Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0302:0303
Extra
PDB:
ATOM 1 O3' U A 301 1.030 145.121 52.827 1.00 57.55 O
ATOM 2 P G A 302 1.488 146.652 52.974 1.00 57.35 P
ATOM 3 OP1 G A 302 1.469 146.998 54.410 1.00 57.05 O
ATOM 4 OP2 G A 302 0.714 147.475 52.013 1.00 58.24 O
ATOM 5 O5' G A 302 3.002 146.642 52.487 1.00 57.71 O
ATOM 6 C5' G A 302 4.013 145.967 53.251 1.00 54.63 C
ATOM 7 C4' G A 302 5.337 145.999 52.525 1.00 52.49 C
ATOM 8 O4' G A 302 5.245 145.251 51.283 1.00 51.65 O
ATOM 9 C3' G A 302 5.829 147.363 52.076 1.00 51.08 C
ATOM 10 O3' G A 302 6.413 148.103 53.134 1.00 50.27 O
ATOM 11 C2' G A 302 6.843 146.983 51.009 1.00 51.48 C
ATOM 12 O2' G A 302 8.066 146.528 51.542 1.00 52.65 O
ATOM 13 C1' G A 302 6.128 145.817 50.326 1.00 52.04 C
ATOM 14 N9 G A 302 5.350 146.302 49.190 1.00 53.01 N
ATOM 15 C8 G A 302 4.096 146.860 49.215 1.00 52.91 C
ATOM 16 N7 G A 302 3.697 147.273 48.045 1.00 54.13 N
ATOM 17 C5 G A 302 4.742 146.951 47.192 1.00 54.55 C
ATOM 18 C6 G A 302 4.888 147.164 45.800 1.00 55.41 C
ATOM 19 O6 G A 302 4.103 147.709 45.016 1.00 58.13 O
ATOM 20 N1 G A 302 6.103 146.674 45.334 1.00 55.35 N
ATOM 21 C2 G A 302 7.059 146.066 46.106 1.00 53.90 C
ATOM 22 N2 G A 302 8.165 145.659 45.468 1.00 52.22 N
ATOM 23 N3 G A 302 6.939 145.870 47.405 1.00 53.91 N
ATOM 24 C4 G A 302 5.762 146.334 47.879 1.00 53.62 C
ATOM 25 P G A 303 6.230 149.697 53.183 1.00 51.08 P
ATOM 26 OP1 G A 303 7.039 150.228 54.306 1.00 50.94 O
ATOM 27 OP2 G A 303 4.776 149.983 53.133 1.00 51.54 O
ATOM 28 O5' G A 303 6.885 150.198 51.822 1.00 49.77 O
TER
ATOM 1 O3' G B 302 6.413 148.103 53.134 1.00 50.27 O
ATOM 2 P G B 303 6.230 149.697 53.183 1.00 51.08 P
ATOM 3 OP1 G B 303 7.039 150.228 54.306 1.00 50.94 O
ATOM 4 OP2 G B 303 4.776 149.983 53.133 1.00 51.54 O
ATOM 5 O5' G B 303 6.885 150.198 51.822 1.00 49.77 O
ATOM 6 C5' G B 303 6.934 151.598 51.501 1.00 50.31 C
ATOM 7 C4' G B 303 8.225 151.925 50.791 1.00 51.95 C
ATOM 8 O4' G B 303 9.341 151.767 51.703 1.00 53.04 O
ATOM 9 C3' G B 303 8.570 151.023 49.618 1.00 53.24 C
ATOM 10 O3' G B 303 7.901 151.457 48.442 1.00 54.46 O
ATOM 11 C2' G B 303 10.081 151.187 49.516 1.00 52.62 C
ATOM 12 O2' G B 303 10.462 152.398 48.897 1.00 53.03 O
ATOM 13 C1' G B 303 10.468 151.283 50.992 1.00 52.33 C
ATOM 14 N9 G B 303 10.898 150.024 51.592 1.00 51.85 N
ATOM 15 C8 G B 303 10.313 149.357 52.642 1.00 52.51 C
ATOM 16 N7 G B 303 10.975 148.294 53.005 1.00 53.30 N
ATOM 17 C5 G B 303 12.054 148.246 52.133 1.00 53.30 C
ATOM 18 C6 G B 303 13.128 147.329 52.054 1.00 54.44 C
ATOM 19 O6 G B 303 13.361 146.347 52.775 1.00 56.72 O
ATOM 20 N1 G B 303 13.994 147.646 51.012 1.00 53.21 N
ATOM 21 C2 G B 303 13.852 148.717 50.165 1.00 51.67 C
ATOM 22 N2 G B 303 14.793 148.860 49.217 1.00 50.75 N
ATOM 23 N3 G B 303 12.863 149.585 50.240 1.00 51.33 N
ATOM 24 C4 G B 303 12.007 149.292 51.240 1.00 52.03 C
