ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A314:A315

Extra

PDB:
ATOM 1 O3' U A 313 114.248 47.317 -7.774 1.00 29.36 O
ATOM 2 P G A 314 113.023 48.002 -8.547 1.00 32.46 P
ATOM 3 OP1 G A 314 111.792 47.256 -8.139 1.00 34.56 O
ATOM 4 OP2 G A 314 113.367 48.111 -9.982 1.00 34.77 O
ATOM 5 O5' G A 314 112.939 49.459 -7.950 1.00 31.88 O
ATOM 6 C5' G A 314 112.442 49.678 -6.633 1.00 31.76 C
ATOM 7 C4' G A 314 113.029 50.942 -6.056 1.00 31.44 C
ATOM 8 O4' G A 314 114.447 50.959 -6.329 1.00 30.66 O
ATOM 9 C3' G A 314 112.520 52.272 -6.594 1.00 31.69 C
ATOM 10 O3' G A 314 111.363 52.671 -5.882 1.00 32.46 O
ATOM 11 C2' G A 314 113.678 53.200 -6.262 1.00 31.57 C
ATOM 12 O2' G A 314 113.660 53.582 -4.896 1.00 31.97 O
ATOM 13 C1' G A 314 114.880 52.289 -6.510 1.00 31.07 C
ATOM 14 N9 G A 314 115.340 52.427 -7.884 1.00 30.97 N
ATOM 15 C8 G A 314 114.898 51.727 -8.981 1.00 31.20 C
ATOM 16 N7 G A 314 115.423 52.143 -10.098 1.00 31.34 N
ATOM 17 C5 G A 314 116.276 53.168 -9.712 1.00 32.07 C
ATOM 18 C6 G A 314 117.087 54.025 -10.491 1.00 32.30 C
ATOM 19 O6 G A 314 117.224 54.045 -11.723 1.00 35.70 O
ATOM 20 N1 G A 314 117.778 54.936 -9.695 1.00 30.22 N
ATOM 21 C2 G A 314 117.696 55.010 -8.329 1.00 28.74 C
ATOM 22 N2 G A 314 118.415 55.965 -7.746 1.00 27.93 N
ATOM 23 N3 G A 314 116.952 54.212 -7.591 1.00 30.16 N
ATOM 24 C4 G A 314 116.262 53.329 -8.345 1.00 31.59 C
ATOM 25 P A A 315 110.087 53.249 -6.666 1.00 32.54 P
ATOM 26 OP1 A A 315 109.885 52.470 -7.918 1.00 31.91 O
ATOM 27 OP2 A A 315 108.994 53.349 -5.647 1.00 31.88 O
ATOM 28 O5' A A 315 110.530 54.713 -7.096 1.00 33.00 O
TER

ATOM 1 O3' G B 314 111.363 52.671 -5.882 1.00 32.46 O
ATOM 2 P A B 315 110.087 53.249 -6.666 1.00 32.54 P
ATOM 3 OP1 A B 315 109.885 52.470 -7.918 1.00 31.91 O
ATOM 4 OP2 A B 315 108.994 53.349 -5.647 1.00 31.88 O
ATOM 5 O5' A B 315 110.530 54.713 -7.096 1.00 33.00 O
ATOM 6 C5' A B 315 109.741 55.481 -8.025 1.00 30.16 C
ATOM 7 C4' A B 315 110.208 56.915 -8.051 1.00 29.18 C
ATOM 8 O4' A B 315 109.883 57.568 -6.799 1.00 28.68 O
ATOM 9 C3' A B 315 111.700 57.140 -8.210 1.00 29.91 C
ATOM 10 O3' A B 315 112.099 57.083 -9.558 1.00 30.88 O
ATOM 11 C2' A B 315 111.888 58.535 -7.636 1.00 30.04 C
ATOM 12 O2' A B 315 111.539 59.532 -8.576 1.00 32.36 O
ATOM 13 C1' A B 315 110.858 58.549 -6.509 1.00 28.43 C
ATOM 14 N9 A B 315 111.421 58.266 -5.193 1.00 27.05 N
ATOM 15 C8 A B 315 111.297 57.122 -4.455 1.00 27.09 C
ATOM 16 N7 A B 315 111.842 57.201 -3.265 1.00 28.38 N
ATOM 17 C5 A B 315 112.379 58.476 -3.228 1.00 26.39 C
ATOM 18 C6 A B 315 113.063 59.182 -2.225 1.00 27.69 C
ATOM 19 N6 A B 315 113.337 58.678 -1.023 1.00 27.90 N
ATOM 20 N1 A B 315 113.457 60.442 -2.500 1.00 28.40 N
ATOM 21 C2 A B 315 113.180 60.941 -3.713 1.00 29.94 C
ATOM 22 N3 A B 315 112.540 60.372 -4.739 1.00 26.90 N
ATOM 23 C4 A B 315 112.155 59.131 -4.421 1.00 25.99 C
ATOM 24 P G B 316 113.459 56.325 -9.944 1.00 30.67 P
ATOM 25 OP1 G B 316 113.533 56.354 -11.429 1.00 32.24 O
ATOM 26 OP2 G B 316 113.443 55.016 -9.237 1.00 32.14 O
ATOM 27 O5' G B 316 114.618 57.259 -9.336 1.00 31.20 O
TER

Atoms:
OP1: (111.792,47.256,-8.139)
OP2: (113.367,48.111,-9.982)
C3': (112.520,52.272,-6.594)
C1': (114.880,52.289,-6.510)
C5': (112.442,49.678,-6.633)
O6: (117.224,54.045,-11.723)
O4': (114.447,50.959,-6.329)
C8: (114.898,51.727,-8.981)
C2: (117.696,55.010,-8.329)
C6: (117.087,54.025,-10.491)
C5: (116.276,53.168,-9.712)
C4: (116.262,53.329,-8.345)
P: (113.023,48.002,-8.547)
C4': (113.029,50.942,-6.056)
C2': (113.678,53.200,-6.262)
O2': (113.660,53.582,-4.896)
N1: (117.778,54.936,-9.695)
N2: (118.415,55.965,-7.746)
N3: (116.952,54.212,-7.591)
N7: (115.423,52.143,-10.098)
N9: (115.340,52.427,-7.884)
O5': (112.939,49.459,-7.950)
O3': (111.363,52.671,-5.882)
OP1: (109.885,52.470,-7.918)
OP2: (108.994,53.349,-5.647)
C3': (111.700,57.140,-8.210)
C1': (110.858,58.549,-6.509)
C5': (109.741,55.481,-8.025)
O4': (109.883,57.568,-6.799)
C8: (111.297,57.122,-4.455)
O2': (111.539,59.532,-8.576)
C6: (113.063,59.182,-2.225)
C5: (112.379,58.476,-3.228)
C4: (112.155,59.131,-4.421)
P: (110.087,53.249,-6.666)
C4': (110.208,56.915,-8.051)
C2': (111.888,58.535,-7.636)
C2: (113.180,60.941,-3.713)
N1: (113.457,60.442,-2.500)
N3: (112.540,60.372,-4.739)
N6: (113.337,58.678,-1.023)
N7: (111.842,57.201,-3.265)
N9: (111.421,58.266,-5.193)
O5': (110.530,54.713,-7.096)
O3': (112.099,57.083,-9.558)
Image (generated by PyMOL):
PyMOL image
show in jmol