Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0473:0497
Extra
PDB:
ATOM 1 O3' A A 472 22.882 156.499 45.361 1.00 52.60 O
ATOM 2 P A A 473 24.317 157.039 45.853 1.00 53.63 P
ATOM 3 OP1 A A 473 24.939 157.700 44.680 1.00 52.07 O
ATOM 4 OP2 A A 473 25.028 155.924 46.521 1.00 52.76 O
ATOM 5 O5' A A 473 23.974 158.168 46.930 1.00 52.93 O
ATOM 6 C5' A A 473 24.926 159.207 47.239 1.00 54.75 C
ATOM 7 C4' A A 473 24.336 160.209 48.212 1.00 56.80 C
ATOM 8 O4' A A 473 23.827 159.517 49.391 1.00 56.05 O
ATOM 9 C3' A A 473 25.345 161.238 48.736 1.00 58.56 C
ATOM 10 O3' A A 473 24.701 162.454 49.132 1.00 61.29 O
ATOM 11 C2' A A 473 25.788 160.590 50.042 1.00 58.70 C
ATOM 12 O2' A A 473 26.348 161.504 50.964 1.00 59.02 O
ATOM 13 C1' A A 473 24.445 160.061 50.537 1.00 56.54 C
ATOM 14 N9 A A 473 24.480 159.066 51.607 1.00 54.18 N
ATOM 15 C8 A A 473 25.225 157.921 51.725 1.00 53.32 C
ATOM 16 N7 A A 473 25.017 157.271 52.843 1.00 52.86 N
ATOM 17 C5 A A 473 24.065 158.038 53.502 1.00 52.64 C
ATOM 18 C6 A A 473 23.419 157.892 54.743 1.00 52.51 C
ATOM 19 N6 A A 473 23.646 156.883 55.580 1.00 52.30 N
ATOM 20 N1 A A 473 22.520 158.833 55.100 1.00 53.20 N
ATOM 21 C2 A A 473 22.297 159.852 54.266 1.00 53.37 C
ATOM 22 N3 A A 473 22.840 160.100 53.077 1.00 53.24 N
ATOM 23 C4 A A 473 23.725 159.143 52.750 1.00 53.21 C
ATOM 24 P A A 474 24.096 163.464 48.036 1.00 62.86 P
ATOM 25 OP1 A A 474 24.253 162.875 46.666 1.00 59.96 O
ATOM 26 OP2 A A 474 24.652 164.812 48.324 1.00 61.25 O
ATOM 27 O5' A A 474 22.553 163.510 48.434 1.00 59.05 O
TER
ATOM 1 O3' A B 496 14.490 152.883 62.777 1.00 63.14 O
ATOM 2 P A B 497 14.685 154.302 63.498 1.00 64.29 P
ATOM 3 OP1 A B 497 13.995 154.245 64.804 1.00 66.48 O
ATOM 4 OP2 A B 497 14.352 155.375 62.538 1.00 64.43 O
ATOM 5 O5' A B 497 16.228 154.358 63.851 1.00 64.80 O
ATOM 6 C5' A B 497 17.197 154.457 62.830 1.00 67.62 C
ATOM 7 C4' A B 497 18.559 154.431 63.437 1.00 69.77 C
ATOM 8 O4' A B 497 19.537 154.673 62.400 1.00 70.24 O
ATOM 9 C3' A B 497 18.801 155.490 64.499 1.00 71.60 C
ATOM 10 O3' A B 497 19.724 155.020 65.465 1.00 75.08 O
ATOM 11 C2' A B 497 19.344 156.664 63.698 1.00 72.01 C
ATOM 12 O2' A B 497 20.251 157.459 64.440 1.00 73.16 O
ATOM 13 C1' A B 497 20.057 155.976 62.531 1.00 70.71 C
ATOM 14 N9 A B 497 19.851 156.680 61.262 1.00 68.95 N
ATOM 15 C8 A B 497 18.861 157.573 60.931 1.00 68.29 C
ATOM 16 N7 A B 497 19.008 158.106 59.746 1.00 68.41 N
ATOM 17 C5 A B 497 20.158 157.510 59.253 1.00 68.31 C
ATOM 18 C6 A B 497 20.864 157.666 58.049 1.00 68.79 C
ATOM 19 N6 A B 497 20.522 158.523 57.088 1.00 70.50 N
ATOM 20 N1 A B 497 21.959 156.907 57.865 1.00 68.37 N
ATOM 21 C2 A B 497 22.322 156.065 58.832 1.00 68.21 C
ATOM 22 N3 A B 497 21.754 155.841 60.010 1.00 68.05 N
ATOM 23 C4 A B 497 20.666 156.607 60.162 1.00 68.06 C