ATOM 25 P A B 304 6.904 150.463 47.677 1.00 54.78 P
ATOM 26 OP1 A B 304 5.922 151.314 46.965 1.00 56.51 O
ATOM 27 OP2 A B 304 6.423 149.447 48.652 1.00 56.40 O
ATOM 28 O5' A B 304 7.822 149.740 46.597 1.00 51.45 O
TER
ATOM 2 P G A 302 1.488 146.652 52.974 1.00 57.35 P
ATOM 3 OP1 G A 302 1.469 146.998 54.410 1.00 57.05 O
ATOM 4 OP2 G A 302 0.714 147.475 52.013 1.00 58.24 O
ATOM 5 O5' G A 302 3.002 146.642 52.487 1.00 57.71 O
ATOM 6 C5' G A 302 4.013 145.967 53.251 1.00 54.63 C
ATOM 7 C4' G A 302 5.337 145.999 52.525 1.00 52.49 C
ATOM 8 O4' G A 302 5.245 145.251 51.283 1.00 51.65 O
ATOM 9 C3' G A 302 5.829 147.363 52.076 1.00 51.08 C
ATOM 10 O3' G A 302 6.413 148.103 53.134 1.00 50.27 O
ATOM 11 C2' G A 302 6.843 146.983 51.009 1.00 51.48 C
ATOM 12 O2' G A 302 8.066 146.528 51.542 1.00 52.65 O
ATOM 13 C1' G A 302 6.128 145.817 50.326 1.00 52.04 C
ATOM 14 N9 G A 302 5.350 146.302 49.190 1.00 53.01 N
ATOM 15 C8 G A 302 4.096 146.860 49.215 1.00 52.91 C
ATOM 16 N7 G A 302 3.697 147.273 48.045 1.00 54.13 N
ATOM 17 C5 G A 302 4.742 146.951 47.192 1.00 54.55 C
ATOM 18 C6 G A 302 4.888 147.164 45.800 1.00 55.41 C
ATOM 19 O6 G A 302 4.103 147.709 45.016 1.00 58.13 O
ATOM 20 N1 G A 302 6.103 146.674 45.334 1.00 55.35 N
ATOM 21 C2 G A 302 7.059 146.066 46.106 1.00 53.90 C
ATOM 22 N2 G A 302 8.165 145.659 45.468 1.00 52.22 N
ATOM 23 N3 G A 302 6.939 145.870 47.405 1.00 53.91 N
ATOM 24 C4 G A 302 5.762 146.334 47.879 1.00 53.62 C
ATOM 25 P G A 303 6.230 149.697 53.183 1.00 51.08 P
ATOM 26 OP1 G A 303 7.039 150.228 54.306 1.00 50.94 O
ATOM 27 OP2 G A 303 4.776 149.983 53.133 1.00 51.54 O
ATOM 28 O5' G A 303 6.885 150.198 51.822 1.00 49.77 O
TER
ATOM 1 O3' G B 302 6.413 148.103 53.134 1.00 50.27 O
ATOM 2 P G B 303 6.230 149.697 53.183 1.00 51.08 P
ATOM 3 OP1 G B 303 7.039 150.228 54.306 1.00 50.94 O
ATOM 4 OP2 G B 303 4.776 149.983 53.133 1.00 51.54 O
ATOM 5 O5' G B 303 6.885 150.198 51.822 1.00 49.77 O
ATOM 6 C5' G B 303 6.934 151.598 51.501 1.00 50.31 C
ATOM 7 C4' G B 303 8.225 151.925 50.791 1.00 51.95 C
ATOM 8 O4' G B 303 9.341 151.767 51.703 1.00 53.04 O
ATOM 9 C3' G B 303 8.570 151.023 49.618 1.00 53.24 C
ATOM 10 O3' G B 303 7.901 151.457 48.442 1.00 54.46 O
ATOM 11 C2' G B 303 10.081 151.187 49.516 1.00 52.62 C
ATOM 12 O2' G B 303 10.462 152.398 48.897 1.00 53.03 O
ATOM 13 C1' G B 303 10.468 151.283 50.992 1.00 52.33 C
ATOM 14 N9 G B 303 10.898 150.024 51.592 1.00 51.85 N
ATOM 15 C8 G B 303 10.313 149.357 52.642 1.00 52.51 C
ATOM 16 N7 G B 303 10.975 148.294 53.005 1.00 53.30 N
ATOM 17 C5 G B 303 12.054 148.246 52.133 1.00 53.30 C
ATOM 18 C6 G B 303 13.128 147.329 52.054 1.00 54.44 C
ATOM 19 O6 G B 303 13.361 146.347 52.775 1.00 56.72 O
ATOM 20 N1 G B 303 13.994 147.646 51.012 1.00 53.21 N
ATOM 21 C2 G B 303 13.852 148.717 50.165 1.00 51.67 C
ATOM 22 N2 G B 303 14.793 148.860 49.217 1.00 50.75 N
