Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A679:A680
Extra
PDB:
ATOM 1 O3' G A 678 57.639 68.952 50.107 1.00 54.19 O
ATOM 2 P G A 679 58.771 70.025 50.527 1.00 55.05 P
ATOM 3 OP1 G A 679 59.281 69.774 51.903 1.00 54.14 O
ATOM 4 OP2 G A 679 58.200 71.349 50.187 1.00 55.01 O
ATOM 5 O5' G A 679 59.979 69.701 49.547 1.00 54.71 O
ATOM 6 C5' G A 679 60.720 68.485 49.710 1.00 56.22 C
ATOM 7 C4' G A 679 61.808 68.408 48.683 1.00 57.08 C
ATOM 8 O4' G A 679 61.239 68.267 47.353 1.00 58.08 O
ATOM 9 C3' G A 679 62.641 69.672 48.574 1.00 57.28 C
ATOM 10 O3' G A 679 63.630 69.788 49.579 1.00 56.05 O
ATOM 11 C2' G A 679 63.253 69.541 47.194 1.00 57.96 C
ATOM 12 O2' G A 679 64.396 68.710 47.176 1.00 58.80 O
ATOM 13 C1' G A 679 62.080 68.931 46.419 1.00 58.98 C
ATOM 14 N9 G A 679 61.326 70.005 45.789 1.00 59.75 N
ATOM 15 C8 G A 679 60.258 70.713 46.289 1.00 59.77 C
ATOM 16 N7 G A 679 59.845 71.649 45.476 1.00 60.21 N
ATOM 17 C5 G A 679 60.679 71.536 44.375 1.00 60.89 C
ATOM 18 C6 G A 679 60.708 72.273 43.170 1.00 61.69 C
ATOM 19 O6 G A 679 59.969 73.206 42.817 1.00 60.35 O
ATOM 20 N1 G A 679 61.727 71.827 42.327 1.00 62.45 N
ATOM 21 C2 G A 679 62.595 70.800 42.614 1.00 62.46 C
ATOM 22 N2 G A 679 63.499 70.508 41.689 1.00 64.18 N
ATOM 23 N3 G A 679 62.573 70.109 43.729 1.00 60.92 N
ATOM 24 C4 G A 679 61.596 70.526 44.557 1.00 60.57 C
ATOM 25 P A A 680 63.969 71.244 50.165 1.00 56.63 P
ATOM 26 OP1 A A 680 65.069 71.188 51.165 1.00 56.32 O
ATOM 27 OP2 A A 680 62.653 71.827 50.537 1.00 54.63 O
ATOM 28 O5' A A 680 64.520 72.060 48.913 1.00 57.26 O
TER
ATOM 1 O3' G B 679 63.630 69.788 49.579 1.00 56.05 O
ATOM 2 P A B 680 63.969 71.244 50.165 1.00 56.63 P
ATOM 3 OP1 A B 680 65.069 71.188 51.165 1.00 56.32 O
ATOM 4 OP2 A B 680 62.653 71.827 50.537 1.00 54.63 O
ATOM 5 O5' A B 680 64.520 72.060 48.913 1.00 57.26 O
ATOM 6 C5' A B 680 64.734 73.475 49.006 1.00 55.54 C
ATOM 7 C4' A B 680 66.012 73.859 48.306 1.00 55.45 C
ATOM 8 O4' A B 680 67.130 73.135 48.877 1.00 56.43 O
ATOM 9 C3' A B 680 66.071 73.517 46.835 1.00 55.01 C
ATOM 10 O3' A B 680 65.420 74.525 46.076 1.00 55.35 O
ATOM 11 C2' A B 680 67.564 73.492 46.566 1.00 55.32 C
ATOM 12 O2' A B 680 68.065 74.800 46.430 1.00 55.68 O
ATOM 13 C1' A B 680 68.093 72.873 47.865 1.00 56.40 C
ATOM 14 N9 A B 680 68.276 71.425 47.774 1.00 57.79 N
ATOM 15 C8 A B 680 67.440 70.435 48.237 1.00 58.44 C
ATOM 16 N7 A B 680 67.846 69.224 47.953 1.00 58.58 N
ATOM 17 C5 A B 680 69.036 69.426 47.272 1.00 58.89 C
ATOM 18 C6 A B 680 69.946 68.533 46.694 1.00 59.31 C
ATOM 19 N6 A B 680 69.786 67.209 46.711 1.00 58.31 N
ATOM 20 N1 A B 680 71.039 69.051 46.091 1.00 60.26 N
ATOM 21 C2 A B 680 71.191 70.384 46.080 1.00 59.70 C
ATOM 22 N3 A B 680 70.398 71.329 46.586 1.00 59.18 N
ATOM 23 C4 A B 680 69.324 70.776 47.172 1.00 58.55 C
