ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MUM:R24:R25

Extra

PDB:
ATOM 1 O3' C A 23 5.654 -10.622 -17.489 1.00 37.02 O
ATOM 2 P G A 24 6.157 -10.095 -18.916 1.00 36.98 P
ATOM 3 OP1 G A 24 6.231 -11.269 -19.815 1.00 37.51 O
ATOM 4 OP2 G A 24 7.352 -9.239 -18.708 1.00 35.31 O
ATOM 5 O5' G A 24 4.972 -9.145 -19.397 1.00 34.96 O
ATOM 6 C5' G A 24 3.627 -9.554 -19.229 1.00 35.25 C
ATOM 7 C4' G A 24 2.733 -8.347 -19.043 1.00 36.05 C
ATOM 8 O4' G A 24 3.003 -7.731 -17.762 1.00 34.06 O
ATOM 9 C3' G A 24 2.977 -7.185 -19.991 1.00 38.10 C
ATOM 10 O3' G A 24 2.502 -7.437 -21.310 1.00 42.05 O
ATOM 11 C2' G A 24 2.182 -6.110 -19.261 1.00 35.17 C
ATOM 12 O2' G A 24 0.779 -6.279 -19.369 1.00 35.57 O
ATOM 13 C1' G A 24 2.656 -6.359 -17.829 1.00 32.26 C
ATOM 14 N9 G A 24 3.809 -5.518 -17.507 1.00 30.92 N
ATOM 15 C8 G A 24 5.142 -5.865 -17.512 1.00 30.49 C
ATOM 16 N7 G A 24 5.939 -4.879 -17.200 1.00 28.92 N
ATOM 17 C5 G A 24 5.082 -3.806 -16.976 1.00 29.27 C
ATOM 18 C6 G A 24 5.362 -2.464 -16.611 1.00 29.77 C
ATOM 19 O6 G A 24 6.469 -1.941 -16.401 1.00 32.21 O
ATOM 20 N1 G A 24 4.201 -1.698 -16.491 1.00 27.51 N
ATOM 21 C2 G A 24 2.927 -2.172 -16.699 1.00 29.33 C
ATOM 22 N2 G A 24 1.922 -1.298 -16.536 1.00 32.21 N
ATOM 23 N3 G A 24 2.653 -3.421 -17.047 1.00 29.68 N
ATOM 24 C4 G A 24 3.771 -4.183 -17.165 1.00 29.93 C
ATOM 25 P A A 25 3.379 -6.988 -22.577 1.00 45.10 P
ATOM 26 OP1 A A 25 2.448 -6.911 -23.724 1.00 45.91 O
ATOM 27 OP2 A A 25 4.573 -7.858 -22.636 1.00 44.57 O
ATOM 28 O5' A A 25 3.893 -5.511 -22.237 1.00 45.48 O
TER

