ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3P22:E20:G20

Extra

PDB:
ATOM 1 O3' A A 19 4.796 -11.466 26.757 1.00 45.02 O
ATOM 2 P A A 20 6.024 -11.518 25.747 1.00 44.52 P
ATOM 3 OP1 A A 20 5.652 -10.764 24.520 1.00 45.82 O
ATOM 4 OP2 A A 20 6.440 -12.954 25.613 1.00 42.43 O
ATOM 5 O5' A A 20 7.121 -10.650 26.527 1.00 43.41 O
ATOM 6 C5' A A 20 6.892 -9.271 26.763 1.00 44.06 C
ATOM 7 C4' A A 20 7.902 -8.719 27.754 1.00 47.40 C
ATOM 8 O4' A A 20 7.782 -9.339 29.082 1.00 48.01 O
ATOM 9 C3' A A 20 9.352 -8.949 27.378 1.00 48.14 C
ATOM 10 O3' A A 20 9.770 -7.947 26.494 1.00 49.89 O
ATOM 11 C2' A A 20 10.039 -8.804 28.731 1.00 49.01 C
ATOM 12 O2' A A 20 10.129 -7.441 29.111 1.00 51.43 O
ATOM 13 C1' A A 20 9.072 -9.571 29.640 1.00 47.52 C
ATOM 14 N9 A A 20 9.288 -11.029 29.693 1.00 45.75 N
ATOM 15 C8 A A 20 8.615 -11.998 28.983 1.00 45.11 C
ATOM 16 N7 A A 20 9.000 -13.232 29.231 1.00 43.43 N
ATOM 17 C5 A A 20 9.995 -13.074 30.177 1.00 43.13 C
ATOM 18 C6 A A 20 10.817 -13.997 30.873 1.00 42.36 C
ATOM 19 N6 A A 20 10.760 -15.321 30.698 1.00 43.34 N
ATOM 20 N1 A A 20 11.702 -13.516 31.771 1.00 41.25 N
ATOM 21 C2 A A 20 11.779 -12.197 31.947 1.00 41.45 C
ATOM 22 N3 A A 20 11.060 -11.232 31.357 1.00 43.41 N
ATOM 23 C4 A A 20 10.178 -11.730 30.476 1.00 43.79 C
ATOM 24 P G A 21 10.493 -8.343 25.123 1.00 49.84 P
ATOM 25 OP1 G A 21 10.958 -7.074 24.503 1.00 51.43 O
ATOM 26 OP2 G A 21 9.663 -9.313 24.380 1.00 47.28 O
ATOM 27 O5' G A 21 11.762 -9.129 25.654 1.00 48.96 O
TER

ATOM 1 O3' A B 19 16.749 -19.005 39.723 1.00 45.04 O
ATOM 2 P A B 20 17.835 -19.153 38.566 1.00 46.11 P
ATOM 3 OP1 A B 20 18.927 -19.992 39.105 1.00 47.64 O
ATOM 4 OP2 A B 20 18.118 -17.780 38.064 1.00 44.27 O
ATOM 5 O5' A B 20 17.081 -20.038 37.451 1.00 45.33 O
ATOM 6 C5' A B 20 17.034 -21.459 37.551 1.00 45.23 C
ATOM 7 C4' A B 20 16.146 -22.018 36.454 1.00 45.08 C
ATOM 8 O4' A B 20 14.909 -21.272 36.459 1.00 44.69 O
ATOM 9 C3' A B 20 16.644 -21.796 35.035 1.00 44.75 C
ATOM 10 O3' A B 20 17.613 -22.773 34.660 1.00 45.03 O
ATOM 11 C2' A B 20 15.340 -21.909 34.234 1.00 45.48 C
ATOM 12 O2' A B 20 14.866 -23.243 34.061 1.00 46.53 O
ATOM 13 C1' A B 20 14.395 -21.130 35.141 1.00 44.27 C
ATOM 14 N9 A B 20 14.303 -19.703 34.842 1.00 42.90 N
ATOM 15 C8 A B 20 14.887 -18.689 35.561 1.00 43.22 C
ATOM 16 N7 A B 20 14.640 -17.483 35.080 1.00 43.32 N
ATOM 17 C5 A B 20 13.830 -17.723 33.981 1.00 40.78 C
ATOM 18 C6 A B 20 13.234 -16.853 33.051 1.00 40.29 C
ATOM 19 N6 A B 20 13.368 -15.526 33.108 1.00 39.48 N
ATOM 20 N1 A B 20 12.488 -17.402 32.062 1.00 41.48 N
ATOM 21 C2 A B 20 12.367 -18.744 32.024 1.00 41.76 C
ATOM 22 N3 A B 20 12.888 -19.655 32.850 1.00 41.26 N
ATOM 23 C4 A B 20 13.608 -19.081 33.818 1.00 41.21 C
ATOM 24 P G B 21 18.995 -22.323 33.958 1.00 46.83 P
ATOM 25 OP1 G B 21 19.712 -23.556 33.556 1.00 48.57 O
ATOM 26 OP2 G B 21 19.683 -21.289 34.775 1.00 45.00 O
ATOM 27 O5' G B 21 18.505 -21.583 32.620 1.00 45.96 O
TER

Atoms:
OP1: (5.652,-10.764,24.520)
OP2: (6.440,-12.954,25.613)
C3': (9.352,-8.949,27.378)
C1': (9.072,-9.571,29.640)
C5': (6.892,-9.271,26.763)
O4': (7.782,-9.339,29.082)
C8: (8.615,-11.998,28.983)
O2': (10.129,-7.441,29.111)
C6: (10.817,-13.997,30.873)
C5: (9.995,-13.074,30.177)
C4: (10.178,-11.730,30.476)
P: (6.024,-11.518,25.747)
C4': (7.902,-8.719,27.754)
C2': (10.039,-8.804,28.731)
C2: (11.779,-12.197,31.947)
N1: (11.702,-13.516,31.771)
N3: (11.060,-11.232,31.357)
N6: (10.760,-15.321,30.698)
N7: (9.000,-13.232,29.231)
N9: (9.288,-11.029,29.693)
O5': (7.121,-10.650,26.527)
O3': (9.770,-7.947,26.494)
OP1: (18.927,-19.992,39.105)
OP2: (18.118,-17.780,38.064)
C3': (16.644,-21.796,35.035)
C1': (14.395,-21.130,35.141)
C5': (17.034,-21.459,37.551)
O4': (14.909,-21.272,36.459)
C8: (14.887,-18.689,35.561)
O2': (14.866,-23.243,34.061)
C6: (13.234,-16.853,33.051)
C5: (13.830,-17.723,33.981)
C4: (13.608,-19.081,33.818)
P: (17.835,-19.153,38.566)
C4': (16.146,-22.018,36.454)
C2': (15.340,-21.909,34.234)
C2: (12.367,-18.744,32.024)
N1: (12.488,-17.402,32.062)
N3: (12.888,-19.655,32.850)
N6: (13.368,-15.526,33.108)
N7: (14.640,-17.483,35.080)
N9: (14.303,-19.703,34.842)
O5': (17.081,-20.038,37.451)
O3': (17.613,-22.773,34.660)
Image (generated by PyMOL):
PyMOL image
show in jmol