Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11807:11808
Extra
PDB:
ATOM 1 O3' U A1806 5.912 56.996 99.683 1.00 56.95 O
ATOM 2 P G A1807 4.559 56.721 100.476 1.00 60.51 P
ATOM 3 OP1 G A1807 3.472 57.224 99.629 1.00 60.74 O
ATOM 4 OP2 G A1807 4.717 57.252 101.831 1.00 61.01 O
ATOM 5 O5' G A1807 4.487 55.162 100.542 1.00 59.86 O
ATOM 6 C5' G A1807 3.863 54.438 99.517 1.00 59.45 C
ATOM 7 C4' G A1807 4.299 53.029 99.570 1.00 58.79 C
ATOM 8 O4' G A1807 5.718 52.983 99.863 1.00 58.60 O
ATOM 9 C3' G A1807 3.692 52.222 100.676 1.00 58.80 C
ATOM 10 O3' G A1807 2.346 51.846 100.404 1.00 58.83 O
ATOM 11 C2' G A1807 4.698 51.063 100.801 1.00 58.19 C
ATOM 12 O2' G A1807 4.526 50.080 99.774 1.00 57.61 O
ATOM 13 C1' G A1807 6.025 51.801 100.559 1.00 58.21 C
ATOM 14 N9 G A1807 6.633 52.145 101.837 1.00 58.54 N
ATOM 15 C8 G A1807 6.297 53.183 102.646 1.00 59.20 C
ATOM 16 N7 G A1807 6.898 53.152 103.794 1.00 59.36 N
ATOM 17 C5 G A1807 7.626 51.996 103.725 1.00 58.76 C
ATOM 18 C6 G A1807 8.465 51.443 104.686 1.00 58.64 C
ATOM 19 O6 G A1807 8.707 51.899 105.802 1.00 59.06 O
ATOM 20 N1 G A1807 9.035 50.271 104.237 1.00 57.97 N
ATOM 21 C2 G A1807 8.793 49.727 103.028 1.00 57.51 C
ATOM 22 N2 G A1807 9.421 48.593 102.822 1.00 56.93 N
ATOM 23 N3 G A1807 8.004 50.220 102.121 1.00 57.61 N
ATOM 24 C4 G A1807 7.460 51.349 102.545 1.00 58.24 C
ATOM 25 P A A1808 1.235 51.928 101.552 1.00 58.92 P
ATOM 26 OP1 A A1808 -0.078 52.072 100.900 1.00 59.08 O
ATOM 27 OP2 A A1808 1.659 52.958 102.510 1.00 59.48 O
ATOM 28 O5' A A1808 1.347 50.506 102.218 1.00 58.47 O
TER
ATOM 1 O3' G B1807 2.346 51.846 100.404 1.00 58.83 O
ATOM 2 P A B1808 1.235 51.928 101.552 1.00 58.92 P
ATOM 3 OP1 A B1808 -0.078 52.072 100.900 1.00 59.08 O
ATOM 4 OP2 A B1808 1.659 52.958 102.510 1.00 59.48 O
ATOM 5 O5' A B1808 1.347 50.506 102.218 1.00 58.47 O
ATOM 6 C5' A B1808 1.005 50.313 103.577 1.00 58.77 C
ATOM 7 C4' A B1808 1.325 48.912 104.024 1.00 58.26 C
ATOM 8 O4' A B1808 0.830 47.969 103.057 1.00 57.76 O
ATOM 9 C3' A B1808 2.795 48.572 104.159 1.00 57.90 C
ATOM 10 O3' A B1808 3.283 48.957 105.409 1.00 58.26 O
ATOM 11 C2' A B1808 2.802 47.071 103.993 1.00 57.29 C
ATOM 12 O2' A B1808 2.400 46.454 105.209 1.00 57.41 O
ATOM 13 C1' A B1808 1.687 46.862 102.982 1.00 57.17 C
ATOM 14 N9 A B1808 2.170 46.746 101.602 1.00 56.73 N
ATOM 15 C8 A B1808 2.215 47.735 100.683 1.00 56.90 C
ATOM 16 N7 A B1808 2.622 47.301 99.520 1.00 56.42 N
ATOM 17 C5 A B1808 2.829 45.951 99.679 1.00 55.92 C
ATOM 18 C6 A B1808 3.287 44.946 98.818 1.00 55.29 C
ATOM 19 N6 A B1808 3.608 45.139 97.554 1.00 55.06 N
ATOM 20 N1 A B1808 3.425 43.699 99.293 1.00 54.92 N
ATOM 21 C2 A B1808 3.081 43.503 100.574 1.00 55.17 C
ATOM 22 N3 A B1808 2.636 44.379 101.486 1.00 55.76 N
ATOM 23 C4 A B1808 2.545 45.602 100.964 1.00 56.11 C
