ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3E5E:A18:A19

Extra

PDB:
ATOM 1 O3' G A 17 21.198 8.606 -0.552 1.00 88.65 O
ATOM 2 P G A 18 22.725 8.243 -0.855 1.00 88.86 P
ATOM 3 OP1 G A 18 23.459 8.315 0.431 1.00 88.87 O
ATOM 4 OP2 G A 18 23.172 9.045 -2.020 1.00 88.45 O
ATOM 5 O5' G A 18 22.659 6.717 -1.333 1.00 88.47 O
ATOM 6 C5' G A 18 22.070 5.716 -0.502 1.00 87.63 C
ATOM 7 C4' G A 18 21.674 4.508 -1.331 1.00 86.88 C
ATOM 8 O4' G A 18 20.751 4.900 -2.382 1.00 85.99 O
ATOM 9 C3' G A 18 22.795 3.850 -2.125 1.00 86.80 C
ATOM 10 O3' G A 18 23.699 3.099 -1.313 1.00 87.55 O
ATOM 11 C2' G A 18 21.975 2.989 -3.074 1.00 86.04 C
ATOM 12 O2' G A 18 21.437 1.834 -2.457 1.00 86.12 O
ATOM 13 C1' G A 18 20.883 3.990 -3.468 1.00 85.06 C
ATOM 14 N9 G A 18 21.245 4.700 -4.699 1.00 83.08 N
ATOM 15 C8 G A 18 21.663 6.003 -4.829 1.00 82.24 C
ATOM 16 N7 G A 18 21.931 6.346 -6.059 1.00 81.49 N
ATOM 17 C5 G A 18 21.680 5.197 -6.792 1.00 81.58 C
ATOM 18 C6 G A 18 21.798 4.962 -8.186 1.00 81.77 C
ATOM 19 O6 G A 18 22.158 5.761 -9.067 1.00 82.13 O
ATOM 20 N1 G A 18 21.447 3.654 -8.531 1.00 81.45 N
ATOM 21 C2 G A 18 21.035 2.691 -7.635 1.00 81.08 C
ATOM 22 N2 G A 18 20.738 1.490 -8.149 1.00 80.63 N
ATOM 23 N3 G A 18 20.922 2.900 -6.328 1.00 81.22 N
ATOM 24 C4 G A 18 21.259 4.172 -5.974 1.00 81.99 C
ATOM 25 P A A 19 25.278 3.377 -1.436 1.00 87.79 P
ATOM 26 OP1 A A 19 25.928 2.701 -0.291 1.00 87.69 O
ATOM 27 OP2 A A 19 25.466 4.837 -1.632 1.00 87.56 O
ATOM 28 O5' A A 19 25.702 2.629 -2.790 1.00 87.13 O
TER

ATOM 1 O3' G B 18 23.699 3.099 -1.313 1.00 87.55 O
ATOM 2 P A B 19 25.278 3.377 -1.436 1.00 87.79 P
ATOM 3 OP1 A B 19 25.928 2.701 -0.291 1.00 87.69 O
ATOM 4 OP2 A B 19 25.466 4.837 -1.632 1.00 87.56 O
ATOM 5 O5' A B 19 25.702 2.629 -2.790 1.00 87.13 O
ATOM 6 C5' A B 19 26.660 3.217 -3.677 1.00 86.53 C
ATOM 7 C4' A B 19 27.274 2.191 -4.617 1.00 85.80 C
ATOM 8 O4' A B 19 27.716 1.047 -3.846 1.00 85.80 O
ATOM 9 C3' A B 19 26.333 1.610 -5.666 1.00 85.35 C
ATOM 10 O3' A B 19 26.345 2.369 -6.870 1.00 84.36 O
ATOM 11 C2' A B 19 26.915 0.225 -5.904 1.00 85.49 C
ATOM 12 O2' A B 19 28.040 0.247 -6.765 1.00 85.32 O
ATOM 13 C1' A B 19 27.327 -0.157 -4.486 1.00 85.63 C
ATOM 14 N9 A B 19 26.290 -0.826 -3.687 1.00 85.56 N
ATOM 15 C8 A B 19 25.625 -0.320 -2.599 1.00 85.43 C
ATOM 16 N7 A B 19 24.752 -1.142 -2.066 1.00 85.22 N
ATOM 17 C5 A B 19 24.851 -2.278 -2.855 1.00 85.25 C
ATOM 18 C6 A B 19 24.187 -3.525 -2.816 1.00 85.08 C
ATOM 19 N6 A B 19 23.254 -3.829 -1.906 1.00 84.73 N
ATOM 20 N1 A B 19 24.517 -4.449 -3.753 1.00 85.34 N
ATOM 21 C2 A B 19 25.450 -4.145 -4.671 1.00 85.40 C
ATOM 22 N3 A B 19 26.140 -3.008 -4.806 1.00 85.47 N
ATOM 23 C4 A B 19 25.794 -2.105 -3.861 1.00 85.50 C
ATOM 24 P A B 20 24.946 2.773 -7.536 1.00 83.08 P
ATOM 25 OP1 A B 20 25.235 3.466 -8.821 1.00 82.70 O
ATOM 26 OP2 A B 20 24.163 3.439 -6.467 1.00 82.74 O
ATOM 27 O5' A B 20 24.244 1.363 -7.827 1.00 81.32 O
TER

Atoms:
OP1: (23.459,8.315,0.431)
OP2: (23.172,9.045,-2.020)
C3': (22.795,3.850,-2.125)
C1': (20.883,3.990,-3.468)
C5': (22.070,5.716,-0.502)
O6: (22.158,5.761,-9.067)
O4': (20.751,4.900,-2.382)
C8: (21.663,6.003,-4.829)
C2: (21.035,2.691,-7.635)
C6: (21.798,4.962,-8.186)
C5: (21.680,5.197,-6.792)
C4: (21.259,4.172,-5.974)
P: (22.725,8.243,-0.855)
C4': (21.674,4.508,-1.331)
C2': (21.975,2.989,-3.074)
O2': (21.437,1.834,-2.457)
N1: (21.447,3.654,-8.531)
N2: (20.738,1.490,-8.149)
N3: (20.922,2.900,-6.328)
N7: (21.931,6.346,-6.059)
N9: (21.245,4.700,-4.699)
O5': (22.659,6.717,-1.333)
O3': (23.699,3.099,-1.313)
OP1: (25.928,2.701,-0.291)
OP2: (25.466,4.837,-1.632)
C3': (26.333,1.610,-5.666)
C1': (27.327,-0.157,-4.486)
C5': (26.660,3.217,-3.677)
O4': (27.716,1.047,-3.846)
C8: (25.625,-0.320,-2.599)
O2': (28.040,0.247,-6.765)
C6: (24.187,-3.525,-2.816)
C5: (24.851,-2.278,-2.855)
C4: (25.794,-2.105,-3.861)
P: (25.278,3.377,-1.436)
C4': (27.274,2.191,-4.617)
C2': (26.915,0.225,-5.904)
C2: (25.450,-4.145,-4.671)
N1: (24.517,-4.449,-3.753)
N3: (26.140,-3.008,-4.806)
N6: (23.254,-3.829,-1.906)
N7: (24.752,-1.142,-2.066)
N9: (26.290,-0.826,-3.687)
O5': (25.702,2.629,-2.790)
O3': (26.345,2.369,-6.870)
Image (generated by PyMOL):
PyMOL image
show in jmol