ATOM 24 P U B 498 19.334 155.074 67.025 1.00 76.44 P
ATOM 25 OP1 U B 498 17.956 154.533 67.183 1.00 75.72 O
ATOM 26 OP2 U B 498 19.644 156.432 67.526 1.00 76.48 O
ATOM 27 O5' U B 498 20.345 154.049 67.708 1.00 79.70 O
TER
ATOM 2 P A A 473 24.317 157.039 45.853 1.00 53.63 P
ATOM 3 OP1 A A 473 24.939 157.700 44.680 1.00 52.07 O
ATOM 4 OP2 A A 473 25.028 155.924 46.521 1.00 52.76 O
ATOM 5 O5' A A 473 23.974 158.168 46.930 1.00 52.93 O
ATOM 6 C5' A A 473 24.926 159.207 47.239 1.00 54.75 C
ATOM 7 C4' A A 473 24.336 160.209 48.212 1.00 56.80 C
ATOM 8 O4' A A 473 23.827 159.517 49.391 1.00 56.05 O
ATOM 9 C3' A A 473 25.345 161.238 48.736 1.00 58.56 C
ATOM 10 O3' A A 473 24.701 162.454 49.132 1.00 61.29 O
ATOM 11 C2' A A 473 25.788 160.590 50.042 1.00 58.70 C
ATOM 12 O2' A A 473 26.348 161.504 50.964 1.00 59.02 O
ATOM 13 C1' A A 473 24.445 160.061 50.537 1.00 56.54 C
ATOM 14 N9 A A 473 24.480 159.066 51.607 1.00 54.18 N
ATOM 15 C8 A A 473 25.225 157.921 51.725 1.00 53.32 C
ATOM 16 N7 A A 473 25.017 157.271 52.843 1.00 52.86 N
ATOM 17 C5 A A 473 24.065 158.038 53.502 1.00 52.64 C
ATOM 18 C6 A A 473 23.419 157.892 54.743 1.00 52.51 C
ATOM 19 N6 A A 473 23.646 156.883 55.580 1.00 52.30 N
ATOM 20 N1 A A 473 22.520 158.833 55.100 1.00 53.20 N
ATOM 21 C2 A A 473 22.297 159.852 54.266 1.00 53.37 C
ATOM 22 N3 A A 473 22.840 160.100 53.077 1.00 53.24 N
ATOM 23 C4 A A 473 23.725 159.143 52.750 1.00 53.21 C
ATOM 24 P A A 474 24.096 163.464 48.036 1.00 62.86 P
ATOM 25 OP1 A A 474 24.253 162.875 46.666 1.00 59.96 O
ATOM 26 OP2 A A 474 24.652 164.812 48.324 1.00 61.25 O
ATOM 27 O5' A A 474 22.553 163.510 48.434 1.00 59.05 O
TER
ATOM 1 O3' A B 496 14.490 152.883 62.777 1.00 63.14 O
ATOM 2 P A B 497 14.685 154.302 63.498 1.00 64.29 P
ATOM 3 OP1 A B 497 13.995 154.245 64.804 1.00 66.48 O
ATOM 4 OP2 A B 497 14.352 155.375 62.538 1.00 64.43 O
ATOM 5 O5' A B 497 16.228 154.358 63.851 1.00 64.80 O
ATOM 6 C5' A B 497 17.197 154.457 62.830 1.00 67.62 C
ATOM 7 C4' A B 497 18.559 154.431 63.437 1.00 69.77 C
ATOM 8 O4' A B 497 19.537 154.673 62.400 1.00 70.24 O
ATOM 9 C3' A B 497 18.801 155.490 64.499 1.00 71.60 C
ATOM 10 O3' A B 497 19.724 155.020 65.465 1.00 75.08 O
ATOM 11 C2' A B 497 19.344 156.664 63.698 1.00 72.01 C
ATOM 12 O2' A B 497 20.251 157.459 64.440 1.00 73.16 O
ATOM 13 C1' A B 497 20.057 155.976 62.531 1.00 70.71 C
ATOM 14 N9 A B 497 19.851 156.680 61.262 1.00 68.95 N
ATOM 15 C8 A B 497 18.861 157.573 60.931 1.00 68.29 C
ATOM 16 N7 A B 497 19.008 158.106 59.746 1.00 68.41 N
ATOM 17 C5 A B 497 20.158 157.510 59.253 1.00 68.31 C
ATOM 18 C6 A B 497 20.864 157.666 58.049 1.00 68.79 C
ATOM 19 N6 A B 497 20.522 158.523 57.088 1.00 70.50 N
ATOM 20 N1 A B 497 21.959 156.907 57.865 1.00 68.37 N
ATOM 21 C2 A B 497 22.322 156.065 58.832 1.00 68.21 C
