ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K9M:A679:A680

Extra

PDB:
ATOM 1 O3' G A 678 57.714 68.652 50.155 1.00 46.48 O
ATOM 2 P G A 679 58.807 69.749 50.615 1.00 46.37 P
ATOM 3 OP1 G A 679 59.216 69.438 52.006 1.00 45.39 O
ATOM 4 OP2 G A 679 58.271 71.098 50.289 1.00 46.53 O
ATOM 5 O5' G A 679 60.066 69.468 49.685 1.00 47.35 O
ATOM 6 C5' G A 679 60.788 68.227 49.805 1.00 50.32 C
ATOM 7 C4' G A 679 61.888 68.154 48.776 1.00 50.97 C
ATOM 8 O4' G A 679 61.329 68.034 47.438 1.00 51.29 O
ATOM 9 C3' G A 679 62.752 69.394 48.679 1.00 52.20 C
ATOM 10 O3' G A 679 63.720 69.481 49.707 1.00 52.30 O
ATOM 11 C2' G A 679 63.377 69.241 47.299 1.00 52.51 C
ATOM 12 O2' G A 679 64.477 68.349 47.277 1.00 53.99 O
ATOM 13 C1' G A 679 62.193 68.675 46.506 1.00 53.00 C
ATOM 14 N9 G A 679 61.449 69.739 45.831 1.00 54.27 N
ATOM 15 C8 G A 679 60.335 70.409 46.282 1.00 54.60 C
ATOM 16 N7 G A 679 59.918 71.329 45.451 1.00 55.14 N
ATOM 17 C5 G A 679 60.800 71.260 44.386 1.00 55.89 C
ATOM 18 C6 G A 679 60.847 72.017 43.175 1.00 57.20 C
ATOM 19 O6 G A 679 60.084 72.932 42.795 1.00 56.51 O
ATOM 20 N1 G A 679 61.912 71.615 42.367 1.00 57.27 N
ATOM 21 C2 G A 679 62.806 70.615 42.681 1.00 57.02 C
ATOM 22 N2 G A 679 63.750 70.362 41.784 1.00 57.79 N
ATOM 23 N3 G A 679 62.772 69.910 43.801 1.00 55.76 N
ATOM 24 C4 G A 679 61.751 70.282 44.601 1.00 55.28 C
ATOM 25 P A A 680 64.080 70.921 50.321 1.00 53.57 P
ATOM 26 OP1 A A 680 65.135 70.754 51.356 1.00 52.80 O
ATOM 27 OP2 A A 680 62.770 71.532 50.681 1.00 54.31 O
ATOM 28 O5' A A 680 64.704 71.730 49.092 1.00 54.08 O
TER

ATOM 1 O3' G B 679 63.720 69.481 49.707 1.00 52.30 O
ATOM 2 P A B 680 64.080 70.921 50.321 1.00 53.57 P
ATOM 3 OP1 A B 680 65.135 70.754 51.356 1.00 52.80 O
ATOM 4 OP2 A B 680 62.770 71.532 50.681 1.00 54.31 O
ATOM 5 O5' A B 680 64.704 71.730 49.092 1.00 54.08 O
ATOM 6 C5' A B 680 64.847 73.159 49.137 1.00 52.72 C
ATOM 7 C4' A B 680 66.107 73.592 48.417 1.00 53.59 C
ATOM 8 O4' A B 680 67.241 72.914 49.008 1.00 54.10 O
ATOM 9 C3' A B 680 66.198 73.267 46.933 1.00 53.82 C
ATOM 10 O3' A B 680 65.573 74.287 46.144 1.00 55.62 O
ATOM 11 C2' A B 680 67.701 73.263 46.703 1.00 53.84 C
ATOM 12 O2' A B 680 68.228 74.567 46.618 1.00 53.89 O
ATOM 13 C1' A B 680 68.202 72.626 48.002 1.00 54.32 C
ATOM 14 N9 A B 680 68.362 71.170 47.920 1.00 55.35 N
ATOM 15 C8 A B 680 67.524 70.193 48.404 1.00 55.26 C
ATOM 16 N7 A B 680 67.920 68.979 48.141 1.00 55.26 N
ATOM 17 C5 A B 680 69.106 69.161 47.447 1.00 56.05 C
ATOM 18 C6 A B 680 70.021 68.255 46.879 1.00 56.84 C
ATOM 19 N6 A B 680 69.886 66.927 46.936 1.00 56.13 N
ATOM 20 N1 A B 680 71.101 68.769 46.245 1.00 57.87 N
ATOM 21 C2 A B 680 71.241 70.107 46.196 1.00 57.39 C
ATOM 22 N3 A B 680 70.448 71.054 46.692 1.00 56.59 N
ATOM 23 C4 A B 680 69.392 70.506 47.311 1.00 55.78 C
ATOM 24 P A B 681 64.572 73.874 44.965 1.00 55.86 P
ATOM 25 OP1 A B 681 64.000 75.115 44.346 1.00 52.73 O
ATOM 26 OP2 A B 681 63.665 72.894 45.618 1.00 55.67 O
ATOM 27 O5' A B 681 65.508 73.117 43.903 1.00 56.81 O
TER

Atoms:
OP1: (59.216,69.438,52.006)
OP2: (58.271,71.098,50.289)
C3': (62.752,69.394,48.679)
C1': (62.193,68.675,46.506)
C5': (60.788,68.227,49.805)
O6: (60.084,72.932,42.795)
O4': (61.329,68.034,47.438)
C8: (60.335,70.409,46.282)
C2: (62.806,70.615,42.681)
C6: (60.847,72.017,43.175)
C5: (60.800,71.260,44.386)
C4: (61.751,70.282,44.601)
P: (58.807,69.749,50.615)
C4': (61.888,68.154,48.776)
C2': (63.377,69.241,47.299)
O2': (64.477,68.349,47.277)
N1: (61.912,71.615,42.367)
N2: (63.750,70.362,41.784)
N3: (62.772,69.910,43.801)
N7: (59.918,71.329,45.451)
N9: (61.449,69.739,45.831)
O5': (60.066,69.468,49.685)
O3': (63.720,69.481,49.707)
OP1: (65.135,70.754,51.356)
OP2: (62.770,71.532,50.681)
C3': (66.198,73.267,46.933)
C1': (68.202,72.626,48.002)
C5': (64.847,73.159,49.137)
O4': (67.241,72.914,49.008)
C8: (67.524,70.193,48.404)
O2': (68.228,74.567,46.618)
C6: (70.021,68.255,46.879)
C5: (69.106,69.161,47.447)
C4: (69.392,70.506,47.311)
P: (64.080,70.921,50.321)
C4': (66.107,73.592,48.417)
C2': (67.701,73.263,46.703)
C2: (71.241,70.107,46.196)
N1: (71.101,68.769,46.245)
N3: (70.448,71.054,46.692)
N6: (69.886,66.927,46.936)
N7: (67.920,68.979,48.141)
N9: (68.362,71.170,47.920)
O5': (64.704,71.730,49.092)
O3': (65.573,74.287,46.144)
Image (generated by PyMOL):
PyMOL image
show in jmol