Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DUL:B24:B25
Extra
PDB:
ATOM 1 O3' C A 23 21.471 -3.511 -0.869 1.00 26.97 O
ATOM 2 P G A 24 19.966 -3.427 -1.416 1.00 25.82 P
ATOM 3 OP1 G A 24 19.844 -4.425 -2.504 1.00 27.54 O
ATOM 4 OP2 G A 24 19.586 -2.007 -1.671 1.00 25.95 O
ATOM 5 O5' G A 24 19.073 -3.886 -0.185 1.00 25.08 O
ATOM 6 C5' G A 24 19.146 -5.218 0.307 1.00 24.16 C
ATOM 7 C4' G A 24 18.294 -5.357 1.539 1.00 22.84 C
ATOM 8 O4' G A 24 18.860 -4.549 2.605 1.00 23.08 O
ATOM 9 C3' G A 24 16.888 -4.802 1.416 1.00 24.38 C
ATOM 10 O3' G A 24 16.028 -5.684 0.700 1.00 25.07 O
ATOM 11 C2' G A 24 16.503 -4.635 2.879 1.00 24.67 C
ATOM 12 O2' G A 24 16.130 -5.845 3.512 1.00 24.86 O
ATOM 13 C1' G A 24 17.819 -4.114 3.466 1.00 24.00 C
ATOM 14 N9 G A 24 17.799 -2.655 3.490 1.00 24.64 N
ATOM 15 C8 G A 24 18.296 -1.783 2.549 1.00 25.59 C
ATOM 16 N7 G A 24 18.012 -0.534 2.811 1.00 25.18 N
ATOM 17 C5 G A 24 17.309 -0.587 4.008 1.00 26.18 C
ATOM 18 C6 G A 24 16.707 0.445 4.772 1.00 27.42 C
ATOM 19 O6 G A 24 16.665 1.662 4.533 1.00 28.33 O
ATOM 20 N1 G A 24 16.089 -0.056 5.912 1.00 26.47 N
ATOM 21 C2 G A 24 16.043 -1.381 6.269 1.00 28.63 C
ATOM 22 N2 G A 24 15.381 -1.670 7.398 1.00 26.07 N
ATOM 23 N3 G A 24 16.599 -2.354 5.565 1.00 25.72 N
ATOM 24 C4 G A 24 17.202 -1.889 4.454 1.00 25.84 C
ATOM 25 P A A 25 15.054 -5.085 -0.427 1.00 26.42 P
ATOM 26 OP1 A A 25 14.228 -6.196 -0.955 1.00 27.55 O
ATOM 27 OP2 A A 25 15.896 -4.292 -1.365 1.00 27.32 O
ATOM 28 O5' A A 25 14.096 -4.106 0.391 1.00 26.46 O
TER
ATOM 1 O3' G B 24 16.028 -5.684 0.700 1.00 25.07 O
ATOM 2 P A B 25 15.054 -5.085 -0.427 1.00 26.42 P
ATOM 3 OP1 A B 25 14.228 -6.196 -0.955 1.00 27.55 O
ATOM 4 OP2 A B 25 15.896 -4.292 -1.365 1.00 27.32 O
ATOM 5 O5' A B 25 14.096 -4.106 0.391 1.00 26.46 O
ATOM 6 C5' A B 25 13.304 -3.113 -0.265 1.00 29.22 C
ATOM 7 C4' A B 25 11.960 -2.994 0.418 1.00 29.26 C
ATOM 8 O4' A B 25 11.212 -4.227 0.217 1.00 29.63 O
ATOM 9 C3' A B 25 12.036 -2.815 1.927 1.00 30.12 C
ATOM 10 O3' A B 25 12.137 -1.430 2.253 1.00 31.69 O
ATOM 11 C2' A B 25 10.720 -3.427 2.396 1.00 30.32 C
ATOM 12 O2' A B 25 9.612 -2.558 2.246 1.00 29.94 O
ATOM 13 C1' A B 25 10.565 -4.596 1.421 1.00 29.01 C
ATOM 14 N9 A B 25 11.164 -5.850 1.887 1.00 27.16 N
ATOM 15 C8 A B 25 12.170 -6.570 1.289 1.00 26.67 C
ATOM 16 N7 A B 25 12.460 -7.692 1.914 1.00 27.15 N
ATOM 17 C5 A B 25 11.592 -7.704 2.998 1.00 24.78 C
ATOM 18 C6 A B 25 11.382 -8.636 4.029 1.00 25.37 C
ATOM 19 N6 A B 25 12.048 -9.789 4.131 1.00 24.69 N
ATOM 20 N1 A B 25 10.444 -8.349 4.955 1.00 24.89 N
ATOM 21 C2 A B 25 9.754 -7.201 4.837 1.00 26.25 C
ATOM 22 N3 A B 25 9.854 -6.252 3.906 1.00 25.61 N
ATOM 23 C4 A B 25 10.802 -6.567 3.005 1.00 25.34 C
