ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8N:A360:A361

Extra

PDB:
ATOM 1 O3' G A 359 -76.875 -5.138 -55.399 1.00 14.95 O
ATOM 2 P G A 360 -78.444 -4.930 -55.436 1.00 14.80 P
ATOM 3 OP1 G A 360 -78.960 -5.306 -54.108 1.00 14.80 O
ATOM 4 OP2 G A 360 -78.944 -5.647 -56.640 1.00 14.80 O
ATOM 5 O5' G A 360 -78.565 -3.362 -55.643 1.00 14.80 O
ATOM 6 C5' G A 360 -77.633 -2.485 -55.025 1.00 14.80 C
ATOM 7 C4' G A 360 -77.546 -1.167 -55.743 1.00 14.80 C
ATOM 8 O4' G A 360 -76.780 -1.324 -56.963 1.00 14.80 O
ATOM 9 C3' G A 360 -78.856 -0.574 -56.226 1.00 14.80 C
ATOM 10 O3' G A 360 -79.610 0.056 -55.214 1.00 14.80 O
ATOM 11 C2' G A 360 -78.387 0.378 -57.290 1.00 14.80 C
ATOM 12 O2' G A 360 -77.820 1.534 -56.697 1.00 14.80 O
ATOM 13 C1' G A 360 -77.284 -0.451 -57.944 1.00 14.80 C
ATOM 14 N9 G A 360 -77.842 -1.249 -59.019 1.00 15.12 N
ATOM 15 C8 G A 360 -78.503 -2.429 -58.835 1.00 15.12 C
ATOM 16 N7 G A 360 -78.982 -2.911 -59.947 1.00 15.12 N
ATOM 17 C5 G A 360 -78.638 -1.953 -60.883 1.00 15.12 C
ATOM 18 C6 G A 360 -78.913 -1.930 -62.245 1.00 15.12 C
ATOM 19 O6 G A 360 -79.515 -2.790 -62.882 1.00 15.12 O
ATOM 20 N1 G A 360 -78.407 -0.799 -62.861 1.00 15.12 N
ATOM 21 C2 G A 360 -77.725 0.198 -62.228 1.00 15.12 C
ATOM 22 N2 G A 360 -77.327 1.199 -63.035 1.00 15.12 N
ATOM 23 N3 G A 360 -77.473 0.201 -60.934 1.00 15.12 N
ATOM 24 C4 G A 360 -77.950 -0.905 -60.337 1.00 15.12 C
ATOM 25 P A A 361 -81.206 0.010 -55.310 1.00 11.51 P
ATOM 26 OP1 A A 361 -81.742 0.197 -53.936 1.00 11.51 O
ATOM 27 OP2 A A 361 -81.537 -1.233 -56.036 1.00 11.51 O
ATOM 28 O5' A A 361 -81.569 1.273 -56.228 1.00 11.50 O
TER