ATOM 22 N3 A B 497 21.754 155.841 60.010 1.00 68.05 N
ATOM 23 C4 A B 497 20.666 156.607 60.162 1.00 68.06 C
ATOM 24 P U B 498 19.334 155.074 67.025 1.00 76.44 P
ATOM 25 OP1 U B 498 17.956 154.533 67.183 1.00 75.72 O
ATOM 26 OP2 U B 498 19.644 156.432 67.526 1.00 76.48 O
ATOM 27 O5' U B 498 20.345 154.049 67.708 1.00 79.70 O
TER
Atoms:
OP1: (24.939,157.700,44.680)
OP2: (25.028,155.924,46.521)
C3': (25.345,161.238,48.736)
C1': (24.445,160.061,50.537)
C5': (24.926,159.207,47.239)
O4': (23.827,159.517,49.391)
C8: (25.225,157.921,51.725)
O2': (26.348,161.504,50.964)
C6: (23.419,157.892,54.743)
C5: (24.065,158.038,53.502)
C4: (23.725,159.143,52.750)
P: (24.317,157.039,45.853)
C4': (24.336,160.209,48.212)
C2': (25.788,160.590,50.042)
C2: (22.297,159.852,54.266)
N1: (22.520,158.833,55.100)
N3: (22.840,160.100,53.077)
N6: (23.646,156.883,55.580)
N7: (25.017,157.271,52.843)
N9: (24.480,159.066,51.607)
O5': (23.974,158.168,46.930)
O3': (24.701,162.454,49.132)
OP2: (25.028,155.924,46.521)
C3': (25.345,161.238,48.736)
C1': (24.445,160.061,50.537)
C5': (24.926,159.207,47.239)
O4': (23.827,159.517,49.391)
C8: (25.225,157.921,51.725)
O2': (26.348,161.504,50.964)
C6: (23.419,157.892,54.743)
C5: (24.065,158.038,53.502)
C4: (23.725,159.143,52.750)
P: (24.317,157.039,45.853)
C4': (24.336,160.209,48.212)
C2': (25.788,160.590,50.042)
C2: (22.297,159.852,54.266)
N1: (22.520,158.833,55.100)
N3: (22.840,160.100,53.077)
N6: (23.646,156.883,55.580)
N7: (25.017,157.271,52.843)
N9: (24.480,159.066,51.607)
O5': (23.974,158.168,46.930)
O3': (24.701,162.454,49.132)
OP1: (13.995,154.245,64.804)
OP2: (14.352,155.375,62.538)
C3': (18.801,155.490,64.499)
C1': (20.057,155.976,62.531)
C5': (17.197,154.457,62.830)
O4': (19.537,154.673,62.400)
C8: (18.861,157.573,60.931)
O2': (20.251,157.459,64.440)
C6: (20.864,157.666,58.049)
C5: (20.158,157.510,59.253)
C4: (20.666,156.607,60.162)
P: (14.685,154.302,63.498)
C4': (18.559,154.431,63.437)
C2': (19.344,156.664,63.698)
C2: (22.322,156.065,58.832)
N1: (21.959,156.907,57.865)
N3: (21.754,155.841,60.010)
N6: (20.522,158.523,57.088)
N7: (19.008,158.106,59.746)
N9: (19.851,156.680,61.262)
O5': (16.228,154.358,63.851)
O3': (19.724,155.020,65.465)
OP2: (14.352,155.375,62.538)
C3': (18.801,155.490,64.499)
C1': (20.057,155.976,62.531)
C5': (17.197,154.457,62.830)
O4': (19.537,154.673,62.400)
C8: (18.861,157.573,60.931)
O2': (20.251,157.459,64.440)
C6: (20.864,157.666,58.049)
C5: (20.158,157.510,59.253)
C4: (20.666,156.607,60.162)
P: (14.685,154.302,63.498)
C4': (18.559,154.431,63.437)
C2': (19.344,156.664,63.698)
C2: (22.322,156.065,58.832)
N1: (21.959,156.907,57.865)
N3: (21.754,155.841,60.010)
N6: (20.522,158.523,57.088)
N7: (19.008,158.106,59.746)
N9: (19.851,156.680,61.262)
O5': (16.228,154.358,63.851)
O3': (19.724,155.020,65.465)
Image (generated by PyMOL):