Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1348:A1349
Extra
PDB:
ATOM 1 O3' U A1347 45.987 187.691 75.235 1.00 54.18 O
ATOM 2 P G A1348 44.396 187.811 75.331 1.00 52.29 P
ATOM 3 OP1 G A1348 44.013 188.301 73.995 1.00 51.84 O
ATOM 4 OP2 G A1348 44.073 188.611 76.544 1.00 51.97 O
ATOM 5 O5' G A1348 43.869 186.320 75.531 1.00 53.05 O
ATOM 6 C5' G A1348 44.167 185.283 74.575 1.00 54.48 C
ATOM 7 C4' G A1348 44.053 183.928 75.236 1.00 54.68 C
ATOM 8 O4' G A1348 45.034 183.815 76.302 1.00 54.71 O
ATOM 9 C3' G A1348 42.729 183.691 75.936 1.00 55.09 C
ATOM 10 O3' G A1348 41.775 183.229 74.995 1.00 54.60 O
ATOM 11 C2' G A1348 43.085 182.616 76.950 1.00 55.34 C
ATOM 12 O2' G A1348 43.151 181.359 76.314 1.00 56.23 O
ATOM 13 C1' G A1348 44.495 183.052 77.368 1.00 56.17 C
ATOM 14 N9 G A1348 44.478 183.887 78.564 1.00 57.52 N
ATOM 15 C8 G A1348 44.394 185.255 78.611 1.00 56.99 C
ATOM 16 N7 G A1348 44.290 185.720 79.824 1.00 57.90 N
ATOM 17 C5 G A1348 44.329 184.594 80.629 1.00 58.53 C
ATOM 18 C6 G A1348 44.222 184.472 82.039 1.00 59.28 C
ATOM 19 O6 G A1348 44.018 185.360 82.876 1.00 59.08 O
ATOM 20 N1 G A1348 44.352 183.146 82.450 1.00 59.90 N
ATOM 21 C2 G A1348 44.534 182.073 81.610 1.00 59.12 C
ATOM 22 N2 G A1348 44.666 180.881 82.197 1.00 56.61 N
ATOM 23 N3 G A1348 44.590 182.171 80.288 1.00 59.01 N
ATOM 24 C4 G A1348 44.484 183.455 79.870 1.00 58.71 C
ATOM 25 P A A1349 40.249 183.673 75.134 1.00 55.33 P
ATOM 26 OP1 A A1349 39.479 183.145 73.978 1.00 55.30 O
ATOM 27 OP2 A A1349 40.268 185.117 75.410 1.00 56.10 O
ATOM 28 O5' A A1349 39.737 182.956 76.449 1.00 53.84 O
TER
ATOM 1 O3' G B1348 41.775 183.229 74.995 1.00 54.60 O
ATOM 2 P A B1349 40.249 183.673 75.134 1.00 55.33 P
ATOM 3 OP1 A B1349 39.479 183.145 73.978 1.00 55.30 O
ATOM 4 OP2 A B1349 40.268 185.117 75.410 1.00 56.10 O
ATOM 5 O5' A B1349 39.737 182.956 76.449 1.00 53.84 O
ATOM 6 C5' A B1349 38.486 183.324 77.019 1.00 52.79 C
ATOM 7 C4' A B1349 37.927 182.174 77.811 1.00 53.70 C
ATOM 8 O4' A B1349 37.622 181.056 76.945 1.00 53.13 O
ATOM 9 C3' A B1349 38.893 181.589 78.816 1.00 53.09 C
ATOM 10 O3' A B1349 38.902 182.378 79.978 1.00 53.51 O
ATOM 11 C2' A B1349 38.301 180.218 79.059 1.00 52.55 C
ATOM 12 O2' A B1349 37.173 180.309 79.911 1.00 51.82 O
ATOM 13 C1' A B1349 37.867 179.849 77.640 1.00 52.65 C
ATOM 14 N9 A B1349 38.880 179.107 76.893 1.00 52.31 N
ATOM 15 C8 A B1349 39.662 179.530 75.848 1.00 51.76 C
ATOM 16 N7 A B1349 40.421 178.589 75.343 1.00 51.15 N
ATOM 17 C5 A B1349 40.132 177.478 76.118 1.00 50.43 C
ATOM 18 C6 A B1349 40.586 176.146 76.076 1.00 49.69 C
ATOM 19 N6 A B1349 41.448 175.683 75.173 1.00 47.30 N
ATOM 20 N1 A B1349 40.104 175.292 77.001 1.00 50.45 N
ATOM 21 C2 A B1349 39.220 175.753 77.896 1.00 51.44 C
ATOM 22 N3 A B1349 38.707 176.971 78.027 1.00 51.30 N
ATOM 23 C4 A B1349 39.207 177.793 77.095 1.00 51.67 C
