Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A493:A516
Extra
PDB:
ATOM 1 O3' A A 492 37.653-102.958 -44.978 1.00 34.92 O
ATOM 2 P A A 493 37.282-101.620 -44.199 1.00 44.01 P
ATOM 3 OP1 A A 493 36.307-100.882 -45.031 1.00 37.49 O
ATOM 4 OP2 A A 493 38.560-100.952 -43.859 1.00 42.64 O
ATOM 5 O5' A A 493 36.559-102.180 -42.879 1.00 36.98 O
ATOM 6 C5' A A 493 35.346-101.593 -42.406 1.00 42.62 C
ATOM 7 C4' A A 493 34.823-102.273 -41.165 1.00 40.05 C
ATOM 8 O4' A A 493 35.943-102.741 -40.373 1.00 33.42 O
ATOM 9 C3' A A 493 34.004-101.369 -40.235 1.00 42.42 C
ATOM 10 O3' A A 493 33.031-102.139 -39.524 1.00 55.51 O
ATOM 11 C2' A A 493 35.052-100.939 -39.229 1.00 43.16 C
ATOM 12 O2' A A 493 34.522-100.494 -37.999 1.00 56.29 O
ATOM 13 C1' A A 493 35.799-102.248 -39.066 1.00 37.74 C
ATOM 14 N9 A A 493 37.113-102.139 -38.433 1.00 40.67 N
ATOM 15 C8 A A 493 38.119-101.221 -38.585 1.00 39.44 C
ATOM 16 N7 A A 493 39.152-101.470 -37.797 1.00 42.68 N
ATOM 17 C5 A A 493 38.807-102.608 -37.072 1.00 42.71 C
ATOM 18 C6 A A 493 39.455-103.385 -36.073 1.00 40.48 C
ATOM 19 N6 A A 493 40.667-103.131 -35.568 1.00 34.40 N
ATOM 20 N1 A A 493 38.802-104.465 -35.585 1.00 35.82 N
ATOM 21 C2 A A 493 37.586-104.740 -36.053 1.00 36.07 C
ATOM 22 N3 A A 493 36.882-104.091 -36.978 1.00 38.53 N
ATOM 23 C4 A A 493 37.543-103.021 -37.457 1.00 42.87 C
ATOM 24 P A A 494 31.895-103.006 -40.258 1.00 43.03 P
ATOM 25 OP1 A A 494 32.185-103.006 -41.712 1.00 37.77 O
ATOM 26 OP2 A A 494 30.588-102.473 -39.773 1.00 46.79 O
ATOM 27 O5' A A 494 32.146-104.457 -39.663 1.00 32.42 O
TER
ATOM 1 O3' A B 515 47.976-112.119 -31.207 1.00 38.79 O
ATOM 2 P A B 516 46.961-111.949 -29.971 1.00 45.35 P
ATOM 3 OP1 A B 516 47.772-112.082 -28.730 1.00 41.28 O
ATOM 4 OP2 A B 516 45.824-112.891 -30.181 1.00 54.00 O
ATOM 5 O5' A B 516 46.447-110.452 -30.132 1.00 41.28 O
ATOM 6 C5' A B 516 47.336-109.364 -30.039 1.00 42.15 C
ATOM 7 C4' A B 516 46.667-108.145 -29.458 1.00 49.12 C
ATOM 8 O4' A B 516 45.741-107.585 -30.430 1.00 46.53 O
ATOM 9 C3' A B 516 45.869-108.368 -28.168 1.00 47.19 C
ATOM 10 O3' A B 516 46.174-107.336 -27.225 1.00 58.94 O
ATOM 11 C2' A B 516 44.421-108.218 -28.622 1.00 53.24 C
ATOM 12 O2' A B 516 43.539-107.734 -27.625 1.00 65.79 O
ATOM 13 C1' A B 516 44.553-107.235 -29.778 1.00 45.86 C
ATOM 14 N9 A B 516 43.441-107.300 -30.731 1.00 46.91 N
ATOM 15 C8 A B 516 42.541-108.331 -30.879 1.00 43.66 C
ATOM 16 N7 A B 516 41.613-108.083 -31.767 1.00 44.89 N
ATOM 17 C5 A B 516 41.900-106.797 -32.201 1.00 37.04 C
ATOM 18 C6 A B 516 41.276-105.972 -33.137 1.00 36.66 C
ATOM 19 N6 A B 516 40.185-106.316 -33.834 1.00 35.58 N
ATOM 20 N1 A B 516 41.839-104.768 -33.339 1.00 40.71 N
ATOM 21 C2 A B 516 42.930-104.446 -32.640 1.00 37.98 C
ATOM 22 N3 A B 516 43.597-105.131 -31.730 1.00 35.24 N
ATOM 23 C4 A B 516 43.017-106.306 -31.563 1.00 38.66 C
ATOM 24 P U B 517 46.784-107.711 -25.782 1.00 46.76 P
