Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:B27:B28
Extra
PDB:
ATOM 1 O3' U A 26 -3.741 41.785 5.792 1.00 31.28 O
ATOM 2 P G A 27 -4.807 42.790 6.445 1.00 40.24 P
ATOM 3 OP1 G A 27 -4.164 44.120 6.539 1.00 44.05 O
ATOM 4 OP2 G A 27 -5.374 42.157 7.654 1.00 37.92 O
ATOM 5 O5' G A 27 -5.957 42.885 5.340 1.00 40.01 O
ATOM 6 C5' G A 27 -5.697 43.522 4.099 1.00 36.13 C
ATOM 7 C4' G A 27 -6.823 43.238 3.126 1.00 37.83 C
ATOM 8 O4' G A 27 -6.924 41.806 2.896 1.00 34.99 O
ATOM 9 C3' G A 27 -8.210 43.621 3.617 1.00 38.26 C
ATOM 10 O3' G A 27 -8.447 45.020 3.464 1.00 38.61 O
ATOM 11 C2' G A 27 -9.060 42.793 2.663 1.00 37.21 C
ATOM 12 O2' G A 27 -9.112 43.353 1.368 1.00 37.02 O
ATOM 13 C1' G A 27 -8.281 41.479 2.650 1.00 36.23 C
ATOM 14 N9 G A 27 -8.763 40.567 3.680 1.00 36.28 N
ATOM 15 C8 G A 27 -8.402 40.537 5.005 1.00 39.19 C
ATOM 16 N7 G A 27 -9.018 39.611 5.688 1.00 43.15 N
ATOM 17 C5 G A 27 -9.845 38.993 4.756 1.00 39.79 C
ATOM 18 C6 G A 27 -10.753 37.919 4.909 1.00 41.82 C
ATOM 19 O6 G A 27 -11.016 37.277 5.934 1.00 39.22 O
ATOM 20 N1 G A 27 -11.390 37.606 3.709 1.00 37.96 N
ATOM 21 C2 G A 27 -11.175 38.251 2.514 1.00 36.77 C
ATOM 22 N2 G A 27 -11.881 37.813 1.461 1.00 37.65 N
ATOM 23 N3 G A 27 -10.328 39.257 2.359 1.00 39.82 N
ATOM 24 C4 G A 27 -9.701 39.573 3.517 1.00 38.10 C
ATOM 25 P A A 28 -9.352 45.792 4.538 1.00 40.94 P
ATOM 26 OP1 A A 28 -9.136 47.243 4.352 1.00 40.57 O
ATOM 27 OP2 A A 28 -9.118 45.166 5.859 1.00 38.27 O
ATOM 28 O5' A A 28 -10.846 45.461 4.077 1.00 37.00 O
TER
ATOM 1 O3' G B 27 -8.447 45.020 3.464 1.00 38.61 O
ATOM 2 P A B 28 -9.352 45.792 4.538 1.00 40.94 P
ATOM 3 OP1 A B 28 -9.136 47.243 4.352 1.00 40.57 O
ATOM 4 OP2 A B 28 -9.118 45.166 5.859 1.00 38.27 O
ATOM 5 O5' A B 28 -10.846 45.461 4.077 1.00 37.00 O
ATOM 6 C5' A B 28 -11.936 45.813 4.915 1.00 37.96 C
ATOM 7 C4' A B 28 -13.244 45.411 4.265 1.00 40.51 C
ATOM 8 O4' A B 28 -13.426 46.176 3.051 1.00 40.81 O
ATOM 9 C3' A B 28 -13.305 43.958 3.823 1.00 36.89 C
ATOM 10 O3' A B 28 -13.738 43.152 4.912 1.00 34.99 O
ATOM 11 C2' A B 28 -14.341 44.015 2.703 1.00 37.76 C
ATOM 12 O2' A B 28 -15.664 43.965 3.194 1.00 40.66 O
ATOM 13 C1' A B 28 -14.097 45.390 2.085 1.00 39.04 C
ATOM 14 N9 A B 28 -13.303 45.408 0.856 1.00 37.31 N
ATOM 15 C8 A B 28 -12.115 46.058 0.669 1.00 37.32 C
ATOM 16 N7 A B 28 -11.618 45.919 -0.537 1.00 36.35 N
ATOM 17 C5 A B 28 -12.543 45.124 -1.191 1.00 36.67 C
ATOM 18 C6 A B 28 -12.594 44.613 -2.503 1.00 36.67 C
ATOM 19 N6 A B 28 -11.649 44.849 -3.419 1.00 35.22 N
ATOM 20 N1 A B 28 -13.654 43.850 -2.840 1.00 34.07 N
ATOM 21 C2 A B 28 -14.596 43.618 -1.919 1.00 36.93 C
ATOM 22 N3 A B 28 -14.656 44.042 -0.656 1.00 40.07 N
ATOM 23 C4 A B 28 -13.590 44.799 -0.349 1.00 39.15 C
