ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A705:A706

Extra

PDB:
ATOM 1 O3' C A 704 -1.456 118.181 69.881 1.00 21.74 O
ATOM 2 P G A 705 -1.368 116.599 70.116 1.00 20.46 P
ATOM 3 OP1 G A 705 0.042 116.158 69.926 1.00 22.30 O
ATOM 4 OP2 G A 705 -2.445 115.989 69.310 1.00 20.26 O
ATOM 5 O5' G A 705 -1.770 116.435 71.648 1.00 28.60 O
ATOM 6 C5' G A 705 -0.929 116.989 72.675 1.00 27.69 C
ATOM 7 C4' G A 705 -1.420 116.594 74.043 1.00 27.42 C
ATOM 8 O4' G A 705 -2.640 117.297 74.370 1.00 27.42 O
ATOM 9 C3' G A 705 -1.772 115.138 74.240 1.00 28.19 C
ATOM 10 O3' G A 705 -0.617 114.359 74.468 1.00 30.14 O
ATOM 11 C2' G A 705 -2.678 115.188 75.459 1.00 27.31 C
ATOM 12 O2' G A 705 -1.944 115.275 76.662 1.00 29.03 O
ATOM 13 C1' G A 705 -3.420 116.503 75.241 1.00 26.39 C
ATOM 14 N9 G A 705 -4.709 116.269 74.618 1.00 23.25 N
ATOM 15 C8 G A 705 -4.977 116.196 73.278 1.00 22.04 C
ATOM 16 N7 G A 705 -6.225 115.922 73.019 1.00 21.10 N
ATOM 17 C5 G A 705 -6.814 115.813 74.265 1.00 21.02 C
ATOM 18 C6 G A 705 -8.135 115.506 74.610 1.00 18.82 C
ATOM 19 O6 G A 705 -9.085 115.248 73.857 1.00 20.64 O
ATOM 20 N1 G A 705 -8.312 115.506 75.991 1.00 17.99 N
ATOM 21 C2 G A 705 -7.329 115.766 76.916 1.00 19.27 C
ATOM 22 N2 G A 705 -7.704 115.722 78.199 1.00 19.96 N
ATOM 23 N3 G A 705 -6.077 116.046 76.602 1.00 20.12 N
ATOM 24 C4 G A 705 -5.893 116.048 75.265 1.00 21.49 C
ATOM 25 P A A 706 -0.515 112.905 73.803 1.00 32.01 P
ATOM 26 OP1 A A 706 0.827 112.351 74.148 1.00 40.48 O
ATOM 27 OP2 A A 706 -0.932 113.016 72.385 1.00 37.87 O
ATOM 28 O5' A A 706 -1.633 112.060 74.556 1.00 24.25 O
TER

ATOM 1 O3' G B 705 -0.617 114.359 74.468 1.00 30.14 O
ATOM 2 P A B 706 -0.515 112.905 73.803 1.00 32.01 P
ATOM 3 OP1 A B 706 0.827 112.351 74.148 1.00 40.48 O
ATOM 4 OP2 A B 706 -0.932 113.016 72.385 1.00 37.87 O
ATOM 5 O5' A B 706 -1.633 112.060 74.556 1.00 24.25 O
ATOM 6 C5' A B 706 -2.010 110.761 74.075 1.00 20.21 C
ATOM 7 C4' A B 706 -2.749 109.997 75.147 1.00 18.41 C
ATOM 8 O4' A B 706 -1.847 109.647 76.216 1.00 19.95 O
ATOM 9 C3' A B 706 -3.857 110.788 75.797 1.00 17.33 C
ATOM 10 O3' A B 706 -5.031 110.627 75.037 1.00 18.18 O
ATOM 11 C2' A B 706 -3.953 110.174 77.184 1.00 16.49 C
ATOM 12 O2' A B 706 -4.732 109.001 77.197 1.00 16.37 O
ATOM 13 C1' A B 706 -2.497 109.801 77.458 1.00 16.46 C
ATOM 14 N9 A B 706 -1.747 110.798 78.216 1.00 32.41 N
ATOM 15 C8 A B 706 -0.839 111.692 77.722 1.00 31.74 C
ATOM 16 N7 A B 706 -0.309 112.461 78.634 1.00 32.74 N
ATOM 17 C5 A B 706 -0.910 112.046 79.808 1.00 31.08 C
ATOM 18 C6 A B 706 -0.771 112.468 81.135 1.00 31.79 C
ATOM 19 N6 A B 706 0.053 113.437 81.518 1.00 35.26 N
ATOM 20 N1 A B 706 -1.515 111.852 82.074 1.00 30.52 N
ATOM 21 C2 A B 706 -2.335 110.877 81.692 1.00 31.58 C
ATOM 22 N3 A B 706 -2.553 110.390 80.471 1.00 30.73 N
ATOM 23 C4 A B 706 -1.799 111.026 79.565 1.00 30.44 C
ATOM 24 P A B 707 -6.060 111.840 74.917 1.00 54.64 P
ATOM 25 OP1 A B 707 -6.995 111.518 73.806 1.00 83.33 O
ATOM 26 OP2 A B 707 -5.274 113.099 74.869 1.00 82.67 O
ATOM 27 O5' A B 707 -6.867 111.749 76.286 1.00 0.79 O
TER

Atoms:
OP1: (0.042,116.158,69.926)
OP2: (-2.445,115.989,69.310)
C3': (-1.772,115.138,74.240)
C1': (-3.420,116.503,75.241)
C5': (-0.929,116.989,72.675)
O6: (-9.085,115.248,73.857)
O4': (-2.640,117.297,74.370)
C8: (-4.977,116.196,73.278)
C2: (-7.329,115.766,76.916)
C6: (-8.135,115.506,74.610)
C5: (-6.814,115.813,74.265)
C4: (-5.893,116.048,75.265)
P: (-1.368,116.599,70.116)
C4': (-1.420,116.594,74.043)
C2': (-2.678,115.188,75.459)
O2': (-1.944,115.275,76.662)
N1: (-8.312,115.506,75.991)
N2: (-7.704,115.722,78.199)
N3: (-6.077,116.046,76.602)
N7: (-6.225,115.922,73.019)
N9: (-4.709,116.269,74.618)
O5': (-1.770,116.435,71.648)
O3': (-0.617,114.359,74.468)
OP1: (0.827,112.351,74.148)
OP2: (-0.932,113.016,72.385)
C3': (-3.857,110.788,75.797)
C1': (-2.497,109.801,77.458)
C5': (-2.010,110.761,74.075)
O4': (-1.847,109.647,76.216)
C8: (-0.839,111.692,77.722)
O2': (-4.732,109.001,77.197)
C6: (-0.771,112.468,81.135)
C5: (-0.910,112.046,79.808)
C4: (-1.799,111.026,79.565)
P: (-0.515,112.905,73.803)
C4': (-2.749,109.997,75.147)
C2': (-3.953,110.174,77.184)
C2: (-2.335,110.877,81.692)
N1: (-1.515,111.852,82.074)
N3: (-2.553,110.390,80.471)
N6: (0.053,113.437,81.518)
N7: (-0.309,112.461,78.634)
N9: (-1.747,110.798,78.216)
O5': (-1.633,112.060,74.556)
O3': (-5.031,110.627,75.037)
Image (generated by PyMOL):
PyMOL image
show in jmol