Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:A27:A28
Extra
PDB:
ATOM 1 O3' U A 26 0.104 13.900 -30.546 1.00 35.93 O
ATOM 2 P G A 27 -0.771 12.881 -31.411 1.00 38.20 P
ATOM 3 OP1 G A 27 -0.058 11.583 -31.428 1.00 35.52 O
ATOM 4 OP2 G A 27 -1.140 13.547 -32.680 1.00 35.29 O
ATOM 5 O5' G A 27 -2.094 12.695 -30.536 1.00 36.22 O
ATOM 6 C5' G A 27 -2.015 12.083 -29.256 1.00 36.62 C
ATOM 7 C4' G A 27 -3.302 12.294 -28.478 1.00 38.28 C
ATOM 8 O4' G A 27 -3.532 13.712 -28.278 1.00 31.60 O
ATOM 9 C3' G A 27 -4.574 11.818 -29.164 1.00 35.35 C
ATOM 10 O3' G A 27 -4.728 10.407 -29.033 1.00 33.44 O
ATOM 11 C2' G A 27 -5.610 12.592 -28.353 1.00 36.39 C
ATOM 12 O2' G A 27 -5.859 12.020 -27.082 1.00 34.68 O
ATOM 13 C1' G A 27 -4.926 13.951 -28.218 1.00 33.14 C
ATOM 14 N9 G A 27 -5.323 14.828 -29.313 1.00 37.27 N
ATOM 15 C8 G A 27 -4.785 14.871 -30.577 1.00 37.10 C
ATOM 16 N7 G A 27 -5.361 15.745 -31.356 1.00 39.84 N
ATOM 17 C5 G A 27 -6.347 16.310 -30.559 1.00 35.97 C
ATOM 18 C6 G A 27 -7.293 17.315 -30.860 1.00 39.61 C
ATOM 19 O6 G A 27 -7.446 17.921 -31.929 1.00 39.99 O
ATOM 20 N1 G A 27 -8.112 17.600 -29.769 1.00 35.43 N
ATOM 21 C2 G A 27 -8.029 16.986 -28.542 1.00 34.58 C
ATOM 22 N2 G A 27 -8.907 17.392 -27.610 1.00 32.59 N
ATOM 23 N3 G A 27 -7.146 16.041 -28.248 1.00 33.53 N
ATOM 24 C4 G A 27 -6.341 15.755 -29.300 1.00 34.88 C
ATOM 25 P A A 28 -5.361 9.543 -30.227 1.00 36.72 P
ATOM 26 OP1 A A 28 -5.128 8.112 -29.922 1.00 42.50 O
ATOM 27 OP2 A A 28 -4.886 10.105 -31.510 1.00 38.20 O
ATOM 28 O5' A A 28 -6.924 9.836 -30.058 1.00 34.61 O
TER
ATOM 1 O3' G B 27 -4.728 10.407 -29.033 1.00 33.44 O
ATOM 2 P A B 28 -5.361 9.543 -30.227 1.00 36.72 P
ATOM 3 OP1 A B 28 -5.128 8.112 -29.922 1.00 42.50 O
ATOM 4 OP2 A B 28 -4.886 10.105 -31.510 1.00 38.20 O
ATOM 5 O5' A B 28 -6.924 9.836 -30.058 1.00 34.61 O
ATOM 6 C5' A B 28 -7.865 9.359 -31.002 1.00 35.71 C
ATOM 7 C4' A B 28 -9.275 9.676 -30.539 1.00 37.41 C
ATOM 8 O4' A B 28 -9.586 8.905 -29.355 1.00 36.90 O
ATOM 9 C3' A B 28 -9.498 11.121 -30.126 1.00 36.63 C
ATOM 10 O3' A B 28 -9.850 11.887 -31.266 1.00 38.11 O
ATOM 11 C2' A B 28 -10.669 11.009 -29.157 1.00 35.36 C
ATOM 12 O2' A B 28 -11.919 11.026 -29.820 1.00 39.08 O
ATOM 13 C1' A B 28 -10.449 9.644 -28.511 1.00 37.54 C
ATOM 14 N9 A B 28 -9.859 9.693 -27.174 1.00 36.39 N
ATOM 15 C8 A B 28 -8.668 9.146 -26.783 1.00 36.86 C
ATOM 16 N7 A B 28 -8.388 9.336 -25.516 1.00 33.99 N
ATOM 17 C5 A B 28 -9.469 10.059 -25.040 1.00 34.57 C
ATOM 18 C6 A B 28 -9.781 10.575 -23.766 1.00 30.61 C
ATOM 19 N6 A B 28 -8.989 10.431 -22.697 1.00 28.39 N
ATOM 20 N1 A B 28 -10.942 11.248 -23.631 1.00 31.94 N
ATOM 21 C2 A B 28 -11.733 11.391 -24.699 1.00 33.41 C
ATOM 22 N3 A B 28 -11.547 10.950 -25.942 1.00 34.28 N
ATOM 23 C4 A B 28 -10.387 10.286 -26.048 1.00 35.59 C
