ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3P22:E17:E18

Extra

PDB:
ATOM 1 O3' C A 16 10.387 -23.863 32.135 1.00 46.77 O
ATOM 2 P G A 17 8.809 -23.681 32.428 1.00 47.18 P
ATOM 3 OP1 G A 17 8.615 -24.028 33.849 1.00 51.06 O
ATOM 4 OP2 G A 17 8.008 -24.349 31.388 1.00 45.60 O
ATOM 5 O5' G A 17 8.549 -22.123 32.243 1.00 45.76 O
ATOM 6 C5' G A 17 8.938 -21.226 33.252 1.00 45.17 C
ATOM 7 C4' G A 17 8.682 -19.813 32.785 1.00 44.63 C
ATOM 8 O4' G A 17 9.378 -19.566 31.548 1.00 45.72 O
ATOM 9 C3' G A 17 7.260 -19.491 32.395 1.00 44.42 C
ATOM 10 O3' G A 17 6.475 -19.390 33.573 1.00 43.49 O
ATOM 11 C2' G A 17 7.534 -18.147 31.708 1.00 43.78 C
ATOM 12 O2' G A 17 7.874 -17.104 32.603 1.00 44.46 O
ATOM 13 C1' G A 17 8.748 -18.505 30.868 1.00 42.89 C
ATOM 14 N9 G A 17 8.288 -18.999 29.594 1.00 41.98 N
ATOM 15 C8 G A 17 8.047 -20.298 29.233 1.00 41.89 C
ATOM 16 N7 G A 17 7.590 -20.418 28.019 1.00 41.66 N
ATOM 17 C5 G A 17 7.509 -19.115 27.547 1.00 42.25 C
ATOM 18 C6 G A 17 7.070 -18.620 26.284 1.00 42.48 C
ATOM 19 O6 G A 17 6.653 -19.310 25.312 1.00 43.95 O
ATOM 20 N1 G A 17 7.146 -17.197 26.240 1.00 40.62 N
ATOM 21 C2 G A 17 7.598 -16.387 27.290 1.00 39.95 C
ATOM 22 N2 G A 17 7.625 -15.049 27.120 1.00 37.37 N
ATOM 23 N3 G A 17 8.008 -16.870 28.461 1.00 40.83 N
ATOM 24 C4 G A 17 7.936 -18.226 28.517 1.00 41.86 C
ATOM 25 P A A 18 4.968 -19.894 33.622 1.00 43.04 P
ATOM 26 OP1 A A 18 4.494 -19.711 35.007 1.00 46.58 O
ATOM 27 OP2 A A 18 4.816 -21.211 32.974 1.00 43.44 O
ATOM 28 O5' A A 18 4.242 -18.806 32.710 1.00 44.27 O
TER

ATOM 1 O3' G B 17 6.475 -19.390 33.573 1.00 43.49 O
ATOM 2 P A B 18 4.968 -19.894 33.622 1.00 43.04 P
ATOM 3 OP1 A B 18 4.494 -19.711 35.007 1.00 46.58 O
ATOM 4 OP2 A B 18 4.816 -21.211 32.974 1.00 43.44 O
ATOM 5 O5' A B 18 4.242 -18.806 32.710 1.00 44.27 O
ATOM 6 C5' A B 18 2.853 -18.928 32.409 1.00 44.93 C
ATOM 7 C4' A B 18 2.257 -17.555 32.239 1.00 45.31 C
ATOM 8 O4' A B 18 2.306 -16.886 33.515 1.00 45.14 O
ATOM 9 C3' A B 18 3.019 -16.634 31.292 1.00 45.02 C
ATOM 10 O3' A B 18 2.618 -16.976 29.993 1.00 45.96 O
ATOM 11 C2' A B 18 2.506 -15.274 31.781 1.00 45.62 C
ATOM 12 O2' A B 18 1.154 -14.974 31.457 1.00 46.47 O
ATOM 13 C1' A B 18 2.502 -15.511 33.289 1.00 45.62 C
ATOM 14 N9 A B 18 3.703 -15.158 34.006 1.00 44.22 N
ATOM 15 C8 A B 18 4.598 -16.025 34.554 1.00 44.26 C
ATOM 16 N7 A B 18 5.582 -15.426 35.184 1.00 44.27 N
ATOM 17 C5 A B 18 5.306 -14.081 35.026 1.00 45.07 C
ATOM 18 C6 A B 18 5.975 -12.924 35.462 1.00 46.14 C
ATOM 19 N6 A B 18 7.106 -12.989 36.170 1.00 46.39 N
ATOM 20 N1 A B 18 5.434 -11.710 35.158 1.00 47.35 N
ATOM 21 C2 A B 18 4.293 -11.684 34.451 1.00 46.70 C
ATOM 22 N3 A B 18 3.581 -12.713 33.976 1.00 45.89 N
ATOM 23 C4 A B 18 4.145 -13.892 34.306 1.00 44.80 C
ATOM 24 P A B 19 3.547 -16.894 28.707 1.00 44.54 P
ATOM 25 OP1 A B 19 2.958 -17.813 27.687 1.00 45.37 O
ATOM 26 OP2 A B 19 4.969 -17.031 29.080 1.00 44.76 O
ATOM 27 O5' A B 19 3.253 -15.393 28.285 1.00 44.95 O
TER

Atoms:
OP1: (8.615,-24.028,33.849)
OP2: (8.008,-24.349,31.388)
C3': (7.260,-19.491,32.395)
C1': (8.748,-18.505,30.868)
C5': (8.938,-21.226,33.252)
O6: (6.653,-19.310,25.312)
O4': (9.378,-19.566,31.548)
C8: (8.047,-20.298,29.233)
C2: (7.598,-16.387,27.290)
C6: (7.070,-18.620,26.284)
C5: (7.509,-19.115,27.547)
C4: (7.936,-18.226,28.517)
P: (8.809,-23.681,32.428)
C4': (8.682,-19.813,32.785)
C2': (7.534,-18.147,31.708)
O2': (7.874,-17.104,32.603)
N1: (7.146,-17.197,26.240)
N2: (7.625,-15.049,27.120)
N3: (8.008,-16.870,28.461)
N7: (7.590,-20.418,28.019)
N9: (8.288,-18.999,29.594)
O5': (8.549,-22.123,32.243)
O3': (6.475,-19.390,33.573)
OP1: (4.494,-19.711,35.007)
OP2: (4.816,-21.211,32.974)
C3': (3.019,-16.634,31.292)
C1': (2.502,-15.511,33.289)
C5': (2.853,-18.928,32.409)
O4': (2.306,-16.886,33.515)
C8: (4.598,-16.025,34.554)
O2': (1.154,-14.974,31.457)
C6: (5.975,-12.924,35.462)
C5: (5.306,-14.081,35.026)
C4: (4.145,-13.892,34.306)
P: (4.968,-19.894,33.622)
C4': (2.257,-17.555,32.239)
C2': (2.506,-15.274,31.781)
C2: (4.293,-11.684,34.451)
N1: (5.434,-11.710,35.158)
N3: (3.581,-12.713,33.976)
N6: (7.106,-12.989,36.170)
N7: (5.582,-15.426,35.184)
N9: (3.703,-15.158,34.006)
O5': (4.242,-18.806,32.710)
O3': (2.618,-16.976,29.993)
Image (generated by PyMOL):
PyMOL image
show in jmol