Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A513:A514
Extra
PDB:
ATOM 1 O3' U A 512 35.993-112.922 -36.770 1.00 53.71 O
ATOM 2 P G A 513 36.993-114.040 -37.347 1.00 30.87 P
ATOM 3 OP1 G A 513 36.578-114.303 -38.740 1.00 68.96 O
ATOM 4 OP2 G A 513 36.998-115.153 -36.387 1.00 69.19 O
ATOM 5 O5' G A 513 38.394-113.308 -37.330 1.00 50.56 O
ATOM 6 C5' G A 513 38.611-112.115 -38.086 1.00 52.12 C
ATOM 7 C4' G A 513 39.979-111.525 -37.831 1.00 36.72 C
ATOM 8 O4' G A 513 40.008-110.882 -36.532 1.00 41.63 O
ATOM 9 C3' G A 513 41.119-112.515 -37.758 1.00 39.50 C
ATOM 10 O3' G A 513 41.585-112.916 -39.029 1.00 43.37 O
ATOM 11 C2' G A 513 42.157-111.758 -36.964 1.00 40.52 C
ATOM 12 O2' G A 513 42.816-110.818 -37.791 1.00 48.42 O
ATOM 13 C1' G A 513 41.291-111.004 -35.966 1.00 37.92 C
ATOM 14 N9 G A 513 41.203-111.735 -34.690 1.00 45.85 N
ATOM 15 C8 G A 513 40.288-112.645 -34.246 1.00 44.74 C
ATOM 16 N7 G A 513 40.579-113.125 -33.060 1.00 44.99 N
ATOM 17 C5 G A 513 41.759-112.514 -32.695 1.00 48.44 C
ATOM 18 C6 G A 513 42.566-112.639 -31.527 1.00 54.29 C
ATOM 19 O6 G A 513 42.410-113.342 -30.514 1.00 61.26 O
ATOM 20 N1 G A 513 43.676-111.813 -31.599 1.00 47.92 N
ATOM 21 C2 G A 513 43.981-110.984 -32.647 1.00 46.90 C
ATOM 22 N2 G A 513 45.104-110.254 -32.543 1.00 49.09 N
ATOM 23 N3 G A 513 43.248-110.871 -33.731 1.00 47.14 N
ATOM 24 C4 G A 513 42.154-111.656 -33.694 1.00 49.49 C
ATOM 25 P A A 514 41.866-114.468 -39.319 1.00 47.50 P
ATOM 26 OP1 A A 514 41.806-114.652 -40.788 1.00 54.43 O
ATOM 27 OP2 A A 514 40.946-115.239 -38.456 1.00 52.23 O
ATOM 28 O5' A A 514 43.341-114.689 -38.812 1.00 37.43 O
TER
ATOM 1 O3' G B 513 41.585-112.916 -39.029 1.00 43.37 O
ATOM 2 P A B 514 41.866-114.468 -39.319 1.00 47.50 P
ATOM 3 OP1 A B 514 41.806-114.652 -40.788 1.00 54.43 O
ATOM 4 OP2 A B 514 40.946-115.239 -38.456 1.00 52.23 O
ATOM 5 O5' A B 514 43.341-114.689 -38.812 1.00 37.43 O
ATOM 6 C5' A B 514 43.770-115.977 -38.415 1.00 34.16 C
ATOM 7 C4' A B 514 45.253-116.003 -38.153 1.00 43.46 C
ATOM 8 O4' A B 514 45.963-115.558 -39.338 1.00 40.98 O
ATOM 9 C3' A B 514 45.742-115.085 -37.042 1.00 42.02 C
ATOM 10 O3' A B 514 45.657-115.687 -35.759 1.00 42.84 O
ATOM 11 C2' A B 514 47.164-114.786 -37.466 1.00 44.21 C
ATOM 12 O2' A B 514 47.996-115.883 -37.161 1.00 53.62 O
ATOM 13 C1' A B 514 47.026-114.718 -38.978 1.00 38.36 C
ATOM 14 N9 A B 514 46.723-113.354 -39.447 1.00 41.55 N
ATOM 15 C8 A B 514 45.594-112.919 -40.091 1.00 48.94 C
ATOM 16 N7 A B 514 45.601-111.641 -40.395 1.00 49.40 N
ATOM 17 C5 A B 514 46.819-111.202 -39.915 1.00 45.27 C
ATOM 18 C6 A B 514 47.419-109.943 -39.913 1.00 41.70 C
ATOM 19 N6 A B 514 46.857-108.855 -40.422 1.00 45.54 N
ATOM 20 N1 A B 514 48.623-109.825 -39.335 1.00 37.98 N
ATOM 21 C2 A B 514 49.177-110.923 -38.815 1.00 45.33 C
ATOM 22 N3 A B 514 48.724-112.178 -38.762 1.00 46.39 N
ATOM 23 C4 A B 514 47.515-112.243 -39.332 1.00 46.80 C
ATOM 24 P A B 515 44.722-115.052 -34.616 1.00 43.64 P