ATOM 24 P A B 681 64.414 74.095 44.915 1.00 55.30 P
ATOM 25 OP1 A B 681 63.846 75.321 44.272 1.00 54.10 O
ATOM 26 OP2 A B 681 63.505 73.137 45.590 1.00 54.46 O
ATOM 27 O5' A B 681 65.369 73.335 43.875 1.00 56.94 O
TER
ATOM 2 P G A 679 58.771 70.025 50.527 1.00 55.05 P
ATOM 3 OP1 G A 679 59.281 69.774 51.903 1.00 54.14 O
ATOM 4 OP2 G A 679 58.200 71.349 50.187 1.00 55.01 O
ATOM 5 O5' G A 679 59.979 69.701 49.547 1.00 54.71 O
ATOM 6 C5' G A 679 60.720 68.485 49.710 1.00 56.22 C
ATOM 7 C4' G A 679 61.808 68.408 48.683 1.00 57.08 C
ATOM 8 O4' G A 679 61.239 68.267 47.353 1.00 58.08 O
ATOM 9 C3' G A 679 62.641 69.672 48.574 1.00 57.28 C
ATOM 10 O3' G A 679 63.630 69.788 49.579 1.00 56.05 O
ATOM 11 C2' G A 679 63.253 69.541 47.194 1.00 57.96 C
ATOM 12 O2' G A 679 64.396 68.710 47.176 1.00 58.80 O
ATOM 13 C1' G A 679 62.080 68.931 46.419 1.00 58.98 C
ATOM 14 N9 G A 679 61.326 70.005 45.789 1.00 59.75 N
ATOM 15 C8 G A 679 60.258 70.713 46.289 1.00 59.77 C
ATOM 16 N7 G A 679 59.845 71.649 45.476 1.00 60.21 N
ATOM 17 C5 G A 679 60.679 71.536 44.375 1.00 60.89 C
ATOM 18 C6 G A 679 60.708 72.273 43.170 1.00 61.69 C
ATOM 19 O6 G A 679 59.969 73.206 42.817 1.00 60.35 O
ATOM 20 N1 G A 679 61.727 71.827 42.327 1.00 62.45 N
ATOM 21 C2 G A 679 62.595 70.800 42.614 1.00 62.46 C
ATOM 22 N2 G A 679 63.499 70.508 41.689 1.00 64.18 N
ATOM 23 N3 G A 679 62.573 70.109 43.729 1.00 60.92 N
ATOM 24 C4 G A 679 61.596 70.526 44.557 1.00 60.57 C
ATOM 25 P A A 680 63.969 71.244 50.165 1.00 56.63 P
ATOM 26 OP1 A A 680 65.069 71.188 51.165 1.00 56.32 O
ATOM 27 OP2 A A 680 62.653 71.827 50.537 1.00 54.63 O
ATOM 28 O5' A A 680 64.520 72.060 48.913 1.00 57.26 O
TER
ATOM 1 O3' G B 679 63.630 69.788 49.579 1.00 56.05 O
ATOM 2 P A B 680 63.969 71.244 50.165 1.00 56.63 P
ATOM 3 OP1 A B 680 65.069 71.188 51.165 1.00 56.32 O
ATOM 4 OP2 A B 680 62.653 71.827 50.537 1.00 54.63 O
ATOM 5 O5' A B 680 64.520 72.060 48.913 1.00 57.26 O
ATOM 6 C5' A B 680 64.734 73.475 49.006 1.00 55.54 C
ATOM 7 C4' A B 680 66.012 73.859 48.306 1.00 55.45 C
ATOM 8 O4' A B 680 67.130 73.135 48.877 1.00 56.43 O
ATOM 9 C3' A B 680 66.071 73.517 46.835 1.00 55.01 C
ATOM 10 O3' A B 680 65.420 74.525 46.076 1.00 55.35 O
ATOM 11 C2' A B 680 67.564 73.492 46.566 1.00 55.32 C
ATOM 12 O2' A B 680 68.065 74.800 46.430 1.00 55.68 O
ATOM 13 C1' A B 680 68.093 72.873 47.865 1.00 56.40 C
ATOM 14 N9 A B 680 68.276 71.425 47.774 1.00 57.79 N
ATOM 15 C8 A B 680 67.440 70.435 48.237 1.00 58.44 C
ATOM 16 N7 A B 680 67.846 69.224 47.953 1.00 58.58 N
ATOM 17 C5 A B 680 69.036 69.426 47.272 1.00 58.89 C
ATOM 18 C6 A B 680 69.946 68.533 46.694 1.00 59.31 C
ATOM 19 N6 A B 680 69.786 67.209 46.711 1.00 58.31 N
ATOM 20 N1 A B 680 71.039 69.051 46.091 1.00 60.26 N
ATOM 21 C2 A B 680 71.191 70.384 46.080 1.00 59.70 C