ATOM 24 P G B 29 -9.333 13.395 -31.416 1.00 37.26 P
ATOM 25 OP1 G B 29 -9.667 13.855 -32.782 1.00 37.85 O
ATOM 26 OP2 G B 29 -7.933 13.451 -30.942 1.00 33.66 O
ATOM 27 O5' G B 29 -10.265 14.181 -30.386 1.00 35.16 O
TER
ATOM 2 P G A 27 -0.771 12.881 -31.411 1.00 38.20 P
ATOM 3 OP1 G A 27 -0.058 11.583 -31.428 1.00 35.52 O
ATOM 4 OP2 G A 27 -1.140 13.547 -32.680 1.00 35.29 O
ATOM 5 O5' G A 27 -2.094 12.695 -30.536 1.00 36.22 O
ATOM 6 C5' G A 27 -2.015 12.083 -29.256 1.00 36.62 C
ATOM 7 C4' G A 27 -3.302 12.294 -28.478 1.00 38.28 C
ATOM 8 O4' G A 27 -3.532 13.712 -28.278 1.00 31.60 O
ATOM 9 C3' G A 27 -4.574 11.818 -29.164 1.00 35.35 C
ATOM 10 O3' G A 27 -4.728 10.407 -29.033 1.00 33.44 O
ATOM 11 C2' G A 27 -5.610 12.592 -28.353 1.00 36.39 C
ATOM 12 O2' G A 27 -5.859 12.020 -27.082 1.00 34.68 O
ATOM 13 C1' G A 27 -4.926 13.951 -28.218 1.00 33.14 C
ATOM 14 N9 G A 27 -5.323 14.828 -29.313 1.00 37.27 N
ATOM 15 C8 G A 27 -4.785 14.871 -30.577 1.00 37.10 C
ATOM 16 N7 G A 27 -5.361 15.745 -31.356 1.00 39.84 N
ATOM 17 C5 G A 27 -6.347 16.310 -30.559 1.00 35.97 C
ATOM 18 C6 G A 27 -7.293 17.315 -30.860 1.00 39.61 C
ATOM 19 O6 G A 27 -7.446 17.921 -31.929 1.00 39.99 O
ATOM 20 N1 G A 27 -8.112 17.600 -29.769 1.00 35.43 N
ATOM 21 C2 G A 27 -8.029 16.986 -28.542 1.00 34.58 C
ATOM 22 N2 G A 27 -8.907 17.392 -27.610 1.00 32.59 N
ATOM 23 N3 G A 27 -7.146 16.041 -28.248 1.00 33.53 N
ATOM 24 C4 G A 27 -6.341 15.755 -29.300 1.00 34.88 C
ATOM 25 P A A 28 -5.361 9.543 -30.227 1.00 36.72 P
ATOM 26 OP1 A A 28 -5.128 8.112 -29.922 1.00 42.50 O
ATOM 27 OP2 A A 28 -4.886 10.105 -31.510 1.00 38.20 O
ATOM 28 O5' A A 28 -6.924 9.836 -30.058 1.00 34.61 O
TER
ATOM 1 O3' G B 27 -4.728 10.407 -29.033 1.00 33.44 O
ATOM 2 P A B 28 -5.361 9.543 -30.227 1.00 36.72 P
ATOM 3 OP1 A B 28 -5.128 8.112 -29.922 1.00 42.50 O
ATOM 4 OP2 A B 28 -4.886 10.105 -31.510 1.00 38.20 O
ATOM 5 O5' A B 28 -6.924 9.836 -30.058 1.00 34.61 O
ATOM 6 C5' A B 28 -7.865 9.359 -31.002 1.00 35.71 C
ATOM 7 C4' A B 28 -9.275 9.676 -30.539 1.00 37.41 C
ATOM 8 O4' A B 28 -9.586 8.905 -29.355 1.00 36.90 O
ATOM 9 C3' A B 28 -9.498 11.121 -30.126 1.00 36.63 C
ATOM 10 O3' A B 28 -9.850 11.887 -31.266 1.00 38.11 O
ATOM 11 C2' A B 28 -10.669 11.009 -29.157 1.00 35.36 C
ATOM 12 O2' A B 28 -11.919 11.026 -29.820 1.00 39.08 O
ATOM 13 C1' A B 28 -10.449 9.644 -28.511 1.00 37.54 C
ATOM 14 N9 A B 28 -9.859 9.693 -27.174 1.00 36.39 N
ATOM 15 C8 A B 28 -8.668 9.146 -26.783 1.00 36.86 C
ATOM 16 N7 A B 28 -8.388 9.336 -25.516 1.00 33.99 N
ATOM 17 C5 A B 28 -9.469 10.059 -25.040 1.00 34.57 C
ATOM 18 C6 A B 28 -9.781 10.575 -23.766 1.00 30.61 C
ATOM 19 N6 A B 28 -8.989 10.431 -22.697 1.00 28.39 N
ATOM 20 N1 A B 28 -10.942 11.248 -23.631 1.00 31.94 N
ATOM 21 C2 A B 28 -11.733 11.391 -24.699 1.00 33.41 C
ATOM 22 N3 A B 28 -11.547 10.950 -25.942 1.00 34.28 N
