Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DW6:A12:A13
Extra
PDB:
ATOM 1 O3' C A 11 0.176 40.852 -4.135 1.00 8.16 O
ATOM 2 P G A 12 1.244 39.665 -4.299 1.00 8.41 P
ATOM 3 OP1 G A 12 1.454 39.103 -2.948 1.00 9.14 O
ATOM 4 OP2 G A 12 2.399 40.151 -5.087 1.00 9.28 O
ATOM 5 O5' G A 12 0.488 38.598 -5.215 1.00 8.66 O
ATOM 6 C5' G A 12 -0.572 37.810 -4.695 1.00 8.88 C
ATOM 7 C4' G A 12 -1.095 36.895 -5.783 1.00 8.59 C
ATOM 8 O4' G A 12 -1.653 37.706 -6.843 1.00 8.35 O
ATOM 9 C3' G A 12 -0.033 36.071 -6.491 1.00 8.94 C
ATOM 10 O3' G A 12 0.309 34.917 -5.716 1.00 9.31 O
ATOM 11 C2' G A 12 -0.764 35.742 -7.792 1.00 8.70 C
ATOM 12 O2' G A 12 -1.650 34.652 -7.648 1.00 8.95 O
ATOM 13 C1' G A 12 -1.496 37.061 -8.085 1.00 8.58 C
ATOM 14 N9 G A 12 -0.614 37.824 -8.947 1.00 8.29 N
ATOM 15 C8 G A 12 0.269 38.836 -8.652 1.00 8.83 C
ATOM 16 N7 G A 12 0.949 39.235 -9.697 1.00 8.77 N
ATOM 17 C5 G A 12 0.505 38.419 -10.734 1.00 8.59 C
ATOM 18 C6 G A 12 0.869 38.357 -12.101 1.00 8.75 C
ATOM 19 O6 G A 12 1.701 39.036 -12.714 1.00 10.04 O
ATOM 20 N1 G A 12 0.163 37.362 -12.772 1.00 8.31 N
ATOM 21 C2 G A 12 -0.784 36.540 -12.213 1.00 7.96 C
ATOM 22 N2 G A 12 -1.364 35.638 -13.018 1.00 8.22 N
ATOM 23 N3 G A 12 -1.138 36.596 -10.943 1.00 8.23 N
ATOM 24 C4 G A 12 -0.450 37.548 -10.275 1.00 8.51 C
ATOM 25 P A A 13 1.850 34.560 -5.465 1.00 10.00 P
ATOM 26 OP1 A A 13 1.881 33.311 -4.672 1.00 11.14 O
ATOM 27 OP2 A A 13 2.565 35.756 -4.959 1.00 10.65 O
ATOM 28 O5' A A 13 2.326 34.259 -6.963 1.00 10.07 O
TER
ATOM 1 O3' G B 12 0.309 34.917 -5.716 1.00 9.31 O
ATOM 2 P A B 13 1.850 34.560 -5.465 1.00 10.00 P
ATOM 3 OP1 A B 13 1.881 33.311 -4.672 1.00 11.14 O
ATOM 4 OP2 A B 13 2.565 35.756 -4.959 1.00 10.65 O
ATOM 5 O5' A B 13 2.326 34.259 -6.963 1.00 10.07 O
ATOM 6 C5' A B 13 3.708 34.219 -7.278 1.00 10.69 C
ATOM 7 C4' A B 13 4.007 33.043 -8.188 1.00 10.26 C
ATOM 8 O4' A B 13 3.635 31.820 -7.508 1.00 10.54 O
ATOM 9 C3' A B 13 3.224 32.990 -9.492 1.00 9.92 C
ATOM 10 O3' A B 13 3.841 33.804 -10.474 1.00 10.26 O
ATOM 11 C2' A B 13 3.382 31.516 -9.834 1.00 10.08 C
ATOM 12 O2' A B 13 4.694 31.214 -10.259 1.00 10.60 O
ATOM 13 C1' A B 13 3.167 30.889 -8.466 1.00 10.42 C
ATOM 14 N9 A B 13 1.792 30.508 -8.151 1.00 10.99 N
ATOM 15 C8 A B 13 0.924 31.111 -7.284 1.00 11.71 C
ATOM 16 N7 A B 13 -0.239 30.506 -7.201 1.00 12.08 N
ATOM 17 C5 A B 13 -0.120 29.430 -8.067 1.00 11.88 C
ATOM 18 C6 A B 13 -1.001 28.391 -8.432 1.00 12.30 C
ATOM 19 N6 A B 13 -2.239 28.269 -7.944 1.00 12.87 N
ATOM 20 N1 A B 13 -0.561 27.480 -9.324 1.00 12.49 N
ATOM 21 C2 A B 13 0.678 27.598 -9.810 1.00 12.92 C
ATOM 22 N3 A B 13 1.594 28.525 -9.541 1.00 12.29 N
ATOM 23 C4 A B 13 1.128 29.416 -8.655 1.00 11.49 C