ATOM 22 N3 A B 680 70.398 71.329 46.586 1.00 59.18 N
ATOM 23 C4 A B 680 69.324 70.776 47.172 1.00 58.55 C
ATOM 24 P A B 681 64.414 74.095 44.915 1.00 55.30 P
ATOM 25 OP1 A B 681 63.846 75.321 44.272 1.00 54.10 O
ATOM 26 OP2 A B 681 63.505 73.137 45.590 1.00 54.46 O
ATOM 27 O5' A B 681 65.369 73.335 43.875 1.00 56.94 O
TER
Atoms:
OP1: (59.281,69.774,51.903)
OP2: (58.200,71.349,50.187)
C3': (62.641,69.672,48.574)
C1': (62.080,68.931,46.419)
C5': (60.720,68.485,49.710)
O6: (59.969,73.206,42.817)
O4': (61.239,68.267,47.353)
C8: (60.258,70.713,46.289)
C2: (62.595,70.800,42.614)
C6: (60.708,72.273,43.170)
C5: (60.679,71.536,44.375)
C4: (61.596,70.526,44.557)
P: (58.771,70.025,50.527)
C4': (61.808,68.408,48.683)
C2': (63.253,69.541,47.194)
O2': (64.396,68.710,47.176)
N1: (61.727,71.827,42.327)
N2: (63.499,70.508,41.689)
N3: (62.573,70.109,43.729)
N7: (59.845,71.649,45.476)
N9: (61.326,70.005,45.789)
O5': (59.979,69.701,49.547)
O3': (63.630,69.788,49.579)
OP2: (58.200,71.349,50.187)
C3': (62.641,69.672,48.574)
C1': (62.080,68.931,46.419)
C5': (60.720,68.485,49.710)
O6: (59.969,73.206,42.817)
O4': (61.239,68.267,47.353)
C8: (60.258,70.713,46.289)
C2: (62.595,70.800,42.614)
C6: (60.708,72.273,43.170)
C5: (60.679,71.536,44.375)
C4: (61.596,70.526,44.557)
P: (58.771,70.025,50.527)
C4': (61.808,68.408,48.683)
C2': (63.253,69.541,47.194)
O2': (64.396,68.710,47.176)
N1: (61.727,71.827,42.327)
N2: (63.499,70.508,41.689)
N3: (62.573,70.109,43.729)
N7: (59.845,71.649,45.476)
N9: (61.326,70.005,45.789)
O5': (59.979,69.701,49.547)
O3': (63.630,69.788,49.579)
OP1: (65.069,71.188,51.165)
OP2: (62.653,71.827,50.537)
C3': (66.071,73.517,46.835)
C1': (68.093,72.873,47.865)
C5': (64.734,73.475,49.006)
O4': (67.130,73.135,48.877)
C8: (67.440,70.435,48.237)
O2': (68.065,74.800,46.430)
C6: (69.946,68.533,46.694)
C5: (69.036,69.426,47.272)
C4: (69.324,70.776,47.172)
P: (63.969,71.244,50.165)
C4': (66.012,73.859,48.306)
C2': (67.564,73.492,46.566)
C2: (71.191,70.384,46.080)
N1: (71.039,69.051,46.091)
N3: (70.398,71.329,46.586)
N6: (69.786,67.209,46.711)
N7: (67.846,69.224,47.953)
N9: (68.276,71.425,47.774)
O5': (64.520,72.060,48.913)
O3': (65.420,74.525,46.076)
OP2: (62.653,71.827,50.537)
C3': (66.071,73.517,46.835)
C1': (68.093,72.873,47.865)
C5': (64.734,73.475,49.006)
O4': (67.130,73.135,48.877)
C8: (67.440,70.435,48.237)
O2': (68.065,74.800,46.430)
C6: (69.946,68.533,46.694)
C5: (69.036,69.426,47.272)
C4: (69.324,70.776,47.172)
P: (63.969,71.244,50.165)
C4': (66.012,73.859,48.306)
C2': (67.564,73.492,46.566)
C2: (71.191,70.384,46.080)
N1: (71.039,69.051,46.091)
N3: (70.398,71.329,46.586)
N6: (69.786,67.209,46.711)
N7: (67.846,69.224,47.953)
N9: (68.276,71.425,47.774)
O5': (64.520,72.060,48.913)
O3': (65.420,74.525,46.076)
Image (generated by PyMOL):