ATOM 24 P A B1809 4.486 49.982 105.559 1.00 58.80 P
ATOM 25 OP1 A B1809 4.256 50.714 106.826 1.00 59.44 O
ATOM 26 OP2 A B1809 4.586 50.750 104.310 1.00 58.78 O
ATOM 27 O5' A B1809 5.719 48.994 105.703 1.00 58.25 O
TER
ATOM 2 P G A1807 4.559 56.721 100.476 1.00 60.51 P
ATOM 3 OP1 G A1807 3.472 57.224 99.629 1.00 60.74 O
ATOM 4 OP2 G A1807 4.717 57.252 101.831 1.00 61.01 O
ATOM 5 O5' G A1807 4.487 55.162 100.542 1.00 59.86 O
ATOM 6 C5' G A1807 3.863 54.438 99.517 1.00 59.45 C
ATOM 7 C4' G A1807 4.299 53.029 99.570 1.00 58.79 C
ATOM 8 O4' G A1807 5.718 52.983 99.863 1.00 58.60 O
ATOM 9 C3' G A1807 3.692 52.222 100.676 1.00 58.80 C
ATOM 10 O3' G A1807 2.346 51.846 100.404 1.00 58.83 O
ATOM 11 C2' G A1807 4.698 51.063 100.801 1.00 58.19 C
ATOM 12 O2' G A1807 4.526 50.080 99.774 1.00 57.61 O
ATOM 13 C1' G A1807 6.025 51.801 100.559 1.00 58.21 C
ATOM 14 N9 G A1807 6.633 52.145 101.837 1.00 58.54 N
ATOM 15 C8 G A1807 6.297 53.183 102.646 1.00 59.20 C
ATOM 16 N7 G A1807 6.898 53.152 103.794 1.00 59.36 N
ATOM 17 C5 G A1807 7.626 51.996 103.725 1.00 58.76 C
ATOM 18 C6 G A1807 8.465 51.443 104.686 1.00 58.64 C
ATOM 19 O6 G A1807 8.707 51.899 105.802 1.00 59.06 O
ATOM 20 N1 G A1807 9.035 50.271 104.237 1.00 57.97 N
ATOM 21 C2 G A1807 8.793 49.727 103.028 1.00 57.51 C
ATOM 22 N2 G A1807 9.421 48.593 102.822 1.00 56.93 N
ATOM 23 N3 G A1807 8.004 50.220 102.121 1.00 57.61 N
ATOM 24 C4 G A1807 7.460 51.349 102.545 1.00 58.24 C
ATOM 25 P A A1808 1.235 51.928 101.552 1.00 58.92 P
ATOM 26 OP1 A A1808 -0.078 52.072 100.900 1.00 59.08 O
ATOM 27 OP2 A A1808 1.659 52.958 102.510 1.00 59.48 O
ATOM 28 O5' A A1808 1.347 50.506 102.218 1.00 58.47 O
TER
ATOM 1 O3' G B1807 2.346 51.846 100.404 1.00 58.83 O
ATOM 2 P A B1808 1.235 51.928 101.552 1.00 58.92 P
ATOM 3 OP1 A B1808 -0.078 52.072 100.900 1.00 59.08 O
ATOM 4 OP2 A B1808 1.659 52.958 102.510 1.00 59.48 O
ATOM 5 O5' A B1808 1.347 50.506 102.218 1.00 58.47 O
ATOM 6 C5' A B1808 1.005 50.313 103.577 1.00 58.77 C
ATOM 7 C4' A B1808 1.325 48.912 104.024 1.00 58.26 C
ATOM 8 O4' A B1808 0.830 47.969 103.057 1.00 57.76 O
ATOM 9 C3' A B1808 2.795 48.572 104.159 1.00 57.90 C
ATOM 10 O3' A B1808 3.283 48.957 105.409 1.00 58.26 O
ATOM 11 C2' A B1808 2.802 47.071 103.993 1.00 57.29 C
ATOM 12 O2' A B1808 2.400 46.454 105.209 1.00 57.41 O
ATOM 13 C1' A B1808 1.687 46.862 102.982 1.00 57.17 C
ATOM 14 N9 A B1808 2.170 46.746 101.602 1.00 56.73 N
ATOM 15 C8 A B1808 2.215 47.735 100.683 1.00 56.90 C
ATOM 16 N7 A B1808 2.622 47.301 99.520 1.00 56.42 N
ATOM 17 C5 A B1808 2.829 45.951 99.679 1.00 55.92 C
ATOM 18 C6 A B1808 3.287 44.946 98.818 1.00 55.29 C
ATOM 19 N6 A B1808 3.608 45.139 97.554 1.00 55.06 N
ATOM 20 N1 A B1808 3.425 43.699 99.293 1.00 54.92 N
ATOM 21 C2 A B1808 3.081 43.503 100.574 1.00 55.17 C