ATOM 23 C4 A B 28 -10.387 10.286 -26.048 1.00 35.59 C
ATOM 24 P G B 29 -9.333 13.395 -31.416 1.00 37.26 P
ATOM 25 OP1 G B 29 -9.667 13.855 -32.782 1.00 37.85 O
ATOM 26 OP2 G B 29 -7.933 13.451 -30.942 1.00 33.66 O
ATOM 27 O5' G B 29 -10.265 14.181 -30.386 1.00 35.16 O
TER
Atoms:
OP1: (-0.058,11.583,-31.428)
OP2: (-1.140,13.547,-32.680)
C3': (-4.574,11.818,-29.164)
C1': (-4.926,13.951,-28.218)
C5': (-2.015,12.083,-29.256)
O6: (-7.446,17.921,-31.929)
O4': (-3.532,13.712,-28.278)
C8: (-4.785,14.871,-30.577)
C2: (-8.029,16.986,-28.542)
C6: (-7.293,17.315,-30.860)
C5: (-6.347,16.310,-30.559)
C4: (-6.341,15.755,-29.300)
P: (-0.771,12.881,-31.411)
C4': (-3.302,12.294,-28.478)
C2': (-5.610,12.592,-28.353)
O2': (-5.859,12.020,-27.082)
N1: (-8.112,17.600,-29.769)
N2: (-8.907,17.392,-27.610)
N3: (-7.146,16.041,-28.248)
N7: (-5.361,15.745,-31.356)
N9: (-5.323,14.828,-29.313)
O5': (-2.094,12.695,-30.536)
O3': (-4.728,10.407,-29.033)
OP2: (-1.140,13.547,-32.680)
C3': (-4.574,11.818,-29.164)
C1': (-4.926,13.951,-28.218)
C5': (-2.015,12.083,-29.256)
O6: (-7.446,17.921,-31.929)
O4': (-3.532,13.712,-28.278)
C8: (-4.785,14.871,-30.577)
C2: (-8.029,16.986,-28.542)
C6: (-7.293,17.315,-30.860)
C5: (-6.347,16.310,-30.559)
C4: (-6.341,15.755,-29.300)
P: (-0.771,12.881,-31.411)
C4': (-3.302,12.294,-28.478)
C2': (-5.610,12.592,-28.353)
O2': (-5.859,12.020,-27.082)
N1: (-8.112,17.600,-29.769)
N2: (-8.907,17.392,-27.610)
N3: (-7.146,16.041,-28.248)
N7: (-5.361,15.745,-31.356)
N9: (-5.323,14.828,-29.313)
O5': (-2.094,12.695,-30.536)
O3': (-4.728,10.407,-29.033)
OP1: (-5.128,8.112,-29.922)
OP2: (-4.886,10.105,-31.510)
C3': (-9.498,11.121,-30.126)
C1': (-10.449,9.644,-28.511)
C5': (-7.865,9.359,-31.002)
O4': (-9.586,8.905,-29.355)
C8: (-8.668,9.146,-26.783)
O2': (-11.919,11.026,-29.820)
C6: (-9.781,10.575,-23.766)
C5: (-9.469,10.059,-25.040)
C4: (-10.387,10.286,-26.048)
P: (-5.361,9.543,-30.227)
C4': (-9.275,9.676,-30.539)
C2': (-10.669,11.009,-29.157)
C2: (-11.733,11.391,-24.699)
N1: (-10.942,11.248,-23.631)
N3: (-11.547,10.950,-25.942)
N6: (-8.989,10.431,-22.697)
N7: (-8.388,9.336,-25.516)
N9: (-9.859,9.693,-27.174)
O5': (-6.924,9.836,-30.058)
O3': (-9.850,11.887,-31.266)
OP2: (-4.886,10.105,-31.510)
C3': (-9.498,11.121,-30.126)
C1': (-10.449,9.644,-28.511)
C5': (-7.865,9.359,-31.002)
O4': (-9.586,8.905,-29.355)
C8: (-8.668,9.146,-26.783)
O2': (-11.919,11.026,-29.820)
C6: (-9.781,10.575,-23.766)
C5: (-9.469,10.059,-25.040)
C4: (-10.387,10.286,-26.048)
P: (-5.361,9.543,-30.227)
C4': (-9.275,9.676,-30.539)
C2': (-10.669,11.009,-29.157)
C2: (-11.733,11.391,-24.699)
N1: (-10.942,11.248,-23.631)
N3: (-11.547,10.950,-25.942)
N6: (-8.989,10.431,-22.697)
N7: (-8.388,9.336,-25.516)
N9: (-9.859,9.693,-27.174)
O5': (-6.924,9.836,-30.058)
O3': (-9.850,11.887,-31.266)
Image (generated by PyMOL):