Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Q9A:A12:A13
Extra
PDB:
ATOM 1 O3' C A 11 0.073 -48.029 -25.866 1.00 15.12 O
ATOM 2 P G A 12 -1.044 -49.166 -25.743 1.00 16.20 P
ATOM 3 OP1 G A 12 -1.195 -49.725 -27.106 1.00 18.40 O
ATOM 4 OP2 G A 12 -2.215 -48.650 -24.982 1.00 17.64 O
ATOM 5 O5' G A 12 -0.364 -50.272 -24.814 1.00 16.51 O
ATOM 6 C5' G A 12 0.688 -51.118 -25.327 1.00 18.00 C
ATOM 7 C4' G A 12 1.208 -51.985 -24.199 1.00 15.42 C
ATOM 8 O4' G A 12 1.768 -51.135 -23.150 1.00 15.00 O
ATOM 9 C3' G A 12 0.128 -52.758 -23.440 1.00 15.38 C
ATOM 10 O3' G A 12 -0.290 -53.901 -24.187 1.00 16.83 O
ATOM 11 C2' G A 12 0.890 -53.084 -22.152 1.00 14.50 C
ATOM 12 O2' G A 12 1.744 -54.193 -22.316 1.00 15.62 O
ATOM 13 C1' G A 12 1.669 -51.761 -21.914 1.00 13.14 C
ATOM 14 N9 G A 12 0.806 -50.992 -21.032 1.00 13.77 N
ATOM 15 C8 G A 12 -0.065 -49.994 -21.345 1.00 14.79 C
ATOM 16 N7 G A 12 -0.724 -49.573 -20.296 1.00 14.90 N
ATOM 17 C5 G A 12 -0.267 -50.351 -19.247 1.00 13.86 C
ATOM 18 C6 G A 12 -0.596 -50.395 -17.878 1.00 13.54 C
ATOM 19 O6 G A 12 -1.437 -49.692 -17.245 1.00 16.30 O
ATOM 20 N1 G A 12 0.129 -51.359 -17.194 1.00 13.14 N
ATOM 21 C2 G A 12 1.060 -52.201 -17.738 1.00 12.05 C
ATOM 22 N2 G A 12 1.672 -53.085 -16.939 1.00 13.08 N
ATOM 23 N3 G A 12 1.388 -52.167 -19.015 1.00 12.78 N
ATOM 24 C4 G A 12 0.685 -51.235 -19.691 1.00 13.17 C
ATOM 25 P A A 13 -1.868 -54.199 -24.422 1.00 18.15 P
ATOM 26 OP1 A A 13 -1.946 -55.461 -25.194 1.00 19.45 O
ATOM 27 OP2 A A 13 -2.552 -53.014 -24.962 1.00 19.76 O
ATOM 28 O5' A A 13 -2.316 -54.455 -22.916 1.00 17.36 O
TER
ATOM 1 O3' G B 12 -0.290 -53.901 -24.187 1.00 16.83 O
ATOM 2 P A B 13 -1.868 -54.199 -24.422 1.00 18.15 P
ATOM 3 OP1 A B 13 -1.946 -55.461 -25.194 1.00 19.45 O
ATOM 4 OP2 A B 13 -2.552 -53.014 -24.962 1.00 19.76 O
ATOM 5 O5' A B 13 -2.316 -54.455 -22.916 1.00 17.36 O
ATOM 6 C5' A B 13 -3.709 -54.531 -22.561 1.00 19.55 C
ATOM 7 C4' A B 13 -3.952 -55.668 -21.604 1.00 18.77 C
ATOM 8 O4' A B 13 -3.602 -56.923 -22.267 1.00 18.55 O
ATOM 9 C3' A B 13 -3.095 -55.684 -20.338 1.00 17.15 C
ATOM 10 O3' A B 13 -3.660 -54.884 -19.328 1.00 18.23 O
ATOM 11 C2' A B 13 -3.213 -57.160 -19.935 1.00 17.40 C
ATOM 12 O2' A B 13 -4.515 -57.474 -19.471 1.00 20.19 O
ATOM 13 C1' A B 13 -3.017 -57.773 -21.296 1.00 18.68 C
ATOM 14 N9 A B 13 -1.681 -58.120 -21.730 1.00 16.87 N
ATOM 15 C8 A B 13 -0.895 -57.509 -22.677 1.00 17.59 C
ATOM 16 N7 A B 13 0.267 -58.083 -22.838 1.00 17.53 N
ATOM 17 C5 A B 13 0.251 -59.144 -21.948 1.00 17.97 C
ATOM 18 C6 A B 13 1.187 -60.145 -21.634 1.00 19.09 C
ATOM 19 N6 A B 13 2.381 -60.236 -22.217 1.00 21.11 N
ATOM 20 N1 A B 13 0.843 -61.048 -20.691 1.00 20.57 N
ATOM 21 C2 A B 13 -0.354 -60.962 -20.105 1.00 22.14 C
ATOM 22 N3 A B 13 -1.315 -60.065 -20.321 1.00 20.34 N
ATOM 23 C4 A B 13 -0.942 -59.178 -21.259 1.00 17.39 C
ATOM 24 P G B 14 -2.856 -53.692 -18.641 1.00 16.16 P