ATOM 25 OP1 A B 515 44.466-116.109 -33.620 1.00 52.27 O
ATOM 26 OP2 A B 515 43.561-114.418 -35.298 1.00 52.16 O
ATOM 27 O5' A B 515 45.656-113.958 -33.985 1.00 45.86 O
TER
ATOM 2 P G A 513 36.993-114.040 -37.347 1.00 30.87 P
ATOM 3 OP1 G A 513 36.578-114.303 -38.740 1.00 68.96 O
ATOM 4 OP2 G A 513 36.998-115.153 -36.387 1.00 69.19 O
ATOM 5 O5' G A 513 38.394-113.308 -37.330 1.00 50.56 O
ATOM 6 C5' G A 513 38.611-112.115 -38.086 1.00 52.12 C
ATOM 7 C4' G A 513 39.979-111.525 -37.831 1.00 36.72 C
ATOM 8 O4' G A 513 40.008-110.882 -36.532 1.00 41.63 O
ATOM 9 C3' G A 513 41.119-112.515 -37.758 1.00 39.50 C
ATOM 10 O3' G A 513 41.585-112.916 -39.029 1.00 43.37 O
ATOM 11 C2' G A 513 42.157-111.758 -36.964 1.00 40.52 C
ATOM 12 O2' G A 513 42.816-110.818 -37.791 1.00 48.42 O
ATOM 13 C1' G A 513 41.291-111.004 -35.966 1.00 37.92 C
ATOM 14 N9 G A 513 41.203-111.735 -34.690 1.00 45.85 N
ATOM 15 C8 G A 513 40.288-112.645 -34.246 1.00 44.74 C
ATOM 16 N7 G A 513 40.579-113.125 -33.060 1.00 44.99 N
ATOM 17 C5 G A 513 41.759-112.514 -32.695 1.00 48.44 C
ATOM 18 C6 G A 513 42.566-112.639 -31.527 1.00 54.29 C
ATOM 19 O6 G A 513 42.410-113.342 -30.514 1.00 61.26 O
ATOM 20 N1 G A 513 43.676-111.813 -31.599 1.00 47.92 N
ATOM 21 C2 G A 513 43.981-110.984 -32.647 1.00 46.90 C
ATOM 22 N2 G A 513 45.104-110.254 -32.543 1.00 49.09 N
ATOM 23 N3 G A 513 43.248-110.871 -33.731 1.00 47.14 N
ATOM 24 C4 G A 513 42.154-111.656 -33.694 1.00 49.49 C
ATOM 25 P A A 514 41.866-114.468 -39.319 1.00 47.50 P
ATOM 26 OP1 A A 514 41.806-114.652 -40.788 1.00 54.43 O
ATOM 27 OP2 A A 514 40.946-115.239 -38.456 1.00 52.23 O
ATOM 28 O5' A A 514 43.341-114.689 -38.812 1.00 37.43 O
TER
ATOM 1 O3' G B 513 41.585-112.916 -39.029 1.00 43.37 O
ATOM 2 P A B 514 41.866-114.468 -39.319 1.00 47.50 P
ATOM 3 OP1 A B 514 41.806-114.652 -40.788 1.00 54.43 O
ATOM 4 OP2 A B 514 40.946-115.239 -38.456 1.00 52.23 O
ATOM 5 O5' A B 514 43.341-114.689 -38.812 1.00 37.43 O
ATOM 6 C5' A B 514 43.770-115.977 -38.415 1.00 34.16 C
ATOM 7 C4' A B 514 45.253-116.003 -38.153 1.00 43.46 C
ATOM 8 O4' A B 514 45.963-115.558 -39.338 1.00 40.98 O
ATOM 9 C3' A B 514 45.742-115.085 -37.042 1.00 42.02 C
ATOM 10 O3' A B 514 45.657-115.687 -35.759 1.00 42.84 O
ATOM 11 C2' A B 514 47.164-114.786 -37.466 1.00 44.21 C
ATOM 12 O2' A B 514 47.996-115.883 -37.161 1.00 53.62 O
ATOM 13 C1' A B 514 47.026-114.718 -38.978 1.00 38.36 C
ATOM 14 N9 A B 514 46.723-113.354 -39.447 1.00 41.55 N
ATOM 15 C8 A B 514 45.594-112.919 -40.091 1.00 48.94 C
ATOM 16 N7 A B 514 45.601-111.641 -40.395 1.00 49.40 N
ATOM 17 C5 A B 514 46.819-111.202 -39.915 1.00 45.27 C
ATOM 18 C6 A B 514 47.419-109.943 -39.913 1.00 41.70 C
ATOM 19 N6 A B 514 46.857-108.855 -40.422 1.00 45.54 N
ATOM 20 N1 A B 514 48.623-109.825 -39.335 1.00 37.98 N
ATOM 21 C2 A B 514 49.177-110.923 -38.815 1.00 45.33 C
ATOM 22 N3 A B 514 48.724-112.178 -38.762 1.00 46.39 N
ATOM 23 C4 A B 514 47.515-112.243 -39.332 1.00 46.80 C