ATOM 24 P G B 29 -13.098 41.703 5.157 1.00 39.97 P
ATOM 25 OP1 G B 29 -13.586 41.204 6.462 1.00 39.94 O
ATOM 26 OP2 G B 29 -11.643 41.779 4.898 1.00 34.14 O
ATOM 27 O5' G B 29 -13.796 40.832 4.015 1.00 36.47 O
TER
ATOM 2 P G A 27 -4.807 42.790 6.445 1.00 40.24 P
ATOM 3 OP1 G A 27 -4.164 44.120 6.539 1.00 44.05 O
ATOM 4 OP2 G A 27 -5.374 42.157 7.654 1.00 37.92 O
ATOM 5 O5' G A 27 -5.957 42.885 5.340 1.00 40.01 O
ATOM 6 C5' G A 27 -5.697 43.522 4.099 1.00 36.13 C
ATOM 7 C4' G A 27 -6.823 43.238 3.126 1.00 37.83 C
ATOM 8 O4' G A 27 -6.924 41.806 2.896 1.00 34.99 O
ATOM 9 C3' G A 27 -8.210 43.621 3.617 1.00 38.26 C
ATOM 10 O3' G A 27 -8.447 45.020 3.464 1.00 38.61 O
ATOM 11 C2' G A 27 -9.060 42.793 2.663 1.00 37.21 C
ATOM 12 O2' G A 27 -9.112 43.353 1.368 1.00 37.02 O
ATOM 13 C1' G A 27 -8.281 41.479 2.650 1.00 36.23 C
ATOM 14 N9 G A 27 -8.763 40.567 3.680 1.00 36.28 N
ATOM 15 C8 G A 27 -8.402 40.537 5.005 1.00 39.19 C
ATOM 16 N7 G A 27 -9.018 39.611 5.688 1.00 43.15 N
ATOM 17 C5 G A 27 -9.845 38.993 4.756 1.00 39.79 C
ATOM 18 C6 G A 27 -10.753 37.919 4.909 1.00 41.82 C
ATOM 19 O6 G A 27 -11.016 37.277 5.934 1.00 39.22 O
ATOM 20 N1 G A 27 -11.390 37.606 3.709 1.00 37.96 N
ATOM 21 C2 G A 27 -11.175 38.251 2.514 1.00 36.77 C
ATOM 22 N2 G A 27 -11.881 37.813 1.461 1.00 37.65 N
ATOM 23 N3 G A 27 -10.328 39.257 2.359 1.00 39.82 N
ATOM 24 C4 G A 27 -9.701 39.573 3.517 1.00 38.10 C
ATOM 25 P A A 28 -9.352 45.792 4.538 1.00 40.94 P
ATOM 26 OP1 A A 28 -9.136 47.243 4.352 1.00 40.57 O
ATOM 27 OP2 A A 28 -9.118 45.166 5.859 1.00 38.27 O
ATOM 28 O5' A A 28 -10.846 45.461 4.077 1.00 37.00 O
TER
ATOM 1 O3' G B 27 -8.447 45.020 3.464 1.00 38.61 O
ATOM 2 P A B 28 -9.352 45.792 4.538 1.00 40.94 P
ATOM 3 OP1 A B 28 -9.136 47.243 4.352 1.00 40.57 O
ATOM 4 OP2 A B 28 -9.118 45.166 5.859 1.00 38.27 O
ATOM 5 O5' A B 28 -10.846 45.461 4.077 1.00 37.00 O
ATOM 6 C5' A B 28 -11.936 45.813 4.915 1.00 37.96 C
ATOM 7 C4' A B 28 -13.244 45.411 4.265 1.00 40.51 C
ATOM 8 O4' A B 28 -13.426 46.176 3.051 1.00 40.81 O
ATOM 9 C3' A B 28 -13.305 43.958 3.823 1.00 36.89 C
ATOM 10 O3' A B 28 -13.738 43.152 4.912 1.00 34.99 O
ATOM 11 C2' A B 28 -14.341 44.015 2.703 1.00 37.76 C
ATOM 12 O2' A B 28 -15.664 43.965 3.194 1.00 40.66 O
ATOM 13 C1' A B 28 -14.097 45.390 2.085 1.00 39.04 C
ATOM 14 N9 A B 28 -13.303 45.408 0.856 1.00 37.31 N
ATOM 15 C8 A B 28 -12.115 46.058 0.669 1.00 37.32 C
ATOM 16 N7 A B 28 -11.618 45.919 -0.537 1.00 36.35 N
ATOM 17 C5 A B 28 -12.543 45.124 -1.191 1.00 36.67 C
ATOM 18 C6 A B 28 -12.594 44.613 -2.503 1.00 36.67 C
ATOM 19 N6 A B 28 -11.649 44.849 -3.419 1.00 35.22 N
ATOM 20 N1 A B 28 -13.654 43.850 -2.840 1.00 34.07 N
ATOM 21 C2 A B 28 -14.596 43.618 -1.919 1.00 36.93 C