ATOM 25 OP1 G B 14 -3.863 -52.921 -17.863 1.00 19.02 O
ATOM 26 OP2 G B 14 -2.010 -53.023 -19.653 1.00 17.32 O
ATOM 27 O5' G B 14 -1.861 -54.405 -17.608 1.00 15.09 O
TER
ATOM 2 P G A 12 -1.044 -49.166 -25.743 1.00 16.20 P
ATOM 3 OP1 G A 12 -1.195 -49.725 -27.106 1.00 18.40 O
ATOM 4 OP2 G A 12 -2.215 -48.650 -24.982 1.00 17.64 O
ATOM 5 O5' G A 12 -0.364 -50.272 -24.814 1.00 16.51 O
ATOM 6 C5' G A 12 0.688 -51.118 -25.327 1.00 18.00 C
ATOM 7 C4' G A 12 1.208 -51.985 -24.199 1.00 15.42 C
ATOM 8 O4' G A 12 1.768 -51.135 -23.150 1.00 15.00 O
ATOM 9 C3' G A 12 0.128 -52.758 -23.440 1.00 15.38 C
ATOM 10 O3' G A 12 -0.290 -53.901 -24.187 1.00 16.83 O
ATOM 11 C2' G A 12 0.890 -53.084 -22.152 1.00 14.50 C
ATOM 12 O2' G A 12 1.744 -54.193 -22.316 1.00 15.62 O
ATOM 13 C1' G A 12 1.669 -51.761 -21.914 1.00 13.14 C
ATOM 14 N9 G A 12 0.806 -50.992 -21.032 1.00 13.77 N
ATOM 15 C8 G A 12 -0.065 -49.994 -21.345 1.00 14.79 C
ATOM 16 N7 G A 12 -0.724 -49.573 -20.296 1.00 14.90 N
ATOM 17 C5 G A 12 -0.267 -50.351 -19.247 1.00 13.86 C
ATOM 18 C6 G A 12 -0.596 -50.395 -17.878 1.00 13.54 C
ATOM 19 O6 G A 12 -1.437 -49.692 -17.245 1.00 16.30 O
ATOM 20 N1 G A 12 0.129 -51.359 -17.194 1.00 13.14 N
ATOM 21 C2 G A 12 1.060 -52.201 -17.738 1.00 12.05 C
ATOM 22 N2 G A 12 1.672 -53.085 -16.939 1.00 13.08 N
ATOM 23 N3 G A 12 1.388 -52.167 -19.015 1.00 12.78 N
ATOM 24 C4 G A 12 0.685 -51.235 -19.691 1.00 13.17 C
ATOM 25 P A A 13 -1.868 -54.199 -24.422 1.00 18.15 P
ATOM 26 OP1 A A 13 -1.946 -55.461 -25.194 1.00 19.45 O
ATOM 27 OP2 A A 13 -2.552 -53.014 -24.962 1.00 19.76 O
ATOM 28 O5' A A 13 -2.316 -54.455 -22.916 1.00 17.36 O
TER
ATOM 1 O3' G B 12 -0.290 -53.901 -24.187 1.00 16.83 O
ATOM 2 P A B 13 -1.868 -54.199 -24.422 1.00 18.15 P
ATOM 3 OP1 A B 13 -1.946 -55.461 -25.194 1.00 19.45 O
ATOM 4 OP2 A B 13 -2.552 -53.014 -24.962 1.00 19.76 O
ATOM 5 O5' A B 13 -2.316 -54.455 -22.916 1.00 17.36 O
ATOM 6 C5' A B 13 -3.709 -54.531 -22.561 1.00 19.55 C
ATOM 7 C4' A B 13 -3.952 -55.668 -21.604 1.00 18.77 C
ATOM 8 O4' A B 13 -3.602 -56.923 -22.267 1.00 18.55 O
ATOM 9 C3' A B 13 -3.095 -55.684 -20.338 1.00 17.15 C
ATOM 10 O3' A B 13 -3.660 -54.884 -19.328 1.00 18.23 O
ATOM 11 C2' A B 13 -3.213 -57.160 -19.935 1.00 17.40 C
ATOM 12 O2' A B 13 -4.515 -57.474 -19.471 1.00 20.19 O
ATOM 13 C1' A B 13 -3.017 -57.773 -21.296 1.00 18.68 C
ATOM 14 N9 A B 13 -1.681 -58.120 -21.730 1.00 16.87 N
ATOM 15 C8 A B 13 -0.895 -57.509 -22.677 1.00 17.59 C
ATOM 16 N7 A B 13 0.267 -58.083 -22.838 1.00 17.53 N
ATOM 17 C5 A B 13 0.251 -59.144 -21.948 1.00 17.97 C
ATOM 18 C6 A B 13 1.187 -60.145 -21.634 1.00 19.09 C
ATOM 19 N6 A B 13 2.381 -60.236 -22.217 1.00 21.11 N
ATOM 20 N1 A B 13 0.843 -61.048 -20.691 1.00 20.57 N
ATOM 21 C2 A B 13 -0.354 -60.962 -20.105 1.00 22.14 C
ATOM 22 N3 A B 13 -1.315 -60.065 -20.321 1.00 20.34 N