ATOM 1 O3' G B 360 -79.610 0.056 -55.214 1.00 14.80 O
ATOM 2 P A B 361 -81.206 0.010 -55.310 1.00 11.51 P
ATOM 3 OP1 A B 361 -81.742 0.197 -53.936 1.00 11.51 O
ATOM 4 OP2 A B 361 -81.537 -1.233 -56.036 1.00 11.51 O
ATOM 5 O5' A B 361 -81.569 1.273 -56.228 1.00 11.50 O
ATOM 6 C5' A B 361 -82.929 1.505 -56.607 1.00 11.50 C
ATOM 7 C4' A B 361 -83.088 2.640 -57.607 1.00 11.51 C
ATOM 8 O4' A B 361 -82.712 3.900 -56.998 1.00 11.51 O
ATOM 9 C3' A B 361 -82.253 2.545 -58.879 1.00 11.51 C
ATOM 10 O3' A B 361 -82.886 1.778 -59.900 1.00 11.51 O
ATOM 11 C2' A B 361 -82.033 4.005 -59.276 1.00 11.51 C
ATOM 12 O2' A B 361 -83.115 4.483 -60.068 1.00 11.51 O
ATOM 13 C1' A B 361 -82.048 4.721 -57.925 1.00 11.51 C
ATOM 14 N9 A B 361 -80.704 4.976 -57.409 1.00 11.50 N
ATOM 15 C8 A B 361 -80.193 4.348 -56.329 1.00 11.50 C
ATOM 16 N7 A B 361 -79.006 4.765 -56.019 1.00 11.50 N
ATOM 17 C5 A B 361 -78.708 5.740 -56.957 1.00 11.50 C
ATOM 18 C6 A B 361 -77.562 6.556 -57.170 1.00 11.50 C
ATOM 19 N6 A B 361 -76.447 6.529 -56.421 1.00 11.50 N
ATOM 20 N1 A B 361 -77.580 7.420 -58.201 1.00 11.50 N
ATOM 21 C2 A B 361 -78.693 7.437 -58.941 1.00 11.50 C
ATOM 22 N3 A B 361 -79.823 6.716 -58.839 1.00 11.50 N
ATOM 23 C4 A B 361 -79.768 5.875 -57.812 1.00 11.50 C
ATOM 24 P A B 362 -82.013 0.772 -60.792 1.00 20.04 P
ATOM 25 OP1 A B 362 -82.960 -0.056 -61.585 1.00 20.04 O
ATOM 26 OP2 A B 362 -81.078 0.092 -59.867 1.00 20.04 O
ATOM 27 O5' A B 362 -81.201 1.756 -61.750 1.00 20.04 O
TER

Atoms:
OP1: (-78.960,-5.306,-54.108)
OP2: (-78.944,-5.647,-56.640)
C3': (-78.856,-0.574,-56.226)
C1': (-77.284,-0.451,-57.944)
C5': (-77.633,-2.485,-55.025)
O6: (-79.515,-2.790,-62.882)
O4': (-76.780,-1.324,-56.963)
C8: (-78.503,-2.429,-58.835)
C2: (-77.725,0.198,-62.228)
C6: (-78.913,-1.930,-62.245)
C5: (-78.638,-1.953,-60.883)
C4: (-77.950,-0.905,-60.337)
P: (-78.444,-4.930,-55.436)
C4': (-77.546,-1.167,-55.743)
C2': (-78.387,0.378,-57.290)
O2': (-77.820,1.534,-56.697)
N1: (-78.407,-0.799,-62.861)
N2: (-77.327,1.199,-63.035)
N3: (-77.473,0.201,-60.934)
N7: (-78.982,-2.911,-59.947)
N9: (-77.842,-1.249,-59.019)
O5': (-78.565,-3.362,-55.643)
O3': (-79.610,0.056,-55.214)
OP1: (-81.742,0.197,-53.936)
OP2: (-81.537,-1.233,-56.036)
C3': (-82.253,2.545,-58.879)
C1': (-82.048,4.721,-57.925)
C5': (-82.929,1.505,-56.607)
O4': (-82.712,3.900,-56.998)
C8: (-80.193,4.348,-56.329)
O2': (-83.115,4.483,-60.068)
C6: (-77.562,6.556,-57.170)
C5: (-78.708,5.740,-56.957)
C4: (-79.768,5.875,-57.812)
P: (-81.206,0.010,-55.310)
C4': (-83.088,2.640,-57.607)
C2': (-82.033,4.005,-59.276)
C2: (-78.693,7.437,-58.941)
N1: (-77.580,7.420,-58.201)
N3: (-79.823,6.716,-58.839)
N6: (-76.447,6.529,-56.421)
N7: (-79.006,4.765,-56.019)
N9: (-80.704,4.976,-57.409)
O5': (-81.569,1.273,-56.228)
O3': (-82.886,1.778,-59.900)
Image (generated by PyMOL):
PyMOL image
show in jmol