221.095 -81.812 -92.687 1.00 66.60 O
ATOM 13 C1' A B 516 220.115 -79.646 -93.210 1.00 46.09 C
ATOM 14 N9 A B 516 221.244 -78.724 -93.215 1.00 45.66 N
ATOM 15 C8 A B 516 222.195 -78.577 -92.238 1.00 47.14 C
ATOM 16 N7 A B 516 223.139 -77.722 -92.545 1.00 46.60 N
ATOM 17 C5 A B 516 222.810 -77.295 -93.823 1.00 43.03 C
ATOM 18 C6 A B 516 223.420 -76.380 -94.704 1.00 38.63 C
ATOM 19 N6 A B 516 224.540 -75.690 -94.475 1.00 35.18 N
ATOM 20 N1 A B 516 222.806 -76.192 -95.880 1.00 42.23 N
ATOM 21 C2 A B 516 221.681 -76.877 -96.131 1.00 41.02 C
ATOM 22 N3 A B 516 221.002 -77.748 -95.400 1.00 37.71 N
ATOM 23 C4 A B 516 221.641 -77.920 -94.246 1.00 43.34 C
ATOM 24 P U B 517 217.874 -83.598 -92.557 1.00 67.45 P
ATOM 25 OP1 U B 517 217.732 -83.571 -91.084 1.00 85.22 O
ATOM 26 OP2 U B 517 218.726 -84.644 -93.173 1.00 88.67 O
ATOM 27 O5' U B 517 216.431 -83.592 -93.238 1.00110.15 O
TER

Atoms:
OP1: (228.443,-64.657,-100.179)
OP2: (226.142,-65.817,-100.084)
C3': (230.626,-69.472,-99.659)
C1': (228.823,-70.590,-98.711)
C5': (229.359,-67.244,-99.415)
O4': (228.701,-69.267,-98.244)
C8: (226.488,-71.085,-99.653)
O2': (230.042,-71.708,-100.486)
C6: (225.208,-73.567,-97.424)
C5: (225.846,-72.583,-98.231)
C4: (227.103,-72.191,-97.861)
P: (227.439,-65.463,-99.421)
C4': (229.850,-68.507,-98.741)
C2': (229.545,-70.465,-100.046)
C2: (227.101,-73.551,-96.120)
N1: (225.881,-74.042,-96.356)
N3: (227.788,-72.645,-96.797)
N6: (223.973,-74.064,-97.622)
N7: (225.477,-71.874,-99.371)
N9: (227.503,-71.224,-98.766)
O5': (228.141,-66.775,-98.852)
O3': (231.621,-70.200,-98.922)
OP1: (216.995,-80.536,-88.328)
OP2: (218.984,-79.064,-87.566)
C3': (218.801,-81.214,-92.015)
C1': (220.115,-79.646,-93.210)
C5': (217.371,-79.313,-91.050)
O4': (218.955,-78.958,-92.839)
C8: (222.195,-78.577,-92.238)
O2': (221.095,-81.812,-92.687)
C6: (223.420,-76.380,-94.704)
C5: (222.810,-77.295,-93.823)
C4: (221.641,-77.920,-94.246)
P: (217.828,-79.294,-88.483)
C4': (218.013,-79.918,-92.264)
C2': (220.250,-80.787,-92.204)
C2: (221.681,-76.877,-96.131)
N1: (222.806,-76.192,-95.880)
N3: (221.002,-77.748,-95.400)
N6: (224.540,-75.690,-94.475)
N7: (223.139,-77.722,-92.545)
N9: (221.244,-78.724,-93.215)
O5': (218.302,-79.155,-89.991)
O3': (218.476,-82.180,-93.000)
Image (generated by PyMOL):
PyMOL image
show in jmol