ATOM 23 C4 A B 13 -0.942 -59.178 -21.259 1.00 17.39 C
ATOM 24 P G B 14 -2.856 -53.692 -18.641 1.00 16.16 P
ATOM 25 OP1 G B 14 -3.863 -52.921 -17.863 1.00 19.02 O
ATOM 26 OP2 G B 14 -2.010 -53.023 -19.653 1.00 17.32 O
ATOM 27 O5' G B 14 -1.861 -54.405 -17.608 1.00 15.09 O
TER
Atoms:
OP1: (-1.195,-49.725,-27.106)
OP2: (-2.215,-48.650,-24.982)
C3': (0.128,-52.758,-23.440)
C1': (1.669,-51.761,-21.914)
C5': (0.688,-51.118,-25.327)
O6: (-1.437,-49.692,-17.245)
O4': (1.768,-51.135,-23.150)
C8: (-0.065,-49.994,-21.345)
C2: (1.060,-52.201,-17.738)
C6: (-0.596,-50.395,-17.878)
C5: (-0.267,-50.351,-19.247)
C4: (0.685,-51.235,-19.691)
P: (-1.044,-49.166,-25.743)
C4': (1.208,-51.985,-24.199)
C2': (0.890,-53.084,-22.152)
O2': (1.744,-54.193,-22.316)
N1: (0.129,-51.359,-17.194)
N2: (1.672,-53.085,-16.939)
N3: (1.388,-52.167,-19.015)
N7: (-0.724,-49.573,-20.296)
N9: (0.806,-50.992,-21.032)
O5': (-0.364,-50.272,-24.814)
O3': (-0.290,-53.901,-24.187)
OP2: (-2.215,-48.650,-24.982)
C3': (0.128,-52.758,-23.440)
C1': (1.669,-51.761,-21.914)
C5': (0.688,-51.118,-25.327)
O6: (-1.437,-49.692,-17.245)
O4': (1.768,-51.135,-23.150)
C8: (-0.065,-49.994,-21.345)
C2: (1.060,-52.201,-17.738)
C6: (-0.596,-50.395,-17.878)
C5: (-0.267,-50.351,-19.247)
C4: (0.685,-51.235,-19.691)
P: (-1.044,-49.166,-25.743)
C4': (1.208,-51.985,-24.199)
C2': (0.890,-53.084,-22.152)
O2': (1.744,-54.193,-22.316)
N1: (0.129,-51.359,-17.194)
N2: (1.672,-53.085,-16.939)
N3: (1.388,-52.167,-19.015)
N7: (-0.724,-49.573,-20.296)
N9: (0.806,-50.992,-21.032)
O5': (-0.364,-50.272,-24.814)
O3': (-0.290,-53.901,-24.187)
OP1: (-1.946,-55.461,-25.194)
OP2: (-2.552,-53.014,-24.962)
C3': (-3.095,-55.684,-20.338)
C1': (-3.017,-57.773,-21.296)
C5': (-3.709,-54.531,-22.561)
O4': (-3.602,-56.923,-22.267)
C8: (-0.895,-57.509,-22.677)
O2': (-4.515,-57.474,-19.471)
C6: (1.187,-60.145,-21.634)
C5: (0.251,-59.144,-21.948)
C4: (-0.942,-59.178,-21.259)
P: (-1.868,-54.199,-24.422)
C4': (-3.952,-55.668,-21.604)
C2': (-3.213,-57.160,-19.935)
C2: (-0.354,-60.962,-20.105)
N1: (0.843,-61.048,-20.691)
N3: (-1.315,-60.065,-20.321)
N6: (2.381,-60.236,-22.217)
N7: (0.267,-58.083,-22.838)
N9: (-1.681,-58.120,-21.730)
O5': (-2.316,-54.455,-22.916)
O3': (-3.660,-54.884,-19.328)
OP2: (-2.552,-53.014,-24.962)
C3': (-3.095,-55.684,-20.338)
C1': (-3.017,-57.773,-21.296)
C5': (-3.709,-54.531,-22.561)
O4': (-3.602,-56.923,-22.267)
C8: (-0.895,-57.509,-22.677)
O2': (-4.515,-57.474,-19.471)
C6: (1.187,-60.145,-21.634)
C5: (0.251,-59.144,-21.948)
C4: (-0.942,-59.178,-21.259)
P: (-1.868,-54.199,-24.422)
C4': (-3.952,-55.668,-21.604)
C2': (-3.213,-57.160,-19.935)
C2: (-0.354,-60.962,-20.105)
N1: (0.843,-61.048,-20.691)
N3: (-1.315,-60.065,-20.321)
N6: (2.381,-60.236,-22.217)
N7: (0.267,-58.083,-22.838)
N9: (-1.681,-58.120,-21.730)
O5': (-2.316,-54.455,-22.916)
O3': (-3.660,-54.884,-19.328)
Image (generated by PyMOL):