ATOM 24 P A B 515 44.722-115.052 -34.616 1.00 43.64 P
ATOM 25 OP1 A B 515 44.466-116.109 -33.620 1.00 52.27 O
ATOM 26 OP2 A B 515 43.561-114.418 -35.298 1.00 52.16 O
ATOM 27 O5' A B 515 45.656-113.958 -33.985 1.00 45.86 O
TER
Atoms:
OP1: (36.578,-114.303,-38.740)
OP2: (36.998,-115.153,-36.387)
C3': (41.119,-112.515,-37.758)
C1': (41.291,-111.004,-35.966)
C5': (38.611,-112.115,-38.086)
O6: (42.410,-113.342,-30.514)
O4': (40.008,-110.882,-36.532)
C8: (40.288,-112.645,-34.246)
C2: (43.981,-110.984,-32.647)
C6: (42.566,-112.639,-31.527)
C5: (41.759,-112.514,-32.695)
C4: (42.154,-111.656,-33.694)
P: (36.993,-114.040,-37.347)
C4': (39.979,-111.525,-37.831)
C2': (42.157,-111.758,-36.964)
O2': (42.816,-110.818,-37.791)
N1: (43.676,-111.813,-31.599)
N2: (45.104,-110.254,-32.543)
N3: (43.248,-110.871,-33.731)
N7: (40.579,-113.125,-33.060)
N9: (41.203,-111.735,-34.690)
O5': (38.394,-113.308,-37.330)
O3': (41.585,-112.916,-39.029)
OP2: (36.998,-115.153,-36.387)
C3': (41.119,-112.515,-37.758)
C1': (41.291,-111.004,-35.966)
C5': (38.611,-112.115,-38.086)
O6: (42.410,-113.342,-30.514)
O4': (40.008,-110.882,-36.532)
C8: (40.288,-112.645,-34.246)
C2: (43.981,-110.984,-32.647)
C6: (42.566,-112.639,-31.527)
C5: (41.759,-112.514,-32.695)
C4: (42.154,-111.656,-33.694)
P: (36.993,-114.040,-37.347)
C4': (39.979,-111.525,-37.831)
C2': (42.157,-111.758,-36.964)
O2': (42.816,-110.818,-37.791)
N1: (43.676,-111.813,-31.599)
N2: (45.104,-110.254,-32.543)
N3: (43.248,-110.871,-33.731)
N7: (40.579,-113.125,-33.060)
N9: (41.203,-111.735,-34.690)
O5': (38.394,-113.308,-37.330)
O3': (41.585,-112.916,-39.029)
OP1: (41.806,-114.652,-40.788)
OP2: (40.946,-115.239,-38.456)
C3': (45.742,-115.085,-37.042)
C1': (47.026,-114.718,-38.978)
C5': (43.770,-115.977,-38.415)
O4': (45.963,-115.558,-39.338)
C8: (45.594,-112.919,-40.091)
O2': (47.996,-115.883,-37.161)
C6: (47.419,-109.943,-39.913)
C5: (46.819,-111.202,-39.915)
C4: (47.515,-112.243,-39.332)
P: (41.866,-114.468,-39.319)
C4': (45.253,-116.003,-38.153)
C2': (47.164,-114.786,-37.466)
C2: (49.177,-110.923,-38.815)
N1: (48.623,-109.825,-39.335)
N3: (48.724,-112.178,-38.762)
N6: (46.857,-108.855,-40.422)
N7: (45.601,-111.641,-40.395)
N9: (46.723,-113.354,-39.447)
O5': (43.341,-114.689,-38.812)
O3': (45.657,-115.687,-35.759)
OP2: (40.946,-115.239,-38.456)
C3': (45.742,-115.085,-37.042)
C1': (47.026,-114.718,-38.978)
C5': (43.770,-115.977,-38.415)
O4': (45.963,-115.558,-39.338)
C8: (45.594,-112.919,-40.091)
O2': (47.996,-115.883,-37.161)
C6: (47.419,-109.943,-39.913)
C5: (46.819,-111.202,-39.915)
C4: (47.515,-112.243,-39.332)
P: (41.866,-114.468,-39.319)
C4': (45.253,-116.003,-38.153)
C2': (47.164,-114.786,-37.466)
C2: (49.177,-110.923,-38.815)
N1: (48.623,-109.825,-39.335)
N3: (48.724,-112.178,-38.762)
N6: (46.857,-108.855,-40.422)
N7: (45.601,-111.641,-40.395)
N9: (46.723,-113.354,-39.447)
O5': (43.341,-114.689,-38.812)
O3': (45.657,-115.687,-35.759)
Image (generated by PyMOL):