Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2PXD:B24:B25
Extra
PDB:
ATOM 1 O3' C A 23 83.884 -38.708 31.214 1.00 34.38 O
ATOM 2 P G A 24 82.361 -38.816 30.703 1.00 38.35 P
ATOM 3 OP1 G A 24 82.343 -39.920 29.713 1.00 32.27 O
ATOM 4 OP2 G A 24 81.852 -37.474 30.320 1.00 30.38 O
ATOM 5 O5' G A 24 81.552 -39.288 31.985 1.00 36.27 O
ATOM 6 C5' G A 24 81.528 -40.659 32.342 1.00 35.43 C
ATOM 7 C4' G A 24 80.699 -40.862 33.582 1.00 34.82 C
ATOM 8 O4' G A 24 81.265 -40.084 34.667 1.00 34.62 O
ATOM 9 C3' G A 24 79.270 -40.358 33.536 1.00 35.60 C
ATOM 10 O3' G A 24 78.425 -41.251 32.820 1.00 37.50 O
ATOM 11 C2' G A 24 78.937 -40.314 35.019 1.00 33.34 C
ATOM 12 O2' G A 24 78.688 -41.606 35.547 1.00 33.22 O
ATOM 13 C1' G A 24 80.238 -39.740 35.582 1.00 31.16 C
ATOM 14 N9 G A 24 80.162 -38.290 35.643 1.00 20.40 N
ATOM 15 C8 G A 24 80.666 -37.388 34.741 1.00 18.53 C
ATOM 16 N7 G A 24 80.328 -36.154 35.015 1.00 18.57 N
ATOM 17 C5 G A 24 79.577 -36.256 36.177 1.00 17.67 C
ATOM 18 C6 G A 24 78.908 -35.268 36.917 1.00 19.08 C
ATOM 19 O6 G A 24 78.802 -34.058 36.668 1.00 24.21 O
ATOM 20 N1 G A 24 78.293 -35.797 38.042 1.00 16.63 N
ATOM 21 C2 G A 24 78.305 -37.115 38.396 1.00 18.05 C
ATOM 22 N2 G A 24 77.676 -37.419 39.528 1.00 20.34 N
ATOM 23 N3 G A 24 78.895 -38.063 37.692 1.00 18.55 N
ATOM 24 C4 G A 24 79.506 -37.562 36.599 1.00 18.88 C
ATOM 25 P A A 25 77.459 -40.678 31.672 1.00 30.86 P
ATOM 26 OP1 A A 25 77.086 -41.841 30.840 1.00 29.29 O
ATOM 27 OP2 A A 25 78.080 -39.485 31.045 1.00 26.89 O
ATOM 28 O5' A A 25 76.178 -40.172 32.457 1.00 30.32 O
TER
ATOM 1 O3' G B 24 78.425 -41.251 32.820 1.00 37.50 O
ATOM 2 P A B 25 77.459 -40.678 31.672 1.00 30.86 P
ATOM 3 OP1 A B 25 77.086 -41.841 30.840 1.00 29.29 O
ATOM 4 OP2 A B 25 78.080 -39.485 31.045 1.00 26.89 O
ATOM 5 O5' A B 25 76.178 -40.172 32.457 1.00 30.32 O
ATOM 6 C5' A B 25 75.374 -39.123 31.930 1.00 30.15 C
ATOM 7 C4' A B 25 74.058 -39.081 32.657 1.00 29.13 C
ATOM 8 O4' A B 25 73.408 -40.368 32.495 1.00 26.50 O
ATOM 9 C3' A B 25 74.204 -38.903 34.158 1.00 30.39 C
ATOM 10 O3' A B 25 74.220 -37.519 34.476 1.00 32.07 O
ATOM 11 C2' A B 25 72.966 -39.605 34.687 1.00 28.52 C
ATOM 12 O2' A B 25 71.813 -38.807 34.523 1.00 32.17 O
ATOM 13 C1' A B 25 72.875 -40.788 33.729 1.00 25.23 C
ATOM 14 N9 A B 25 73.599 -41.989 34.134 1.00 18.96 N
ATOM 15 C8 A B 25 74.584 -42.652 33.441 1.00 17.29 C
ATOM 16 N7 A B 25 74.936 -43.792 33.988 1.00 14.70 N
ATOM 17 C5 A B 25 74.153 -43.865 35.128 1.00 13.24 C
ATOM 18 C6 A B 25 74.021 -44.840 36.109 1.00 14.96 C
ATOM 19 N6 A B 25 74.689 -46.006 36.090 1.00 15.68 N
ATOM 20 N1 A B 25 73.166 -44.596 37.124 1.00 14.15 N
ATOM 21 C2 A B 25 72.492 -43.445 37.131 1.00 13.56 C
ATOM 22 N3 A B 25 72.516 -42.459 36.255 1.00 13.00 N
ATOM 23 C4 A B 25 73.367 -42.738 35.260 1.00 14.97 C