ATOM 24 P A B 26 13.216 -0.935 3.345 1.00 32.35 P
ATOM 25 OP1 A B 26 13.147 0.556 3.370 1.00 34.52 O
ATOM 26 OP2 A B 26 14.507 -1.605 3.023 1.00 30.71 O
ATOM 27 O5' A B 26 12.658 -1.454 4.745 1.00 32.27 O
TER
ATOM 2 P G A 24 19.966 -3.427 -1.416 1.00 25.82 P
ATOM 3 OP1 G A 24 19.844 -4.425 -2.504 1.00 27.54 O
ATOM 4 OP2 G A 24 19.586 -2.007 -1.671 1.00 25.95 O
ATOM 5 O5' G A 24 19.073 -3.886 -0.185 1.00 25.08 O
ATOM 6 C5' G A 24 19.146 -5.218 0.307 1.00 24.16 C
ATOM 7 C4' G A 24 18.294 -5.357 1.539 1.00 22.84 C
ATOM 8 O4' G A 24 18.860 -4.549 2.605 1.00 23.08 O
ATOM 9 C3' G A 24 16.888 -4.802 1.416 1.00 24.38 C
ATOM 10 O3' G A 24 16.028 -5.684 0.700 1.00 25.07 O
ATOM 11 C2' G A 24 16.503 -4.635 2.879 1.00 24.67 C
ATOM 12 O2' G A 24 16.130 -5.845 3.512 1.00 24.86 O
ATOM 13 C1' G A 24 17.819 -4.114 3.466 1.00 24.00 C
ATOM 14 N9 G A 24 17.799 -2.655 3.490 1.00 24.64 N
ATOM 15 C8 G A 24 18.296 -1.783 2.549 1.00 25.59 C
ATOM 16 N7 G A 24 18.012 -0.534 2.811 1.00 25.18 N
ATOM 17 C5 G A 24 17.309 -0.587 4.008 1.00 26.18 C
ATOM 18 C6 G A 24 16.707 0.445 4.772 1.00 27.42 C
ATOM 19 O6 G A 24 16.665 1.662 4.533 1.00 28.33 O
ATOM 20 N1 G A 24 16.089 -0.056 5.912 1.00 26.47 N
ATOM 21 C2 G A 24 16.043 -1.381 6.269 1.00 28.63 C
ATOM 22 N2 G A 24 15.381 -1.670 7.398 1.00 26.07 N
ATOM 23 N3 G A 24 16.599 -2.354 5.565 1.00 25.72 N
ATOM 24 C4 G A 24 17.202 -1.889 4.454 1.00 25.84 C
ATOM 25 P A A 25 15.054 -5.085 -0.427 1.00 26.42 P
ATOM 26 OP1 A A 25 14.228 -6.196 -0.955 1.00 27.55 O
ATOM 27 OP2 A A 25 15.896 -4.292 -1.365 1.00 27.32 O
ATOM 28 O5' A A 25 14.096 -4.106 0.391 1.00 26.46 O
TER
ATOM 1 O3' G B 24 16.028 -5.684 0.700 1.00 25.07 O
ATOM 2 P A B 25 15.054 -5.085 -0.427 1.00 26.42 P
ATOM 3 OP1 A B 25 14.228 -6.196 -0.955 1.00 27.55 O
ATOM 4 OP2 A B 25 15.896 -4.292 -1.365 1.00 27.32 O
ATOM 5 O5' A B 25 14.096 -4.106 0.391 1.00 26.46 O
ATOM 6 C5' A B 25 13.304 -3.113 -0.265 1.00 29.22 C
ATOM 7 C4' A B 25 11.960 -2.994 0.418 1.00 29.26 C
ATOM 8 O4' A B 25 11.212 -4.227 0.217 1.00 29.63 O
ATOM 9 C3' A B 25 12.036 -2.815 1.927 1.00 30.12 C
ATOM 10 O3' A B 25 12.137 -1.430 2.253 1.00 31.69 O
ATOM 11 C2' A B 25 10.720 -3.427 2.396 1.00 30.32 C
ATOM 12 O2' A B 25 9.612 -2.558 2.246 1.00 29.94 O
ATOM 13 C1' A B 25 10.565 -4.596 1.421 1.00 29.01 C
ATOM 14 N9 A B 25 11.164 -5.850 1.887 1.00 27.16 N
ATOM 15 C8 A B 25 12.170 -6.570 1.289 1.00 26.67 C
ATOM 16 N7 A B 25 12.460 -7.692 1.914 1.00 27.15 N
ATOM 17 C5 A B 25 11.592 -7.704 2.998 1.00 24.78 C
ATOM 18 C6 A B 25 11.382 -8.636 4.029 1.00 25.37 C
ATOM 19 N6 A B 25 12.048 -9.789 4.131 1.00 24.69 N
ATOM 20 N1 A B 25 10.444 -8.349 4.955 1.00 24.89 N
ATOM 21 C2 A B 25 9.754 -7.201 4.837 1.00 26.25 C
