Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A493:A516
Extra
PDB:
ATOM 1 O3' A A 492 37.367-103.032 -45.000 1.00 35.04 O
ATOM 2 P A A 493 37.012-101.719 -44.175 1.00 44.50 P
ATOM 3 OP1 A A 493 36.130-100.901 -45.024 1.00 42.64 O
ATOM 4 OP2 A A 493 38.298-101.131 -43.731 1.00 54.01 O
ATOM 5 O5' A A 493 36.198-102.312 -42.919 1.00 45.26 O
ATOM 6 C5' A A 493 35.225-101.525 -42.217 1.00 48.02 C
ATOM 7 C4' A A 493 34.592-102.282 -41.061 1.00 38.15 C
ATOM 8 O4' A A 493 35.643-102.847 -40.244 1.00 29.82 O
ATOM 9 C3' A A 493 33.752-101.423 -40.115 1.00 38.14 C
ATOM 10 O3' A A 493 32.724-102.211 -39.488 1.00 56.11 O
ATOM 11 C2' A A 493 34.776-101.064 -39.048 1.00 37.60 C
ATOM 12 O2' A A 493 34.229-100.676 -37.807 1.00 48.79 O
ATOM 13 C1' A A 493 35.505-102.376 -38.928 1.00 38.03 C
ATOM 14 N9 A A 493 36.825-102.279 -38.305 1.00 45.27 N
ATOM 15 C8 A A 493 37.793-101.321 -38.417 1.00 38.81 C
ATOM 16 N7 A A 493 38.845-101.577 -37.676 1.00 42.53 N
ATOM 17 C5 A A 493 38.555-102.763 -37.021 1.00 40.85 C
ATOM 18 C6 A A 493 39.251-103.556 -36.083 1.00 38.49 C
ATOM 19 N6 A A 493 40.461-103.267 -35.599 1.00 32.39 N
ATOM 20 N1 A A 493 38.639-104.680 -35.628 1.00 37.79 N
ATOM 21 C2 A A 493 37.419-104.972 -36.078 1.00 36.62 C
ATOM 22 N3 A A 493 36.668-104.307 -36.948 1.00 39.76 N
ATOM 23 C4 A A 493 37.300-103.197 -37.388 1.00 44.69 C
ATOM 24 P A A 494 31.654-103.096 -40.314 1.00 49.53 P
ATOM 25 OP1 A A 494 32.058-103.090 -41.742 1.00 44.27 O
ATOM 26 OP2 A A 494 30.312-102.589 -39.944 1.00 54.41 O
ATOM 27 O5' A A 494 31.879-104.540 -39.700 1.00 31.51 O
TER
ATOM 1 O3' A B 515 47.716-112.176 -31.288 1.00 33.03 O
ATOM 2 P A B 516 46.669-112.103 -30.066 1.00 39.77 P
ATOM 3 OP1 A B 516 47.442-112.331 -28.817 1.00 38.00 O
ATOM 4 OP2 A B 516 45.556-113.025 -30.376 1.00 49.04 O
ATOM 5 O5' A B 516 46.155-110.599 -30.118 1.00 35.63 O
ATOM 6 C5' A B 516 47.045-109.527 -29.894 1.00 42.96 C
ATOM 7 C4' A B 516 46.347-108.310 -29.348 1.00 37.83 C
ATOM 8 O4' A B 516 45.483-107.747 -30.372 1.00 47.78 O
ATOM 9 C3' A B 516 45.477-108.539 -28.116 1.00 41.97 C
ATOM 10 O3' A B 516 45.711-107.506 -27.149 1.00 50.01 O
ATOM 11 C2' A B 516 44.057-108.424 -28.670 1.00 58.51 C
ATOM 12 O2' A B 516 43.077-107.992 -27.742 1.00 60.41 O
ATOM 13 C1' A B 516 44.243-107.431 -29.808 1.00 45.72 C
ATOM 14 N9 A B 516 43.208-107.533 -30.836 1.00 38.63 N
ATOM 15 C8 A B 516 42.446-108.635 -31.093 1.00 41.19 C
ATOM 16 N7 A B 516 41.533-108.433 -32.002 1.00 44.45 N
ATOM 17 C5 A B 516 41.689-107.098 -32.350 1.00 38.67 C
ATOM 18 C6 A B 516 41.008-106.282 -33.273 1.00 38.44 C
ATOM 19 N6 A B 516 39.987-106.679 -34.059 1.00 36.17 N
ATOM 20 N1 A B 516 41.430-105.015 -33.358 1.00 36.74 N
ATOM 21 C2 A B 516 42.442-104.643 -32.573 1.00 40.66 C
ATOM 22 N3 A B 516 43.154-105.312 -31.679 1.00 38.15 N
ATOM 23 C4 A B 516 42.712-106.546 -31.620 1.00 33.91 C
ATOM 24 P U B 517 46.613-107.818 -25.843 1.00 46.15 P