ATOM 23 N3 G B 303 12.863 149.585 50.240 1.00 51.33 N
ATOM 24 C4 G B 303 12.007 149.292 51.240 1.00 52.03 C
ATOM 25 P A B 304 6.904 150.463 47.677 1.00 54.78 P
ATOM 26 OP1 A B 304 5.922 151.314 46.965 1.00 56.51 O
ATOM 27 OP2 A B 304 6.423 149.447 48.652 1.00 56.40 O
ATOM 28 O5' A B 304 7.822 149.740 46.597 1.00 51.45 O
TER
Atoms:
OP1: (1.469,146.998,54.410)
OP2: (0.714,147.475,52.013)
C3': (5.829,147.363,52.076)
C1': (6.128,145.817,50.326)
C5': (4.013,145.967,53.251)
O6: (4.103,147.709,45.016)
O4': (5.245,145.251,51.283)
C8: (4.096,146.860,49.215)
C2: (7.059,146.066,46.106)
C6: (4.888,147.164,45.800)
C5: (4.742,146.951,47.192)
C4: (5.762,146.334,47.879)
P: (1.488,146.652,52.974)
C4': (5.337,145.999,52.525)
C2': (6.843,146.983,51.009)
O2': (8.066,146.528,51.542)
N1: (6.103,146.674,45.334)
N2: (8.165,145.659,45.468)
N3: (6.939,145.870,47.405)
N7: (3.697,147.273,48.045)
N9: (5.350,146.302,49.190)
O5': (3.002,146.642,52.487)
O3': (6.413,148.103,53.134)
OP2: (0.714,147.475,52.013)
C3': (5.829,147.363,52.076)
C1': (6.128,145.817,50.326)
C5': (4.013,145.967,53.251)
O6: (4.103,147.709,45.016)
O4': (5.245,145.251,51.283)
C8: (4.096,146.860,49.215)
C2: (7.059,146.066,46.106)
C6: (4.888,147.164,45.800)
C5: (4.742,146.951,47.192)
C4: (5.762,146.334,47.879)
P: (1.488,146.652,52.974)
C4': (5.337,145.999,52.525)
C2': (6.843,146.983,51.009)
O2': (8.066,146.528,51.542)
N1: (6.103,146.674,45.334)
N2: (8.165,145.659,45.468)
N3: (6.939,145.870,47.405)
N7: (3.697,147.273,48.045)
N9: (5.350,146.302,49.190)
O5': (3.002,146.642,52.487)
O3': (6.413,148.103,53.134)
OP1: (7.039,150.228,54.306)
OP2: (4.776,149.983,53.133)
C3': (8.570,151.023,49.618)
C1': (10.468,151.283,50.992)
C5': (6.934,151.598,51.501)
O6: (13.361,146.347,52.775)
O4': (9.341,151.767,51.703)
C8: (10.313,149.357,52.642)
C2: (13.852,148.717,50.165)
C6: (13.128,147.329,52.054)
C5: (12.054,148.246,52.133)
C4: (12.007,149.292,51.240)
P: (6.230,149.697,53.183)
C4': (8.225,151.925,50.791)
C2': (10.081,151.187,49.516)
O2': (10.462,152.398,48.897)
N1: (13.994,147.646,51.012)
N2: (14.793,148.860,49.217)
N3: (12.863,149.585,50.240)
N7: (10.975,148.294,53.005)
N9: (10.898,150.024,51.592)
O5': (6.885,150.198,51.822)
O3': (7.901,151.457,48.442)
OP2: (4.776,149.983,53.133)
C3': (8.570,151.023,49.618)
C1': (10.468,151.283,50.992)
C5': (6.934,151.598,51.501)
O6: (13.361,146.347,52.775)
O4': (9.341,151.767,51.703)
C8: (10.313,149.357,52.642)
C2: (13.852,148.717,50.165)
C6: (13.128,147.329,52.054)
C5: (12.054,148.246,52.133)
C4: (12.007,149.292,51.240)
P: (6.230,149.697,53.183)
C4': (8.225,151.925,50.791)
C2': (10.081,151.187,49.516)
O2': (10.462,152.398,48.897)
N1: (13.994,147.646,51.012)
N2: (14.793,148.860,49.217)
N3: (12.863,149.585,50.240)
N7: (10.975,148.294,53.005)
N9: (10.898,150.024,51.592)
O5': (6.885,150.198,51.822)
O3': (7.901,151.457,48.442)
Image (generated by PyMOL):