Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11408:11409
Extra
PDB:
ATOM 1 O3' U A1407 61.926 58.284 101.709 1.00 60.84 O
ATOM 2 P G A1408 63.351 58.414 100.992 1.00 64.41 P
ATOM 3 OP1 G A1408 64.387 58.130 102.023 1.00 64.67 O
ATOM 4 OP2 G A1408 63.359 59.701 100.304 1.00 64.79 O
ATOM 5 O5' G A1408 63.329 57.262 99.921 1.00 63.65 O
ATOM 6 C5' G A1408 63.371 55.913 100.306 1.00 63.19 C
ATOM 7 C4' G A1408 63.021 55.039 99.152 1.00 62.51 C
ATOM 8 O4' G A1408 61.717 55.409 98.669 1.00 62.42 O
ATOM 9 C3' G A1408 63.911 55.167 97.921 1.00 62.34 C
ATOM 10 O3' G A1408 65.124 54.450 98.040 1.00 62.21 O
ATOM 11 C2' G A1408 63.000 54.646 96.820 1.00 61.78 C
ATOM 12 O2' G A1408 62.939 53.214 96.833 1.00 61.21 O
ATOM 13 C1' G A1408 61.648 55.201 97.280 1.00 61.99 C
ATOM 14 N9 G A1408 61.367 56.480 96.646 1.00 62.34 N
ATOM 15 C8 G A1408 61.716 57.709 97.115 1.00 62.99 C
ATOM 16 N7 G A1408 61.339 58.630 96.274 1.00 63.15 N
ATOM 17 C5 G A1408 60.740 57.967 95.209 1.00 62.58 C
ATOM 18 C6 G A1408 60.155 58.432 94.017 1.00 62.47 C
ATOM 19 O6 G A1408 60.010 59.574 93.607 1.00 62.86 O
ATOM 20 N1 G A1408 59.648 57.401 93.252 1.00 61.83 N
ATOM 21 C2 G A1408 59.683 56.083 93.557 1.00 61.35 C
ATOM 22 N2 G A1408 59.115 55.280 92.644 1.00 60.79 N
ATOM 23 N3 G A1408 60.243 55.620 94.662 1.00 61.45 N
ATOM 24 C4 G A1408 60.746 56.617 95.428 1.00 62.07 C
ATOM 25 P A A1409 66.486 55.003 97.384 1.00 66.59 P
ATOM 26 OP1 A A1409 67.524 53.982 97.645 1.00 66.37 O
ATOM 27 OP2 A A1409 66.697 56.382 97.884 1.00 67.30 O
ATOM 28 O5' A A1409 66.167 55.044 95.827 1.00 66.21 O
TER
ATOM 1 O3' G B1408 65.124 54.450 98.040 1.00 62.21 O
ATOM 2 P A B1409 66.486 55.003 97.384 1.00 66.59 P
ATOM 3 OP1 A B1409 67.524 53.982 97.645 1.00 66.37 O
ATOM 4 OP2 A B1409 66.697 56.382 97.884 1.00 67.30 O
ATOM 5 O5' A B1409 66.167 55.044 95.827 1.00 66.21 O
ATOM 6 C5' A B1409 66.986 55.812 94.968 1.00 66.41 C
ATOM 7 C4' A B1409 67.113 55.199 93.604 1.00 65.87 C
ATOM 8 O4' A B1409 67.555 53.832 93.711 1.00 65.40 O
ATOM 9 C3' A B1409 65.839 55.096 92.806 1.00 65.52 C
ATOM 10 O3' A B1409 65.440 56.323 92.239 1.00 65.86 O
ATOM 11 C2' A B1409 66.166 54.019 91.784 1.00 64.92 C
ATOM 12 O2' A B1409 66.881 54.569 90.692 1.00 64.99 O
ATOM 13 C1' A B1409 67.105 53.107 92.590 1.00 64.83 C
ATOM 14 N9 A B1409 66.432 51.893 93.066 1.00 64.39 N
ATOM 15 C8 A B1409 66.200 51.550 94.371 1.00 64.52 C
ATOM 16 N7 A B1409 65.582 50.403 94.500 1.00 64.05 N
ATOM 17 C5 A B1409 65.401 49.969 93.195 1.00 63.59 C
ATOM 18 C6 A B1409 64.796 48.812 92.658 1.00 62.99 C
ATOM 19 N6 A B1409 64.246 47.831 93.387 1.00 62.73 N
ATOM 20 N1 A B1409 64.766 48.699 91.319 1.00 62.67 N
ATOM 21 C2 A B1409 65.328 49.688 90.609 1.00 62.95 C
ATOM 22 N3 A B1409 65.912 50.813 90.984 1.00 63.50 N
ATOM 23 C4 A B1409 65.916 50.887 92.306 1.00 63.79 C