ATOM 25 OP1 U B 517 46.967-109.194 -25.749 1.00 77.15 O
ATOM 26 OP2 U B 517 45.911-107.071 -24.767 1.00 84.77 O
ATOM 27 O5' U B 517 48.198-107.000 -25.806 1.00104.83 O
TER
ATOM 2 P A A 493 37.282-101.620 -44.199 1.00 44.01 P
ATOM 3 OP1 A A 493 36.307-100.882 -45.031 1.00 37.49 O
ATOM 4 OP2 A A 493 38.560-100.952 -43.859 1.00 42.64 O
ATOM 5 O5' A A 493 36.559-102.180 -42.879 1.00 36.98 O
ATOM 6 C5' A A 493 35.346-101.593 -42.406 1.00 42.62 C
ATOM 7 C4' A A 493 34.823-102.273 -41.165 1.00 40.05 C
ATOM 8 O4' A A 493 35.943-102.741 -40.373 1.00 33.42 O
ATOM 9 C3' A A 493 34.004-101.369 -40.235 1.00 42.42 C
ATOM 10 O3' A A 493 33.031-102.139 -39.524 1.00 55.51 O
ATOM 11 C2' A A 493 35.052-100.939 -39.229 1.00 43.16 C
ATOM 12 O2' A A 493 34.522-100.494 -37.999 1.00 56.29 O
ATOM 13 C1' A A 493 35.799-102.248 -39.066 1.00 37.74 C
ATOM 14 N9 A A 493 37.113-102.139 -38.433 1.00 40.67 N
ATOM 15 C8 A A 493 38.119-101.221 -38.585 1.00 39.44 C
ATOM 16 N7 A A 493 39.152-101.470 -37.797 1.00 42.68 N
ATOM 17 C5 A A 493 38.807-102.608 -37.072 1.00 42.71 C
ATOM 18 C6 A A 493 39.455-103.385 -36.073 1.00 40.48 C
ATOM 19 N6 A A 493 40.667-103.131 -35.568 1.00 34.40 N
ATOM 20 N1 A A 493 38.802-104.465 -35.585 1.00 35.82 N
ATOM 21 C2 A A 493 37.586-104.740 -36.053 1.00 36.07 C
ATOM 22 N3 A A 493 36.882-104.091 -36.978 1.00 38.53 N
ATOM 23 C4 A A 493 37.543-103.021 -37.457 1.00 42.87 C
ATOM 24 P A A 494 31.895-103.006 -40.258 1.00 43.03 P
ATOM 25 OP1 A A 494 32.185-103.006 -41.712 1.00 37.77 O
ATOM 26 OP2 A A 494 30.588-102.473 -39.773 1.00 46.79 O
ATOM 27 O5' A A 494 32.146-104.457 -39.663 1.00 32.42 O
TER
ATOM 1 O3' A B 515 47.976-112.119 -31.207 1.00 38.79 O
ATOM 2 P A B 516 46.961-111.949 -29.971 1.00 45.35 P
ATOM 3 OP1 A B 516 47.772-112.082 -28.730 1.00 41.28 O
ATOM 4 OP2 A B 516 45.824-112.891 -30.181 1.00 54.00 O
ATOM 5 O5' A B 516 46.447-110.452 -30.132 1.00 41.28 O
ATOM 6 C5' A B 516 47.336-109.364 -30.039 1.00 42.15 C
ATOM 7 C4' A B 516 46.667-108.145 -29.458 1.00 49.12 C
ATOM 8 O4' A B 516 45.741-107.585 -30.430 1.00 46.53 O
ATOM 9 C3' A B 516 45.869-108.368 -28.168 1.00 47.19 C
ATOM 10 O3' A B 516 46.174-107.336 -27.225 1.00 58.94 O
ATOM 11 C2' A B 516 44.421-108.218 -28.622 1.00 53.24 C
ATOM 12 O2' A B 516 43.539-107.734 -27.625 1.00 65.79 O
ATOM 13 C1' A B 516 44.553-107.235 -29.778 1.00 45.86 C
ATOM 14 N9 A B 516 43.441-107.300 -30.731 1.00 46.91 N
ATOM 15 C8 A B 516 42.541-108.331 -30.879 1.00 43.66 C
ATOM 16 N7 A B 516 41.613-108.083 -31.767 1.00 44.89 N
ATOM 17 C5 A B 516 41.900-106.797 -32.201 1.00 37.04 C
ATOM 18 C6 A B 516 41.276-105.972 -33.137 1.00 36.66 C
ATOM 19 N6 A B 516 40.185-106.316 -33.834 1.00 35.58 N
ATOM 20 N1 A B 516 41.839-104.768 -33.339 1.00 40.71 N
ATOM 21 C2 A B 516 42.930-104.446 -32.640 1.00 37.98 C
ATOM 22 N3 A B 516 43.597-105.131 -31.730 1.00 35.24 N
ATOM 23 C4 A B 516 43.017-106.306 -31.563 1.00 38.66 C