ATOM 24 P A B 26 75.269 -36.968 35.554 1.00 36.91 P
ATOM 25 OP1 A B 26 75.049 -35.501 35.680 1.00 29.80 O
ATOM 26 OP2 A B 26 76.597 -37.475 35.151 1.00 28.80 O
ATOM 27 O5' A B 26 74.800 -37.668 36.904 1.00 37.03 O
TER
ATOM 2 P G A 24 82.361 -38.816 30.703 1.00 38.35 P
ATOM 3 OP1 G A 24 82.343 -39.920 29.713 1.00 32.27 O
ATOM 4 OP2 G A 24 81.852 -37.474 30.320 1.00 30.38 O
ATOM 5 O5' G A 24 81.552 -39.288 31.985 1.00 36.27 O
ATOM 6 C5' G A 24 81.528 -40.659 32.342 1.00 35.43 C
ATOM 7 C4' G A 24 80.699 -40.862 33.582 1.00 34.82 C
ATOM 8 O4' G A 24 81.265 -40.084 34.667 1.00 34.62 O
ATOM 9 C3' G A 24 79.270 -40.358 33.536 1.00 35.60 C
ATOM 10 O3' G A 24 78.425 -41.251 32.820 1.00 37.50 O
ATOM 11 C2' G A 24 78.937 -40.314 35.019 1.00 33.34 C
ATOM 12 O2' G A 24 78.688 -41.606 35.547 1.00 33.22 O
ATOM 13 C1' G A 24 80.238 -39.740 35.582 1.00 31.16 C
ATOM 14 N9 G A 24 80.162 -38.290 35.643 1.00 20.40 N
ATOM 15 C8 G A 24 80.666 -37.388 34.741 1.00 18.53 C
ATOM 16 N7 G A 24 80.328 -36.154 35.015 1.00 18.57 N
ATOM 17 C5 G A 24 79.577 -36.256 36.177 1.00 17.67 C
ATOM 18 C6 G A 24 78.908 -35.268 36.917 1.00 19.08 C
ATOM 19 O6 G A 24 78.802 -34.058 36.668 1.00 24.21 O
ATOM 20 N1 G A 24 78.293 -35.797 38.042 1.00 16.63 N
ATOM 21 C2 G A 24 78.305 -37.115 38.396 1.00 18.05 C
ATOM 22 N2 G A 24 77.676 -37.419 39.528 1.00 20.34 N
ATOM 23 N3 G A 24 78.895 -38.063 37.692 1.00 18.55 N
ATOM 24 C4 G A 24 79.506 -37.562 36.599 1.00 18.88 C
ATOM 25 P A A 25 77.459 -40.678 31.672 1.00 30.86 P
ATOM 26 OP1 A A 25 77.086 -41.841 30.840 1.00 29.29 O
ATOM 27 OP2 A A 25 78.080 -39.485 31.045 1.00 26.89 O
ATOM 28 O5' A A 25 76.178 -40.172 32.457 1.00 30.32 O
TER
ATOM 1 O3' G B 24 78.425 -41.251 32.820 1.00 37.50 O
ATOM 2 P A B 25 77.459 -40.678 31.672 1.00 30.86 P
ATOM 3 OP1 A B 25 77.086 -41.841 30.840 1.00 29.29 O
ATOM 4 OP2 A B 25 78.080 -39.485 31.045 1.00 26.89 O
ATOM 5 O5' A B 25 76.178 -40.172 32.457 1.00 30.32 O
ATOM 6 C5' A B 25 75.374 -39.123 31.930 1.00 30.15 C
ATOM 7 C4' A B 25 74.058 -39.081 32.657 1.00 29.13 C
ATOM 8 O4' A B 25 73.408 -40.368 32.495 1.00 26.50 O
ATOM 9 C3' A B 25 74.204 -38.903 34.158 1.00 30.39 C
ATOM 10 O3' A B 25 74.220 -37.519 34.476 1.00 32.07 O
ATOM 11 C2' A B 25 72.966 -39.605 34.687 1.00 28.52 C
ATOM 12 O2' A B 25 71.813 -38.807 34.523 1.00 32.17 O
ATOM 13 C1' A B 25 72.875 -40.788 33.729 1.00 25.23 C
ATOM 14 N9 A B 25 73.599 -41.989 34.134 1.00 18.96 N
ATOM 15 C8 A B 25 74.584 -42.652 33.441 1.00 17.29 C
ATOM 16 N7 A B 25 74.936 -43.792 33.988 1.00 14.70 N
ATOM 17 C5 A B 25 74.153 -43.865 35.128 1.00 13.24 C
ATOM 18 C6 A B 25 74.021 -44.840 36.109 1.00 14.96 C
ATOM 19 N6 A B 25 74.689 -46.006 36.090 1.00 15.68 N
ATOM 20 N1 A B 25 73.166 -44.596 37.124 1.00 14.15 N
ATOM 21 C2 A B 25 72.492 -43.445 37.131 1.00 13.56 C
ATOM 22 N3 A B 25 72.516 -42.459 36.255 1.00 13.00 N