ATOM 24 P G B1410 64.030 56.947 92.667 1.00 64.46 P
ATOM 25 OP1 G B1410 64.002 58.361 92.214 1.00 64.95 O
ATOM 26 OP2 G B1410 63.857 56.662 94.127 1.00 64.64 O
ATOM 27 O5' G B1410 63.012 56.089 91.796 1.00 63.83 O
TER
ATOM 2 P G A1408 63.351 58.414 100.992 1.00 64.41 P
ATOM 3 OP1 G A1408 64.387 58.130 102.023 1.00 64.67 O
ATOM 4 OP2 G A1408 63.359 59.701 100.304 1.00 64.79 O
ATOM 5 O5' G A1408 63.329 57.262 99.921 1.00 63.65 O
ATOM 6 C5' G A1408 63.371 55.913 100.306 1.00 63.19 C
ATOM 7 C4' G A1408 63.021 55.039 99.152 1.00 62.51 C
ATOM 8 O4' G A1408 61.717 55.409 98.669 1.00 62.42 O
ATOM 9 C3' G A1408 63.911 55.167 97.921 1.00 62.34 C
ATOM 10 O3' G A1408 65.124 54.450 98.040 1.00 62.21 O
ATOM 11 C2' G A1408 63.000 54.646 96.820 1.00 61.78 C
ATOM 12 O2' G A1408 62.939 53.214 96.833 1.00 61.21 O
ATOM 13 C1' G A1408 61.648 55.201 97.280 1.00 61.99 C
ATOM 14 N9 G A1408 61.367 56.480 96.646 1.00 62.34 N
ATOM 15 C8 G A1408 61.716 57.709 97.115 1.00 62.99 C
ATOM 16 N7 G A1408 61.339 58.630 96.274 1.00 63.15 N
ATOM 17 C5 G A1408 60.740 57.967 95.209 1.00 62.58 C
ATOM 18 C6 G A1408 60.155 58.432 94.017 1.00 62.47 C
ATOM 19 O6 G A1408 60.010 59.574 93.607 1.00 62.86 O
ATOM 20 N1 G A1408 59.648 57.401 93.252 1.00 61.83 N
ATOM 21 C2 G A1408 59.683 56.083 93.557 1.00 61.35 C
ATOM 22 N2 G A1408 59.115 55.280 92.644 1.00 60.79 N
ATOM 23 N3 G A1408 60.243 55.620 94.662 1.00 61.45 N
ATOM 24 C4 G A1408 60.746 56.617 95.428 1.00 62.07 C
ATOM 25 P A A1409 66.486 55.003 97.384 1.00 66.59 P
ATOM 26 OP1 A A1409 67.524 53.982 97.645 1.00 66.37 O
ATOM 27 OP2 A A1409 66.697 56.382 97.884 1.00 67.30 O
ATOM 28 O5' A A1409 66.167 55.044 95.827 1.00 66.21 O
TER
ATOM 1 O3' G B1408 65.124 54.450 98.040 1.00 62.21 O
ATOM 2 P A B1409 66.486 55.003 97.384 1.00 66.59 P
ATOM 3 OP1 A B1409 67.524 53.982 97.645 1.00 66.37 O
ATOM 4 OP2 A B1409 66.697 56.382 97.884 1.00 67.30 O
ATOM 5 O5' A B1409 66.167 55.044 95.827 1.00 66.21 O
ATOM 6 C5' A B1409 66.986 55.812 94.968 1.00 66.41 C
ATOM 7 C4' A B1409 67.113 55.199 93.604 1.00 65.87 C
ATOM 8 O4' A B1409 67.555 53.832 93.711 1.00 65.40 O
ATOM 9 C3' A B1409 65.839 55.096 92.806 1.00 65.52 C
ATOM 10 O3' A B1409 65.440 56.323 92.239 1.00 65.86 O
ATOM 11 C2' A B1409 66.166 54.019 91.784 1.00 64.92 C
ATOM 12 O2' A B1409 66.881 54.569 90.692 1.00 64.99 O
ATOM 13 C1' A B1409 67.105 53.107 92.590 1.00 64.83 C
ATOM 14 N9 A B1409 66.432 51.893 93.066 1.00 64.39 N
ATOM 15 C8 A B1409 66.200 51.550 94.371 1.00 64.52 C
ATOM 16 N7 A B1409 65.582 50.403 94.500 1.00 64.05 N
ATOM 17 C5 A B1409 65.401 49.969 93.195 1.00 63.59 C
ATOM 18 C6 A B1409 64.796 48.812 92.658 1.00 62.99 C
ATOM 19 N6 A B1409 64.246 47.831 93.387 1.00 62.73 N
ATOM 20 N1 A B1409 64.766 48.699 91.319 1.00 62.67 N
ATOM 21 C2 A B1409 65.328 49.688 90.609 1.00 62.95 C