ATOM 22 N3 A B 25 9.854 -6.252 3.906 1.00 25.61 N
ATOM 23 C4 A B 25 10.802 -6.567 3.005 1.00 25.34 C
ATOM 24 P A B 26 13.216 -0.935 3.345 1.00 32.35 P
ATOM 25 OP1 A B 26 13.147 0.556 3.370 1.00 34.52 O
ATOM 26 OP2 A B 26 14.507 -1.605 3.023 1.00 30.71 O
ATOM 27 O5' A B 26 12.658 -1.454 4.745 1.00 32.27 O
TER
Atoms:
OP1: (19.844,-4.425,-2.504)
OP2: (19.586,-2.007,-1.671)
C3': (16.888,-4.802,1.416)
C1': (17.819,-4.114,3.466)
C5': (19.146,-5.218,0.307)
O6: (16.665,1.662,4.533)
O4': (18.860,-4.549,2.605)
C8: (18.296,-1.783,2.549)
C2: (16.043,-1.381,6.269)
C6: (16.707,0.445,4.772)
C5: (17.309,-0.587,4.008)
C4: (17.202,-1.889,4.454)
P: (19.966,-3.427,-1.416)
C4': (18.294,-5.357,1.539)
C2': (16.503,-4.635,2.879)
O2': (16.130,-5.845,3.512)
N1: (16.089,-0.056,5.912)
N2: (15.381,-1.670,7.398)
N3: (16.599,-2.354,5.565)
N7: (18.012,-0.534,2.811)
N9: (17.799,-2.655,3.490)
O5': (19.073,-3.886,-0.185)
O3': (16.028,-5.684,0.700)
OP2: (19.586,-2.007,-1.671)
C3': (16.888,-4.802,1.416)
C1': (17.819,-4.114,3.466)
C5': (19.146,-5.218,0.307)
O6: (16.665,1.662,4.533)
O4': (18.860,-4.549,2.605)
C8: (18.296,-1.783,2.549)
C2: (16.043,-1.381,6.269)
C6: (16.707,0.445,4.772)
C5: (17.309,-0.587,4.008)
C4: (17.202,-1.889,4.454)
P: (19.966,-3.427,-1.416)
C4': (18.294,-5.357,1.539)
C2': (16.503,-4.635,2.879)
O2': (16.130,-5.845,3.512)
N1: (16.089,-0.056,5.912)
N2: (15.381,-1.670,7.398)
N3: (16.599,-2.354,5.565)
N7: (18.012,-0.534,2.811)
N9: (17.799,-2.655,3.490)
O5': (19.073,-3.886,-0.185)
O3': (16.028,-5.684,0.700)
OP1: (14.228,-6.196,-0.955)
OP2: (15.896,-4.292,-1.365)
C3': (12.036,-2.815,1.927)
C1': (10.565,-4.596,1.421)
C5': (13.304,-3.113,-0.265)
O4': (11.212,-4.227,0.217)
C8: (12.170,-6.570,1.289)
O2': (9.612,-2.558,2.246)
C6: (11.382,-8.636,4.029)
C5: (11.592,-7.704,2.998)
C4: (10.802,-6.567,3.005)
P: (15.054,-5.085,-0.427)
C4': (11.960,-2.994,0.418)
C2': (10.720,-3.427,2.396)
C2: (9.754,-7.201,4.837)
N1: (10.444,-8.349,4.955)
N3: (9.854,-6.252,3.906)
N6: (12.048,-9.789,4.131)
N7: (12.460,-7.692,1.914)
N9: (11.164,-5.850,1.887)
O5': (14.096,-4.106,0.391)
O3': (12.137,-1.430,2.253)
OP2: (15.896,-4.292,-1.365)
C3': (12.036,-2.815,1.927)
C1': (10.565,-4.596,1.421)
C5': (13.304,-3.113,-0.265)
O4': (11.212,-4.227,0.217)
C8: (12.170,-6.570,1.289)
O2': (9.612,-2.558,2.246)
C6: (11.382,-8.636,4.029)
C5: (11.592,-7.704,2.998)
C4: (10.802,-6.567,3.005)
P: (15.054,-5.085,-0.427)
C4': (11.960,-2.994,0.418)
C2': (10.720,-3.427,2.396)
C2: (9.754,-7.201,4.837)
N1: (10.444,-8.349,4.955)
N3: (9.854,-6.252,3.906)
N6: (12.048,-9.789,4.131)
N7: (12.460,-7.692,1.914)
N9: (11.164,-5.850,1.887)
O5': (14.096,-4.106,0.391)
O3': (12.137,-1.430,2.253)
Image (generated by PyMOL):