ATOM 24 P G B1350 40.270 182.585 80.763 1.00 53.24 P
ATOM 25 OP1 G B1350 39.946 183.454 81.909 1.00 54.21 O
ATOM 26 OP2 G B1350 41.287 183.022 79.756 1.00 50.83 O
ATOM 27 O5' G B1350 40.616 181.120 81.282 1.00 52.34 O
TER
ATOM 2 P G A1348 44.396 187.811 75.331 1.00 52.29 P
ATOM 3 OP1 G A1348 44.013 188.301 73.995 1.00 51.84 O
ATOM 4 OP2 G A1348 44.073 188.611 76.544 1.00 51.97 O
ATOM 5 O5' G A1348 43.869 186.320 75.531 1.00 53.05 O
ATOM 6 C5' G A1348 44.167 185.283 74.575 1.00 54.48 C
ATOM 7 C4' G A1348 44.053 183.928 75.236 1.00 54.68 C
ATOM 8 O4' G A1348 45.034 183.815 76.302 1.00 54.71 O
ATOM 9 C3' G A1348 42.729 183.691 75.936 1.00 55.09 C
ATOM 10 O3' G A1348 41.775 183.229 74.995 1.00 54.60 O
ATOM 11 C2' G A1348 43.085 182.616 76.950 1.00 55.34 C
ATOM 12 O2' G A1348 43.151 181.359 76.314 1.00 56.23 O
ATOM 13 C1' G A1348 44.495 183.052 77.368 1.00 56.17 C
ATOM 14 N9 G A1348 44.478 183.887 78.564 1.00 57.52 N
ATOM 15 C8 G A1348 44.394 185.255 78.611 1.00 56.99 C
ATOM 16 N7 G A1348 44.290 185.720 79.824 1.00 57.90 N
ATOM 17 C5 G A1348 44.329 184.594 80.629 1.00 58.53 C
ATOM 18 C6 G A1348 44.222 184.472 82.039 1.00 59.28 C
ATOM 19 O6 G A1348 44.018 185.360 82.876 1.00 59.08 O
ATOM 20 N1 G A1348 44.352 183.146 82.450 1.00 59.90 N
ATOM 21 C2 G A1348 44.534 182.073 81.610 1.00 59.12 C
ATOM 22 N2 G A1348 44.666 180.881 82.197 1.00 56.61 N
ATOM 23 N3 G A1348 44.590 182.171 80.288 1.00 59.01 N
ATOM 24 C4 G A1348 44.484 183.455 79.870 1.00 58.71 C
ATOM 25 P A A1349 40.249 183.673 75.134 1.00 55.33 P
ATOM 26 OP1 A A1349 39.479 183.145 73.978 1.00 55.30 O
ATOM 27 OP2 A A1349 40.268 185.117 75.410 1.00 56.10 O
ATOM 28 O5' A A1349 39.737 182.956 76.449 1.00 53.84 O
TER
ATOM 1 O3' G B1348 41.775 183.229 74.995 1.00 54.60 O
ATOM 2 P A B1349 40.249 183.673 75.134 1.00 55.33 P
ATOM 3 OP1 A B1349 39.479 183.145 73.978 1.00 55.30 O
ATOM 4 OP2 A B1349 40.268 185.117 75.410 1.00 56.10 O
ATOM 5 O5' A B1349 39.737 182.956 76.449 1.00 53.84 O
ATOM 6 C5' A B1349 38.486 183.324 77.019 1.00 52.79 C
ATOM 7 C4' A B1349 37.927 182.174 77.811 1.00 53.70 C
ATOM 8 O4' A B1349 37.622 181.056 76.945 1.00 53.13 O
ATOM 9 C3' A B1349 38.893 181.589 78.816 1.00 53.09 C
ATOM 10 O3' A B1349 38.902 182.378 79.978 1.00 53.51 O
ATOM 11 C2' A B1349 38.301 180.218 79.059 1.00 52.55 C
ATOM 12 O2' A B1349 37.173 180.309 79.911 1.00 51.82 O
ATOM 13 C1' A B1349 37.867 179.849 77.640 1.00 52.65 C
ATOM 14 N9 A B1349 38.880 179.107 76.893 1.00 52.31 N
ATOM 15 C8 A B1349 39.662 179.530 75.848 1.00 51.76 C
ATOM 16 N7 A B1349 40.421 178.589 75.343 1.00 51.15 N
ATOM 17 C5 A B1349 40.132 177.478 76.118 1.00 50.43 C
ATOM 18 C6 A B1349 40.586 176.146 76.076 1.00 49.69 C
ATOM 19 N6 A B1349 41.448 175.683 75.173 1.00 47.30 N
ATOM 20 N1 A B1349 40.104 175.292 77.001 1.00 50.45 N
ATOM 21 C2 A B1349 39.220 175.753 77.896 1.00 51.44 C