ATOM 24 P G B 14 3.044 34.999 -11.184 1.00 9.29 P
ATOM 25 OP1 G B 14 4.055 35.770 -11.943 1.00 10.75 O
ATOM 26 OP2 G B 14 2.186 35.676 -10.191 1.00 9.86 O
ATOM 27 O5' G B 14 2.069 34.262 -12.208 1.00 9.63 O
TER
ATOM 2 P G A 12 1.244 39.665 -4.299 1.00 8.41 P
ATOM 3 OP1 G A 12 1.454 39.103 -2.948 1.00 9.14 O
ATOM 4 OP2 G A 12 2.399 40.151 -5.087 1.00 9.28 O
ATOM 5 O5' G A 12 0.488 38.598 -5.215 1.00 8.66 O
ATOM 6 C5' G A 12 -0.572 37.810 -4.695 1.00 8.88 C
ATOM 7 C4' G A 12 -1.095 36.895 -5.783 1.00 8.59 C
ATOM 8 O4' G A 12 -1.653 37.706 -6.843 1.00 8.35 O
ATOM 9 C3' G A 12 -0.033 36.071 -6.491 1.00 8.94 C
ATOM 10 O3' G A 12 0.309 34.917 -5.716 1.00 9.31 O
ATOM 11 C2' G A 12 -0.764 35.742 -7.792 1.00 8.70 C
ATOM 12 O2' G A 12 -1.650 34.652 -7.648 1.00 8.95 O
ATOM 13 C1' G A 12 -1.496 37.061 -8.085 1.00 8.58 C
ATOM 14 N9 G A 12 -0.614 37.824 -8.947 1.00 8.29 N
ATOM 15 C8 G A 12 0.269 38.836 -8.652 1.00 8.83 C
ATOM 16 N7 G A 12 0.949 39.235 -9.697 1.00 8.77 N
ATOM 17 C5 G A 12 0.505 38.419 -10.734 1.00 8.59 C
ATOM 18 C6 G A 12 0.869 38.357 -12.101 1.00 8.75 C
ATOM 19 O6 G A 12 1.701 39.036 -12.714 1.00 10.04 O
ATOM 20 N1 G A 12 0.163 37.362 -12.772 1.00 8.31 N
ATOM 21 C2 G A 12 -0.784 36.540 -12.213 1.00 7.96 C
ATOM 22 N2 G A 12 -1.364 35.638 -13.018 1.00 8.22 N
ATOM 23 N3 G A 12 -1.138 36.596 -10.943 1.00 8.23 N
ATOM 24 C4 G A 12 -0.450 37.548 -10.275 1.00 8.51 C
ATOM 25 P A A 13 1.850 34.560 -5.465 1.00 10.00 P
ATOM 26 OP1 A A 13 1.881 33.311 -4.672 1.00 11.14 O
ATOM 27 OP2 A A 13 2.565 35.756 -4.959 1.00 10.65 O
ATOM 28 O5' A A 13 2.326 34.259 -6.963 1.00 10.07 O
TER
ATOM 1 O3' G B 12 0.309 34.917 -5.716 1.00 9.31 O
ATOM 2 P A B 13 1.850 34.560 -5.465 1.00 10.00 P
ATOM 3 OP1 A B 13 1.881 33.311 -4.672 1.00 11.14 O
ATOM 4 OP2 A B 13 2.565 35.756 -4.959 1.00 10.65 O
ATOM 5 O5' A B 13 2.326 34.259 -6.963 1.00 10.07 O
ATOM 6 C5' A B 13 3.708 34.219 -7.278 1.00 10.69 C
ATOM 7 C4' A B 13 4.007 33.043 -8.188 1.00 10.26 C
ATOM 8 O4' A B 13 3.635 31.820 -7.508 1.00 10.54 O
ATOM 9 C3' A B 13 3.224 32.990 -9.492 1.00 9.92 C
ATOM 10 O3' A B 13 3.841 33.804 -10.474 1.00 10.26 O
ATOM 11 C2' A B 13 3.382 31.516 -9.834 1.00 10.08 C
ATOM 12 O2' A B 13 4.694 31.214 -10.259 1.00 10.60 O
ATOM 13 C1' A B 13 3.167 30.889 -8.466 1.00 10.42 C
ATOM 14 N9 A B 13 1.792 30.508 -8.151 1.00 10.99 N
ATOM 15 C8 A B 13 0.924 31.111 -7.284 1.00 11.71 C
ATOM 16 N7 A B 13 -0.239 30.506 -7.201 1.00 12.08 N
ATOM 17 C5 A B 13 -0.120 29.430 -8.067 1.00 11.88 C
ATOM 18 C6 A B 13 -1.001 28.391 -8.432 1.00 12.30 C
ATOM 19 N6 A B 13 -2.239 28.269 -7.944 1.00 12.87 N
ATOM 20 N1 A B 13 -0.561 27.480 -9.324 1.00 12.49 N
ATOM 21 C2 A B 13 0.678 27.598 -9.810 1.00 12.92 C
ATOM 22 N3 A B 13 1.594 28.525 -9.541 1.00 12.29 N
