ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:0679:0680

Extra

PDB:
ATOM 1 O3' G A 678 57.205 68.154 49.503 1.00 44.17 O
ATOM 2 P G A 679 58.357 69.198 49.908 1.00 41.69 P
ATOM 3 OP1 G A 679 58.753 68.888 51.307 1.00 44.03 O
ATOM 4 OP2 G A 679 57.888 70.569 49.566 1.00 44.02 O
ATOM 5 O5' G A 679 59.568 68.816 48.951 1.00 39.88 O
ATOM 6 C5' G A 679 60.298 67.594 49.139 1.00 39.94 C
ATOM 7 C4' G A 679 61.405 67.483 48.119 1.00 41.98 C
ATOM 8 O4' G A 679 60.844 67.269 46.795 1.00 40.31 O
ATOM 9 C3' G A 679 62.268 68.723 47.942 1.00 42.17 C
ATOM 10 O3' G A 679 63.241 68.861 48.963 1.00 44.08 O
ATOM 11 C2' G A 679 62.869 68.493 46.559 1.00 40.28 C
ATOM 12 O2' G A 679 63.945 67.578 46.524 1.00 38.54 O
ATOM 13 C1' G A 679 61.669 67.899 45.823 1.00 40.21 C
ATOM 14 N9 G A 679 60.914 68.976 45.195 1.00 40.91 N
ATOM 15 C8 G A 679 59.874 69.701 45.731 1.00 39.56 C
ATOM 16 N7 G A 679 59.463 70.658 44.945 1.00 39.03 N
ATOM 17 C5 G A 679 60.272 70.547 43.821 1.00 41.02 C
ATOM 18 C6 G A 679 60.322 71.332 42.637 1.00 41.59 C
ATOM 19 O6 G A 679 59.637 72.321 42.335 1.00 44.20 O
ATOM 20 N1 G A 679 61.296 70.865 41.760 1.00 41.97 N
ATOM 21 C2 G A 679 62.114 69.787 41.988 1.00 40.79 C
ATOM 22 N2 G A 679 62.978 69.468 41.015 1.00 41.60 N
ATOM 23 N3 G A 679 62.087 69.067 43.087 1.00 41.10 N
ATOM 24 C4 G A 679 61.151 69.499 43.954 1.00 39.40 C
ATOM 25 P A A 680 63.598 70.326 49.524 1.00 44.76 P
ATOM 26 OP1 A A 680 64.718 70.160 50.482 1.00 43.67 O
ATOM 27 OP2 A A 680 62.343 70.973 49.966 1.00 41.80 O
ATOM 28 O5' A A 680 64.141 71.115 48.249 1.00 44.86 O
TER

ATOM 1 O3' G B 679 63.241 68.861 48.963 1.00 44.08 O
ATOM 2 P A B 680 63.598 70.326 49.524 1.00 44.76 P
ATOM 3 OP1 A B 680 64.718 70.160 50.482 1.00 43.67 O
ATOM 4 OP2 A B 680 62.343 70.973 49.966 1.00 41.80 O
ATOM 5 O5' A B 680 64.141 71.115 48.249 1.00 44.86 O
ATOM 6 C5' A B 680 64.292 72.549 48.282 1.00 42.06 C
ATOM 7 C4' A B 680 65.555 72.966 47.564 1.00 41.81 C
ATOM 8 O4' A B 680 66.702 72.305 48.166 1.00 41.14 O
ATOM 9 C3' A B 680 65.653 72.601 46.095 1.00 41.32 C
ATOM 10 O3' A B 680 64.948 73.535 45.285 1.00 42.47 O
ATOM 11 C2' A B 680 67.157 72.650 45.868 1.00 42.67 C
ATOM 12 O2' A B 680 67.645 73.970 45.779 1.00 44.30 O
ATOM 13 C1' A B 680 67.673 72.032 47.170 1.00 42.90 C
ATOM 14 N9 A B 680 67.821 70.580 47.067 1.00 45.57 N
ATOM 15 C8 A B 680 66.926 69.613 47.468 1.00 45.00 C
ATOM 16 N7 A B 680 67.328 68.391 47.229 1.00 44.42 N
ATOM 17 C5 A B 680 68.570 68.558 46.634 1.00 45.58 C
ATOM 18 C6 A B 680 69.514 67.639 46.147 1.00 46.24 C
ATOM 19 N6 A B 680 69.342 66.318 46.184 1.00 46.93 N
ATOM 20 N1 A B 680 70.657 68.131 45.615 1.00 46.34 N
ATOM 21 C2 A B 680 70.825 69.460 45.581 1.00 45.50 C
ATOM 22 N3 A B 680 70.011 70.425 46.007 1.00 44.66 N
ATOM 23 C4 A B 680 68.888 69.901 46.530 1.00 45.28 C
ATOM 24 P A B 681 63.928 73.007 44.154 1.00 45.60 P
ATOM 25 OP1 A B 681 63.272 74.183 43.523 1.00 45.34 O
ATOM 26 OP2 A B 681 63.081 71.957 44.779 1.00 47.88 O
ATOM 27 O5' A B 681 64.879 72.320 43.072 1.00 46.58 O
TER

Atoms:
OP1: (58.753,68.888,51.307)
OP2: (57.888,70.569,49.566)
C3': (62.268,68.723,47.942)
C1': (61.669,67.899,45.823)
C5': (60.298,67.594,49.139)
O6: (59.637,72.321,42.335)
O4': (60.844,67.269,46.795)
C8: (59.874,69.701,45.731)
C2: (62.114,69.787,41.988)
C6: (60.322,71.332,42.637)
C5: (60.272,70.547,43.821)
C4: (61.151,69.499,43.954)
P: (58.357,69.198,49.908)
C4': (61.405,67.483,48.119)
C2': (62.869,68.493,46.559)
O2': (63.945,67.578,46.524)
N1: (61.296,70.865,41.760)
N2: (62.978,69.468,41.015)
N3: (62.087,69.067,43.087)
N7: (59.463,70.658,44.945)
N9: (60.914,68.976,45.195)
O5': (59.568,68.816,48.951)
O3': (63.241,68.861,48.963)
OP1: (64.718,70.160,50.482)
OP2: (62.343,70.973,49.966)
C3': (65.653,72.601,46.095)
C1': (67.673,72.032,47.170)
C5': (64.292,72.549,48.282)
O4': (66.702,72.305,48.166)
C8: (66.926,69.613,47.468)
O2': (67.645,73.970,45.779)
C6: (69.514,67.639,46.147)
C5: (68.570,68.558,46.634)
C4: (68.888,69.901,46.530)
P: (63.598,70.326,49.524)
C4': (65.555,72.966,47.564)
C2': (67.157,72.650,45.868)
C2: (70.825,69.460,45.581)
N1: (70.657,68.131,45.615)
N3: (70.011,70.425,46.007)
N6: (69.342,66.318,46.184)
N7: (67.328,68.391,47.229)
N9: (67.821,70.580,47.067)
O5': (64.141,71.115,48.249)
O3': (64.948,73.535,45.285)
Image (generated by PyMOL):
PyMOL image
show in jmol