ATOM 22 N3 A B1349 38.707 176.971 78.027 1.00 51.30 N
ATOM 23 C4 A B1349 39.207 177.793 77.095 1.00 51.67 C
ATOM 24 P G B1350 40.270 182.585 80.763 1.00 53.24 P
ATOM 25 OP1 G B1350 39.946 183.454 81.909 1.00 54.21 O
ATOM 26 OP2 G B1350 41.287 183.022 79.756 1.00 50.83 O
ATOM 27 O5' G B1350 40.616 181.120 81.282 1.00 52.34 O
TER
Atoms:
OP1: (44.013,188.301,73.995)
OP2: (44.073,188.611,76.544)
C3': (42.729,183.691,75.936)
C1': (44.495,183.052,77.368)
C5': (44.167,185.283,74.575)
O6: (44.018,185.360,82.876)
O4': (45.034,183.815,76.302)
C8: (44.394,185.255,78.611)
C2: (44.534,182.073,81.610)
C6: (44.222,184.472,82.039)
C5: (44.329,184.594,80.629)
C4: (44.484,183.455,79.870)
P: (44.396,187.811,75.331)
C4': (44.053,183.928,75.236)
C2': (43.085,182.616,76.950)
O2': (43.151,181.359,76.314)
N1: (44.352,183.146,82.450)
N2: (44.666,180.881,82.197)
N3: (44.590,182.171,80.288)
N7: (44.290,185.720,79.824)
N9: (44.478,183.887,78.564)
O5': (43.869,186.320,75.531)
O3': (41.775,183.229,74.995)
OP2: (44.073,188.611,76.544)
C3': (42.729,183.691,75.936)
C1': (44.495,183.052,77.368)
C5': (44.167,185.283,74.575)
O6: (44.018,185.360,82.876)
O4': (45.034,183.815,76.302)
C8: (44.394,185.255,78.611)
C2: (44.534,182.073,81.610)
C6: (44.222,184.472,82.039)
C5: (44.329,184.594,80.629)
C4: (44.484,183.455,79.870)
P: (44.396,187.811,75.331)
C4': (44.053,183.928,75.236)
C2': (43.085,182.616,76.950)
O2': (43.151,181.359,76.314)
N1: (44.352,183.146,82.450)
N2: (44.666,180.881,82.197)
N3: (44.590,182.171,80.288)
N7: (44.290,185.720,79.824)
N9: (44.478,183.887,78.564)
O5': (43.869,186.320,75.531)
O3': (41.775,183.229,74.995)
OP1: (39.479,183.145,73.978)
OP2: (40.268,185.117,75.410)
C3': (38.893,181.589,78.816)
C1': (37.867,179.849,77.640)
C5': (38.486,183.324,77.019)
O4': (37.622,181.056,76.945)
C8: (39.662,179.530,75.848)
O2': (37.173,180.309,79.911)
C6: (40.586,176.146,76.076)
C5: (40.132,177.478,76.118)
C4: (39.207,177.793,77.095)
P: (40.249,183.673,75.134)
C4': (37.927,182.174,77.811)
C2': (38.301,180.218,79.059)
C2: (39.220,175.753,77.896)
N1: (40.104,175.292,77.001)
N3: (38.707,176.971,78.027)
N6: (41.448,175.683,75.173)
N7: (40.421,178.589,75.343)
N9: (38.880,179.107,76.893)
O5': (39.737,182.956,76.449)
O3': (38.902,182.378,79.978)
OP2: (40.268,185.117,75.410)
C3': (38.893,181.589,78.816)
C1': (37.867,179.849,77.640)
C5': (38.486,183.324,77.019)
O4': (37.622,181.056,76.945)
C8: (39.662,179.530,75.848)
O2': (37.173,180.309,79.911)
C6: (40.586,176.146,76.076)
C5: (40.132,177.478,76.118)
C4: (39.207,177.793,77.095)
P: (40.249,183.673,75.134)
C4': (37.927,182.174,77.811)
C2': (38.301,180.218,79.059)
C2: (39.220,175.753,77.896)
N1: (40.104,175.292,77.001)
N3: (38.707,176.971,78.027)
N6: (41.448,175.683,75.173)
N7: (40.421,178.589,75.343)
N9: (38.880,179.107,76.893)
O5': (39.737,182.956,76.449)
O3': (38.902,182.378,79.978)
Image (generated by PyMOL):