ATOM 25 OP1 U B 517 46.735-109.297 -25.730 1.00 72.49 O
ATOM 26 OP2 U B 517 46.034-107.062 -24.722 1.00 78.97 O
ATOM 27 O5' U B 517 48.023-107.201 -26.240 1.00102.14 O
TER
ATOM 2 P A A 493 37.012-101.719 -44.175 1.00 44.50 P
ATOM 3 OP1 A A 493 36.130-100.901 -45.024 1.00 42.64 O
ATOM 4 OP2 A A 493 38.298-101.131 -43.731 1.00 54.01 O
ATOM 5 O5' A A 493 36.198-102.312 -42.919 1.00 45.26 O
ATOM 6 C5' A A 493 35.225-101.525 -42.217 1.00 48.02 C
ATOM 7 C4' A A 493 34.592-102.282 -41.061 1.00 38.15 C
ATOM 8 O4' A A 493 35.643-102.847 -40.244 1.00 29.82 O
ATOM 9 C3' A A 493 33.752-101.423 -40.115 1.00 38.14 C
ATOM 10 O3' A A 493 32.724-102.211 -39.488 1.00 56.11 O
ATOM 11 C2' A A 493 34.776-101.064 -39.048 1.00 37.60 C
ATOM 12 O2' A A 493 34.229-100.676 -37.807 1.00 48.79 O
ATOM 13 C1' A A 493 35.505-102.376 -38.928 1.00 38.03 C
ATOM 14 N9 A A 493 36.825-102.279 -38.305 1.00 45.27 N
ATOM 15 C8 A A 493 37.793-101.321 -38.417 1.00 38.81 C
ATOM 16 N7 A A 493 38.845-101.577 -37.676 1.00 42.53 N
ATOM 17 C5 A A 493 38.555-102.763 -37.021 1.00 40.85 C
ATOM 18 C6 A A 493 39.251-103.556 -36.083 1.00 38.49 C
ATOM 19 N6 A A 493 40.461-103.267 -35.599 1.00 32.39 N
ATOM 20 N1 A A 493 38.639-104.680 -35.628 1.00 37.79 N
ATOM 21 C2 A A 493 37.419-104.972 -36.078 1.00 36.62 C
ATOM 22 N3 A A 493 36.668-104.307 -36.948 1.00 39.76 N
ATOM 23 C4 A A 493 37.300-103.197 -37.388 1.00 44.69 C
ATOM 24 P A A 494 31.654-103.096 -40.314 1.00 49.53 P
ATOM 25 OP1 A A 494 32.058-103.090 -41.742 1.00 44.27 O
ATOM 26 OP2 A A 494 30.312-102.589 -39.944 1.00 54.41 O
ATOM 27 O5' A A 494 31.879-104.540 -39.700 1.00 31.51 O
TER
ATOM 1 O3' A B 515 47.716-112.176 -31.288 1.00 33.03 O
ATOM 2 P A B 516 46.669-112.103 -30.066 1.00 39.77 P
ATOM 3 OP1 A B 516 47.442-112.331 -28.817 1.00 38.00 O
ATOM 4 OP2 A B 516 45.556-113.025 -30.376 1.00 49.04 O
ATOM 5 O5' A B 516 46.155-110.599 -30.118 1.00 35.63 O
ATOM 6 C5' A B 516 47.045-109.527 -29.894 1.00 42.96 C
ATOM 7 C4' A B 516 46.347-108.310 -29.348 1.00 37.83 C
ATOM 8 O4' A B 516 45.483-107.747 -30.372 1.00 47.78 O
ATOM 9 C3' A B 516 45.477-108.539 -28.116 1.00 41.97 C
ATOM 10 O3' A B 516 45.711-107.506 -27.149 1.00 50.01 O
ATOM 11 C2' A B 516 44.057-108.424 -28.670 1.00 58.51 C
ATOM 12 O2' A B 516 43.077-107.992 -27.742 1.00 60.41 O
ATOM 13 C1' A B 516 44.243-107.431 -29.808 1.00 45.72 C
ATOM 14 N9 A B 516 43.208-107.533 -30.836 1.00 38.63 N
ATOM 15 C8 A B 516 42.446-108.635 -31.093 1.00 41.19 C
ATOM 16 N7 A B 516 41.533-108.433 -32.002 1.00 44.45 N
ATOM 17 C5 A B 516 41.689-107.098 -32.350 1.00 38.67 C
ATOM 18 C6 A B 516 41.008-106.282 -33.273 1.00 38.44 C
ATOM 19 N6 A B 516 39.987-106.679 -34.059 1.00 36.17 N
ATOM 20 N1 A B 516 41.430-105.015 -33.358 1.00 36.74 N
ATOM 21 C2 A B 516 42.442-104.643 -32.573 1.00 40.66 C
ATOM 22 N3 A B 516 43.154-105.312 -31.679 1.00 38.15 N
ATOM 23 C4 A B 516 42.712-106.546 -31.620 1.00 33.91 C