ATOM 1 O3' G B 24 2.502 -7.437 -21.310 1.00 42.05 O
ATOM 2 P A B 25 3.379 -6.988 -22.577 1.00 45.10 P
ATOM 3 OP1 A B 25 2.448 -6.911 -23.724 1.00 45.91 O
ATOM 4 OP2 A B 25 4.573 -7.858 -22.636 1.00 44.57 O
ATOM 5 O5' A B 25 3.893 -5.511 -22.237 1.00 45.48 O
ATOM 6 C5' A B 25 4.459 -4.688 -23.266 1.00 42.92 C
ATOM 7 C4' A B 25 3.508 -3.575 -23.681 1.00 39.42 C
ATOM 8 O4' A B 25 2.311 -4.148 -24.247 1.00 39.26 O
ATOM 9 C3' A B 25 2.955 -2.737 -22.548 1.00 38.62 C
ATOM 10 O3' A B 25 3.889 -1.755 -22.145 1.00 39.84 O
ATOM 11 C2' A B 25 1.704 -2.130 -23.165 1.00 37.46 C
ATOM 12 O2' A B 25 1.983 -0.990 -23.949 1.00 37.91 O
ATOM 13 C1' A B 25 1.211 -3.276 -24.043 1.00 37.31 C
ATOM 14 N9 A B 25 0.072 -4.046 -23.514 1.00 36.74 N
ATOM 15 C8 A B 25 -0.007 -5.406 -23.340 1.00 37.12 C
ATOM 16 N7 A B 25 -1.157 -5.828 -22.862 1.00 36.67 N
ATOM 17 C5 A B 25 -1.891 -4.665 -22.711 1.00 35.00 C
ATOM 18 C6 A B 25 -3.200 -4.420 -22.244 1.00 36.74 C
ATOM 19 N6 A B 25 -4.033 -5.375 -21.826 1.00 37.72 N
ATOM 20 N1 A B 25 -3.634 -3.143 -22.223 1.00 39.50 N
ATOM 21 C2 A B 25 -2.804 -2.172 -22.640 1.00 40.46 C
ATOM 22 N3 A B 25 -1.553 -2.279 -23.098 1.00 38.08 N
ATOM 23 C4 A B 25 -1.152 -3.562 -23.109 1.00 35.12 C
ATOM 24 P A B 26 4.195 -1.636 -20.583 1.00 38.03 P
ATOM 25 OP1 A B 26 5.350 -0.734 -20.358 1.00 37.44 O
ATOM 26 OP2 A B 26 4.247 -3.023 -20.057 1.00 35.99 O
ATOM 27 O5' A B 26 2.872 -0.885 -20.089 1.00 35.20 O
TER

Atoms:
OP1: (6.231,-11.269,-19.815)
OP2: (7.352,-9.239,-18.708)
C3': (2.977,-7.185,-19.991)
C1': (2.656,-6.359,-17.829)
C5': (3.627,-9.554,-19.229)
O6: (6.469,-1.941,-16.401)
O4': (3.003,-7.731,-17.762)
C8: (5.142,-5.865,-17.512)
C2: (2.927,-2.172,-16.699)
C6: (5.362,-2.464,-16.611)
C5: (5.082,-3.806,-16.976)
C4: (3.771,-4.183,-17.165)
P: (6.157,-10.095,-18.916)
C4': (2.733,-8.347,-19.043)
C2': (2.182,-6.110,-19.261)
O2': (0.779,-6.279,-19.369)
N1: (4.201,-1.698,-16.491)
N2: (1.922,-1.298,-16.536)
N3: (2.653,-3.421,-17.047)
N7: (5.939,-4.879,-17.200)
N9: (3.809,-5.518,-17.507)
O5': (4.972,-9.145,-19.397)
O3': (2.502,-7.437,-21.310)
OP1: (2.448,-6.911,-23.724)
OP2: (4.573,-7.858,-22.636)
C3': (2.955,-2.737,-22.548)
C1': (1.211,-3.276,-24.043)
C5': (4.459,-4.688,-23.266)
O4': (2.311,-4.148,-24.247)
C8: (-0.007,-5.406,-23.340)
O2': (1.983,-0.990,-23.949)
C6: (-3.200,-4.420,-22.244)
C5: (-1.891,-4.665,-22.711)
C4: (-1.152,-3.562,-23.109)
P: (3.379,-6.988,-22.577)
C4': (3.508,-3.575,-23.681)
C2': (1.704,-2.130,-23.165)
C2: (-2.804,-2.172,-22.640)
N1: (-3.634,-3.143,-22.223)
N3: (-1.553,-2.279,-23.098)
N6: (-4.033,-5.375,-21.826)
N7: (-1.157,-5.828,-22.862)
N9: (0.072,-4.046,-23.514)
O5': (3.893,-5.511,-22.237)
O3': (3.889,-1.755,-22.145)
Image (generated by PyMOL):
PyMOL image
show in jmol