ATOM 24 P U B 517 46.784-107.711 -25.782 1.00 46.76 P
ATOM 25 OP1 U B 517 46.967-109.194 -25.749 1.00 77.15 O
ATOM 26 OP2 U B 517 45.911-107.071 -24.767 1.00 84.77 O
ATOM 27 O5' U B 517 48.198-107.000 -25.806 1.00104.83 O
TER
Atoms:
OP1: (36.307,-100.882,-45.031)
OP2: (38.560,-100.952,-43.859)
C3': (34.004,-101.369,-40.235)
C1': (35.799,-102.248,-39.066)
C5': (35.346,-101.593,-42.406)
O4': (35.943,-102.741,-40.373)
C8: (38.119,-101.221,-38.585)
O2': (34.522,-100.494,-37.999)
C6: (39.455,-103.385,-36.073)
C5: (38.807,-102.608,-37.072)
C4: (37.543,-103.021,-37.457)
P: (37.282,-101.620,-44.199)
C4': (34.823,-102.273,-41.165)
C2': (35.052,-100.939,-39.229)
C2: (37.586,-104.740,-36.053)
N1: (38.802,-104.465,-35.585)
N3: (36.882,-104.091,-36.978)
N6: (40.667,-103.131,-35.568)
N7: (39.152,-101.470,-37.797)
N9: (37.113,-102.139,-38.433)
O5': (36.559,-102.180,-42.879)
O3': (33.031,-102.139,-39.524)
OP2: (38.560,-100.952,-43.859)
C3': (34.004,-101.369,-40.235)
C1': (35.799,-102.248,-39.066)
C5': (35.346,-101.593,-42.406)
O4': (35.943,-102.741,-40.373)
C8: (38.119,-101.221,-38.585)
O2': (34.522,-100.494,-37.999)
C6: (39.455,-103.385,-36.073)
C5: (38.807,-102.608,-37.072)
C4: (37.543,-103.021,-37.457)
P: (37.282,-101.620,-44.199)
C4': (34.823,-102.273,-41.165)
C2': (35.052,-100.939,-39.229)
C2: (37.586,-104.740,-36.053)
N1: (38.802,-104.465,-35.585)
N3: (36.882,-104.091,-36.978)
N6: (40.667,-103.131,-35.568)
N7: (39.152,-101.470,-37.797)
N9: (37.113,-102.139,-38.433)
O5': (36.559,-102.180,-42.879)
O3': (33.031,-102.139,-39.524)
OP1: (47.772,-112.082,-28.730)
OP2: (45.824,-112.891,-30.181)
C3': (45.869,-108.368,-28.168)
C1': (44.553,-107.235,-29.778)
C5': (47.336,-109.364,-30.039)
O4': (45.741,-107.585,-30.430)
C8: (42.541,-108.331,-30.879)
O2': (43.539,-107.734,-27.625)
C6: (41.276,-105.972,-33.137)
C5: (41.900,-106.797,-32.201)
C4: (43.017,-106.306,-31.563)
P: (46.961,-111.949,-29.971)
C4': (46.667,-108.145,-29.458)
C2': (44.421,-108.218,-28.622)
C2: (42.930,-104.446,-32.640)
N1: (41.839,-104.768,-33.339)
N3: (43.597,-105.131,-31.730)
N6: (40.185,-106.316,-33.834)
N7: (41.613,-108.083,-31.767)
N9: (43.441,-107.300,-30.731)
O5': (46.447,-110.452,-30.132)
O3': (46.174,-107.336,-27.225)
OP2: (45.824,-112.891,-30.181)
C3': (45.869,-108.368,-28.168)
C1': (44.553,-107.235,-29.778)
C5': (47.336,-109.364,-30.039)
O4': (45.741,-107.585,-30.430)
C8: (42.541,-108.331,-30.879)
O2': (43.539,-107.734,-27.625)
C6: (41.276,-105.972,-33.137)
C5: (41.900,-106.797,-32.201)
C4: (43.017,-106.306,-31.563)
P: (46.961,-111.949,-29.971)
C4': (46.667,-108.145,-29.458)
C2': (44.421,-108.218,-28.622)
C2: (42.930,-104.446,-32.640)
N1: (41.839,-104.768,-33.339)
N3: (43.597,-105.131,-31.730)
N6: (40.185,-106.316,-33.834)
N7: (41.613,-108.083,-31.767)
N9: (43.441,-107.300,-30.731)
O5': (46.447,-110.452,-30.132)
O3': (46.174,-107.336,-27.225)
Image (generated by PyMOL):