ATOM 22 N3 A B1808 2.636 44.379 101.486 1.00 55.76 N
ATOM 23 C4 A B1808 2.545 45.602 100.964 1.00 56.11 C
ATOM 24 P A B1809 4.486 49.982 105.559 1.00 58.80 P
ATOM 25 OP1 A B1809 4.256 50.714 106.826 1.00 59.44 O
ATOM 26 OP2 A B1809 4.586 50.750 104.310 1.00 58.78 O
ATOM 27 O5' A B1809 5.719 48.994 105.703 1.00 58.25 O
TER
Atoms:
OP1: (3.472,57.224,99.629)
OP2: (4.717,57.252,101.831)
C3': (3.692,52.222,100.676)
C1': (6.025,51.801,100.559)
C5': (3.863,54.438,99.517)
O6: (8.707,51.899,105.802)
O4': (5.718,52.983,99.863)
C8: (6.297,53.183,102.646)
C2: (8.793,49.727,103.028)
C6: (8.465,51.443,104.686)
C5: (7.626,51.996,103.725)
C4: (7.460,51.349,102.545)
P: (4.559,56.721,100.476)
C4': (4.299,53.029,99.570)
C2': (4.698,51.063,100.801)
O2': (4.526,50.080,99.774)
N1: (9.035,50.271,104.237)
N2: (9.421,48.593,102.822)
N3: (8.004,50.220,102.121)
N7: (6.898,53.152,103.794)
N9: (6.633,52.145,101.837)
O5': (4.487,55.162,100.542)
O3': (2.346,51.846,100.404)
OP2: (4.717,57.252,101.831)
C3': (3.692,52.222,100.676)
C1': (6.025,51.801,100.559)
C5': (3.863,54.438,99.517)
O6: (8.707,51.899,105.802)
O4': (5.718,52.983,99.863)
C8: (6.297,53.183,102.646)
C2: (8.793,49.727,103.028)
C6: (8.465,51.443,104.686)
C5: (7.626,51.996,103.725)
C4: (7.460,51.349,102.545)
P: (4.559,56.721,100.476)
C4': (4.299,53.029,99.570)
C2': (4.698,51.063,100.801)
O2': (4.526,50.080,99.774)
N1: (9.035,50.271,104.237)
N2: (9.421,48.593,102.822)
N3: (8.004,50.220,102.121)
N7: (6.898,53.152,103.794)
N9: (6.633,52.145,101.837)
O5': (4.487,55.162,100.542)
O3': (2.346,51.846,100.404)
OP1: (-0.078,52.072,100.900)
OP2: (1.659,52.958,102.510)
C3': (2.795,48.572,104.159)
C1': (1.687,46.862,102.982)
C5': (1.005,50.313,103.577)
O4': (0.830,47.969,103.057)
C8: (2.215,47.735,100.683)
O2': (2.400,46.454,105.209)
C6: (3.287,44.946,98.818)
C5: (2.829,45.951,99.679)
C4: (2.545,45.602,100.964)
P: (1.235,51.928,101.552)
C4': (1.325,48.912,104.024)
C2': (2.802,47.071,103.993)
C2: (3.081,43.503,100.574)
N1: (3.425,43.699,99.293)
N3: (2.636,44.379,101.486)
N6: (3.608,45.139,97.554)
N7: (2.622,47.301,99.520)
N9: (2.170,46.746,101.602)
O5': (1.347,50.506,102.218)
O3': (3.283,48.957,105.409)
OP2: (1.659,52.958,102.510)
C3': (2.795,48.572,104.159)
C1': (1.687,46.862,102.982)
C5': (1.005,50.313,103.577)
O4': (0.830,47.969,103.057)
C8: (2.215,47.735,100.683)
O2': (2.400,46.454,105.209)
C6: (3.287,44.946,98.818)
C5: (2.829,45.951,99.679)
C4: (2.545,45.602,100.964)
P: (1.235,51.928,101.552)
C4': (1.325,48.912,104.024)
C2': (2.802,47.071,103.993)
C2: (3.081,43.503,100.574)
N1: (3.425,43.699,99.293)
N3: (2.636,44.379,101.486)
N6: (3.608,45.139,97.554)
N7: (2.622,47.301,99.520)
N9: (2.170,46.746,101.602)
O5': (1.347,50.506,102.218)
O3': (3.283,48.957,105.409)
Image (generated by PyMOL):