ATOM 22 N3 A B 28 -14.656 44.042 -0.656 1.00 40.07 N
ATOM 23 C4 A B 28 -13.590 44.799 -0.349 1.00 39.15 C
ATOM 24 P G B 29 -13.098 41.703 5.157 1.00 39.97 P
ATOM 25 OP1 G B 29 -13.586 41.204 6.462 1.00 39.94 O
ATOM 26 OP2 G B 29 -11.643 41.779 4.898 1.00 34.14 O
ATOM 27 O5' G B 29 -13.796 40.832 4.015 1.00 36.47 O
TER
Atoms:
OP1: (-4.164,44.120,6.539)
OP2: (-5.374,42.157,7.654)
C3': (-8.210,43.621,3.617)
C1': (-8.281,41.479,2.650)
C5': (-5.697,43.522,4.099)
O6: (-11.016,37.277,5.934)
O4': (-6.924,41.806,2.896)
C8: (-8.402,40.537,5.005)
C2: (-11.175,38.251,2.514)
C6: (-10.753,37.919,4.909)
C5: (-9.845,38.993,4.756)
C4: (-9.701,39.573,3.517)
P: (-4.807,42.790,6.445)
C4': (-6.823,43.238,3.126)
C2': (-9.060,42.793,2.663)
O2': (-9.112,43.353,1.368)
N1: (-11.390,37.606,3.709)
N2: (-11.881,37.813,1.461)
N3: (-10.328,39.257,2.359)
N7: (-9.018,39.611,5.688)
N9: (-8.763,40.567,3.680)
O5': (-5.957,42.885,5.340)
O3': (-8.447,45.020,3.464)
OP2: (-5.374,42.157,7.654)
C3': (-8.210,43.621,3.617)
C1': (-8.281,41.479,2.650)
C5': (-5.697,43.522,4.099)
O6: (-11.016,37.277,5.934)
O4': (-6.924,41.806,2.896)
C8: (-8.402,40.537,5.005)
C2: (-11.175,38.251,2.514)
C6: (-10.753,37.919,4.909)
C5: (-9.845,38.993,4.756)
C4: (-9.701,39.573,3.517)
P: (-4.807,42.790,6.445)
C4': (-6.823,43.238,3.126)
C2': (-9.060,42.793,2.663)
O2': (-9.112,43.353,1.368)
N1: (-11.390,37.606,3.709)
N2: (-11.881,37.813,1.461)
N3: (-10.328,39.257,2.359)
N7: (-9.018,39.611,5.688)
N9: (-8.763,40.567,3.680)
O5': (-5.957,42.885,5.340)
O3': (-8.447,45.020,3.464)
OP1: (-9.136,47.243,4.352)
OP2: (-9.118,45.166,5.859)
C3': (-13.305,43.958,3.823)
C1': (-14.097,45.390,2.085)
C5': (-11.936,45.813,4.915)
O4': (-13.426,46.176,3.051)
C8: (-12.115,46.058,0.669)
O2': (-15.664,43.965,3.194)
C6: (-12.594,44.613,-2.503)
C5: (-12.543,45.124,-1.191)
C4: (-13.590,44.799,-0.349)
P: (-9.352,45.792,4.538)
C4': (-13.244,45.411,4.265)
C2': (-14.341,44.015,2.703)
C2: (-14.596,43.618,-1.919)
N1: (-13.654,43.850,-2.840)
N3: (-14.656,44.042,-0.656)
N6: (-11.649,44.849,-3.419)
N7: (-11.618,45.919,-0.537)
N9: (-13.303,45.408,0.856)
O5': (-10.846,45.461,4.077)
O3': (-13.738,43.152,4.912)
OP2: (-9.118,45.166,5.859)
C3': (-13.305,43.958,3.823)
C1': (-14.097,45.390,2.085)
C5': (-11.936,45.813,4.915)
O4': (-13.426,46.176,3.051)
C8: (-12.115,46.058,0.669)
O2': (-15.664,43.965,3.194)
C6: (-12.594,44.613,-2.503)
C5: (-12.543,45.124,-1.191)
C4: (-13.590,44.799,-0.349)
P: (-9.352,45.792,4.538)
C4': (-13.244,45.411,4.265)
C2': (-14.341,44.015,2.703)
C2: (-14.596,43.618,-1.919)
N1: (-13.654,43.850,-2.840)
N3: (-14.656,44.042,-0.656)
N6: (-11.649,44.849,-3.419)
N7: (-11.618,45.919,-0.537)
N9: (-13.303,45.408,0.856)
O5': (-10.846,45.461,4.077)
O3': (-13.738,43.152,4.912)
Image (generated by PyMOL):