ATOM 24 P U B 517 46.613-107.818 -25.843 1.00 46.15 P
ATOM 25 OP1 U B 517 46.735-109.297 -25.730 1.00 72.49 O
ATOM 26 OP2 U B 517 46.034-107.062 -24.722 1.00 78.97 O
ATOM 27 O5' U B 517 48.023-107.201 -26.240 1.00102.14 O
TER
Atoms:
OP1: (36.130,-100.901,-45.024)
OP2: (38.298,-101.131,-43.731)
C3': (33.752,-101.423,-40.115)
C1': (35.505,-102.376,-38.928)
C5': (35.225,-101.525,-42.217)
O4': (35.643,-102.847,-40.244)
C8: (37.793,-101.321,-38.417)
O2': (34.229,-100.676,-37.807)
C6: (39.251,-103.556,-36.083)
C5: (38.555,-102.763,-37.021)
C4: (37.300,-103.197,-37.388)
P: (37.012,-101.719,-44.175)
C4': (34.592,-102.282,-41.061)
C2': (34.776,-101.064,-39.048)
C2: (37.419,-104.972,-36.078)
N1: (38.639,-104.680,-35.628)
N3: (36.668,-104.307,-36.948)
N6: (40.461,-103.267,-35.599)
N7: (38.845,-101.577,-37.676)
N9: (36.825,-102.279,-38.305)
O5': (36.198,-102.312,-42.919)
O3': (32.724,-102.211,-39.488)
OP2: (38.298,-101.131,-43.731)
C3': (33.752,-101.423,-40.115)
C1': (35.505,-102.376,-38.928)
C5': (35.225,-101.525,-42.217)
O4': (35.643,-102.847,-40.244)
C8: (37.793,-101.321,-38.417)
O2': (34.229,-100.676,-37.807)
C6: (39.251,-103.556,-36.083)
C5: (38.555,-102.763,-37.021)
C4: (37.300,-103.197,-37.388)
P: (37.012,-101.719,-44.175)
C4': (34.592,-102.282,-41.061)
C2': (34.776,-101.064,-39.048)
C2: (37.419,-104.972,-36.078)
N1: (38.639,-104.680,-35.628)
N3: (36.668,-104.307,-36.948)
N6: (40.461,-103.267,-35.599)
N7: (38.845,-101.577,-37.676)
N9: (36.825,-102.279,-38.305)
O5': (36.198,-102.312,-42.919)
O3': (32.724,-102.211,-39.488)
OP1: (47.442,-112.331,-28.817)
OP2: (45.556,-113.025,-30.376)
C3': (45.477,-108.539,-28.116)
C1': (44.243,-107.431,-29.808)
C5': (47.045,-109.527,-29.894)
O4': (45.483,-107.747,-30.372)
C8: (42.446,-108.635,-31.093)
O2': (43.077,-107.992,-27.742)
C6: (41.008,-106.282,-33.273)
C5: (41.689,-107.098,-32.350)
C4: (42.712,-106.546,-31.620)
P: (46.669,-112.103,-30.066)
C4': (46.347,-108.310,-29.348)
C2': (44.057,-108.424,-28.670)
C2: (42.442,-104.643,-32.573)
N1: (41.430,-105.015,-33.358)
N3: (43.154,-105.312,-31.679)
N6: (39.987,-106.679,-34.059)
N7: (41.533,-108.433,-32.002)
N9: (43.208,-107.533,-30.836)
O5': (46.155,-110.599,-30.118)
O3': (45.711,-107.506,-27.149)
OP2: (45.556,-113.025,-30.376)
C3': (45.477,-108.539,-28.116)
C1': (44.243,-107.431,-29.808)
C5': (47.045,-109.527,-29.894)
O4': (45.483,-107.747,-30.372)
C8: (42.446,-108.635,-31.093)
O2': (43.077,-107.992,-27.742)
C6: (41.008,-106.282,-33.273)
C5: (41.689,-107.098,-32.350)
C4: (42.712,-106.546,-31.620)
P: (46.669,-112.103,-30.066)
C4': (46.347,-108.310,-29.348)
C2': (44.057,-108.424,-28.670)
C2: (42.442,-104.643,-32.573)
N1: (41.430,-105.015,-33.358)
N3: (43.154,-105.312,-31.679)
N6: (39.987,-106.679,-34.059)
N7: (41.533,-108.433,-32.002)
N9: (43.208,-107.533,-30.836)
O5': (46.155,-110.599,-30.118)
O3': (45.711,-107.506,-27.149)
Image (generated by PyMOL):