ATOM 23 C4 A B 13 1.128 29.416 -8.655 1.00 11.49 C
ATOM 24 P G B 14 3.044 34.999 -11.184 1.00 9.29 P
ATOM 25 OP1 G B 14 4.055 35.770 -11.943 1.00 10.75 O
ATOM 26 OP2 G B 14 2.186 35.676 -10.191 1.00 9.86 O
ATOM 27 O5' G B 14 2.069 34.262 -12.208 1.00 9.63 O
TER
Atoms:
OP1: (1.454,39.103,-2.948)
OP2: (2.399,40.151,-5.087)
C3': (-0.033,36.071,-6.491)
C1': (-1.496,37.061,-8.085)
C5': (-0.572,37.810,-4.695)
O6: (1.701,39.036,-12.714)
O4': (-1.653,37.706,-6.843)
C8: (0.269,38.836,-8.652)
C2: (-0.784,36.540,-12.213)
C6: (0.869,38.357,-12.101)
C5: (0.505,38.419,-10.734)
C4: (-0.450,37.548,-10.275)
P: (1.244,39.665,-4.299)
C4': (-1.095,36.895,-5.783)
C2': (-0.764,35.742,-7.792)
O2': (-1.650,34.652,-7.648)
N1: (0.163,37.362,-12.772)
N2: (-1.364,35.638,-13.018)
N3: (-1.138,36.596,-10.943)
N7: (0.949,39.235,-9.697)
N9: (-0.614,37.824,-8.947)
O5': (0.488,38.598,-5.215)
O3': (0.309,34.917,-5.716)
OP2: (2.399,40.151,-5.087)
C3': (-0.033,36.071,-6.491)
C1': (-1.496,37.061,-8.085)
C5': (-0.572,37.810,-4.695)
O6: (1.701,39.036,-12.714)
O4': (-1.653,37.706,-6.843)
C8: (0.269,38.836,-8.652)
C2: (-0.784,36.540,-12.213)
C6: (0.869,38.357,-12.101)
C5: (0.505,38.419,-10.734)
C4: (-0.450,37.548,-10.275)
P: (1.244,39.665,-4.299)
C4': (-1.095,36.895,-5.783)
C2': (-0.764,35.742,-7.792)
O2': (-1.650,34.652,-7.648)
N1: (0.163,37.362,-12.772)
N2: (-1.364,35.638,-13.018)
N3: (-1.138,36.596,-10.943)
N7: (0.949,39.235,-9.697)
N9: (-0.614,37.824,-8.947)
O5': (0.488,38.598,-5.215)
O3': (0.309,34.917,-5.716)
OP1: (1.881,33.311,-4.672)
OP2: (2.565,35.756,-4.959)
C3': (3.224,32.990,-9.492)
C1': (3.167,30.889,-8.466)
C5': (3.708,34.219,-7.278)
O4': (3.635,31.820,-7.508)
C8: (0.924,31.111,-7.284)
O2': (4.694,31.214,-10.259)
C6: (-1.001,28.391,-8.432)
C5: (-0.120,29.430,-8.067)
C4: (1.128,29.416,-8.655)
P: (1.850,34.560,-5.465)
C4': (4.007,33.043,-8.188)
C2': (3.382,31.516,-9.834)
C2: (0.678,27.598,-9.810)
N1: (-0.561,27.480,-9.324)
N3: (1.594,28.525,-9.541)
N6: (-2.239,28.269,-7.944)
N7: (-0.239,30.506,-7.201)
N9: (1.792,30.508,-8.151)
O5': (2.326,34.259,-6.963)
O3': (3.841,33.804,-10.474)
OP2: (2.565,35.756,-4.959)
C3': (3.224,32.990,-9.492)
C1': (3.167,30.889,-8.466)
C5': (3.708,34.219,-7.278)
O4': (3.635,31.820,-7.508)
C8: (0.924,31.111,-7.284)
O2': (4.694,31.214,-10.259)
C6: (-1.001,28.391,-8.432)
C5: (-0.120,29.430,-8.067)
C4: (1.128,29.416,-8.655)
P: (1.850,34.560,-5.465)
C4': (4.007,33.043,-8.188)
C2': (3.382,31.516,-9.834)
C2: (0.678,27.598,-9.810)
N1: (-0.561,27.480,-9.324)
N3: (1.594,28.525,-9.541)
N6: (-2.239,28.269,-7.944)
N7: (-0.239,30.506,-7.201)
N9: (1.792,30.508,-8.151)
O5': (2.326,34.259,-6.963)
O3': (3.841,33.804,-10.474)
Image (generated by PyMOL):