ATOM 22 N3 A B1409 65.912 50.813 90.984 1.00 63.50 N
ATOM 23 C4 A B1409 65.916 50.887 92.306 1.00 63.79 C
ATOM 24 P G B1410 64.030 56.947 92.667 1.00 64.46 P
ATOM 25 OP1 G B1410 64.002 58.361 92.214 1.00 64.95 O
ATOM 26 OP2 G B1410 63.857 56.662 94.127 1.00 64.64 O
ATOM 27 O5' G B1410 63.012 56.089 91.796 1.00 63.83 O
TER
Atoms:
OP1: (64.387,58.130,102.023)
OP2: (63.359,59.701,100.304)
C3': (63.911,55.167,97.921)
C1': (61.648,55.201,97.280)
C5': (63.371,55.913,100.306)
O6: (60.010,59.574,93.607)
O4': (61.717,55.409,98.669)
C8: (61.716,57.709,97.115)
C2: (59.683,56.083,93.557)
C6: (60.155,58.432,94.017)
C5: (60.740,57.967,95.209)
C4: (60.746,56.617,95.428)
P: (63.351,58.414,100.992)
C4': (63.021,55.039,99.152)
C2': (63.000,54.646,96.820)
O2': (62.939,53.214,96.833)
N1: (59.648,57.401,93.252)
N2: (59.115,55.280,92.644)
N3: (60.243,55.620,94.662)
N7: (61.339,58.630,96.274)
N9: (61.367,56.480,96.646)
O5': (63.329,57.262,99.921)
O3': (65.124,54.450,98.040)
OP2: (63.359,59.701,100.304)
C3': (63.911,55.167,97.921)
C1': (61.648,55.201,97.280)
C5': (63.371,55.913,100.306)
O6: (60.010,59.574,93.607)
O4': (61.717,55.409,98.669)
C8: (61.716,57.709,97.115)
C2: (59.683,56.083,93.557)
C6: (60.155,58.432,94.017)
C5: (60.740,57.967,95.209)
C4: (60.746,56.617,95.428)
P: (63.351,58.414,100.992)
C4': (63.021,55.039,99.152)
C2': (63.000,54.646,96.820)
O2': (62.939,53.214,96.833)
N1: (59.648,57.401,93.252)
N2: (59.115,55.280,92.644)
N3: (60.243,55.620,94.662)
N7: (61.339,58.630,96.274)
N9: (61.367,56.480,96.646)
O5': (63.329,57.262,99.921)
O3': (65.124,54.450,98.040)
OP1: (67.524,53.982,97.645)
OP2: (66.697,56.382,97.884)
C3': (65.839,55.096,92.806)
C1': (67.105,53.107,92.590)
C5': (66.986,55.812,94.968)
O4': (67.555,53.832,93.711)
C8: (66.200,51.550,94.371)
O2': (66.881,54.569,90.692)
C6: (64.796,48.812,92.658)
C5: (65.401,49.969,93.195)
C4: (65.916,50.887,92.306)
P: (66.486,55.003,97.384)
C4': (67.113,55.199,93.604)
C2': (66.166,54.019,91.784)
C2: (65.328,49.688,90.609)
N1: (64.766,48.699,91.319)
N3: (65.912,50.813,90.984)
N6: (64.246,47.831,93.387)
N7: (65.582,50.403,94.500)
N9: (66.432,51.893,93.066)
O5': (66.167,55.044,95.827)
O3': (65.440,56.323,92.239)
OP2: (66.697,56.382,97.884)
C3': (65.839,55.096,92.806)
C1': (67.105,53.107,92.590)
C5': (66.986,55.812,94.968)
O4': (67.555,53.832,93.711)
C8: (66.200,51.550,94.371)
O2': (66.881,54.569,90.692)
C6: (64.796,48.812,92.658)
C5: (65.401,49.969,93.195)
C4: (65.916,50.887,92.306)
P: (66.486,55.003,97.384)
C4': (67.113,55.199,93.604)
C2': (66.166,54.019,91.784)
C2: (65.328,49.688,90.609)
N1: (64.766,48.699,91.319)
N3: (65.912,50.813,90.984)
N6: (64.246,47.831,93.387)
N7: (65.582,50.403,94.500)
N9: (66.432,51.893,93.066)
O5': (66.167,55.044,95.827)
O3': (65.440,56.323,92.239)
Image (generated by PyMOL):