ATOM 23 C4 A B 25 73.367 -42.738 35.260 1.00 14.97 C
ATOM 24 P A B 26 75.269 -36.968 35.554 1.00 36.91 P
ATOM 25 OP1 A B 26 75.049 -35.501 35.680 1.00 29.80 O
ATOM 26 OP2 A B 26 76.597 -37.475 35.151 1.00 28.80 O
ATOM 27 O5' A B 26 74.800 -37.668 36.904 1.00 37.03 O
TER
Atoms:
OP1: (82.343,-39.920,29.713)
OP2: (81.852,-37.474,30.320)
C3': (79.270,-40.358,33.536)
C1': (80.238,-39.740,35.582)
C5': (81.528,-40.659,32.342)
O6: (78.802,-34.058,36.668)
O4': (81.265,-40.084,34.667)
C8: (80.666,-37.388,34.741)
C2: (78.305,-37.115,38.396)
C6: (78.908,-35.268,36.917)
C5: (79.577,-36.256,36.177)
C4: (79.506,-37.562,36.599)
P: (82.361,-38.816,30.703)
C4': (80.699,-40.862,33.582)
C2': (78.937,-40.314,35.019)
O2': (78.688,-41.606,35.547)
N1: (78.293,-35.797,38.042)
N2: (77.676,-37.419,39.528)
N3: (78.895,-38.063,37.692)
N7: (80.328,-36.154,35.015)
N9: (80.162,-38.290,35.643)
O5': (81.552,-39.288,31.985)
O3': (78.425,-41.251,32.820)
OP2: (81.852,-37.474,30.320)
C3': (79.270,-40.358,33.536)
C1': (80.238,-39.740,35.582)
C5': (81.528,-40.659,32.342)
O6: (78.802,-34.058,36.668)
O4': (81.265,-40.084,34.667)
C8: (80.666,-37.388,34.741)
C2: (78.305,-37.115,38.396)
C6: (78.908,-35.268,36.917)
C5: (79.577,-36.256,36.177)
C4: (79.506,-37.562,36.599)
P: (82.361,-38.816,30.703)
C4': (80.699,-40.862,33.582)
C2': (78.937,-40.314,35.019)
O2': (78.688,-41.606,35.547)
N1: (78.293,-35.797,38.042)
N2: (77.676,-37.419,39.528)
N3: (78.895,-38.063,37.692)
N7: (80.328,-36.154,35.015)
N9: (80.162,-38.290,35.643)
O5': (81.552,-39.288,31.985)
O3': (78.425,-41.251,32.820)
OP1: (77.086,-41.841,30.840)
OP2: (78.080,-39.485,31.045)
C3': (74.204,-38.903,34.158)
C1': (72.875,-40.788,33.729)
C5': (75.374,-39.123,31.930)
O4': (73.408,-40.368,32.495)
C8: (74.584,-42.652,33.441)
O2': (71.813,-38.807,34.523)
C6: (74.021,-44.840,36.109)
C5: (74.153,-43.865,35.128)
C4: (73.367,-42.738,35.260)
P: (77.459,-40.678,31.672)
C4': (74.058,-39.081,32.657)
C2': (72.966,-39.605,34.687)
C2: (72.492,-43.445,37.131)
N1: (73.166,-44.596,37.124)
N3: (72.516,-42.459,36.255)
N6: (74.689,-46.006,36.090)
N7: (74.936,-43.792,33.988)
N9: (73.599,-41.989,34.134)
O5': (76.178,-40.172,32.457)
O3': (74.220,-37.519,34.476)
OP2: (78.080,-39.485,31.045)
C3': (74.204,-38.903,34.158)
C1': (72.875,-40.788,33.729)
C5': (75.374,-39.123,31.930)
O4': (73.408,-40.368,32.495)
C8: (74.584,-42.652,33.441)
O2': (71.813,-38.807,34.523)
C6: (74.021,-44.840,36.109)
C5: (74.153,-43.865,35.128)
C4: (73.367,-42.738,35.260)
P: (77.459,-40.678,31.672)
C4': (74.058,-39.081,32.657)
C2': (72.966,-39.605,34.687)
C2: (72.492,-43.445,37.131)
N1: (73.166,-44.596,37.124)
N3: (72.516,-42.459,36.255)
N6: (74.689,-46.006,36.090)
N7: (74.936,-43.792,33.988)
N9: (73.599,-41.989,34.134)
O5': (76.178,-40.172,32.457)
O3': (74.220,-37.519,34.476)
Image (generated by PyMOL):