ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2PXP:B24:B25

Extra

PDB:
ATOM 1 O3' C A 23 80.934 -42.694 63.771 1.00 40.42 O
ATOM 2 P G A 24 79.443 -42.757 63.170 1.00 34.92 P
ATOM 3 OP1 G A 24 79.457 -43.881 62.196 1.00 31.90 O
ATOM 4 OP2 G A 24 78.980 -41.407 62.743 1.00 32.00 O
ATOM 5 O5' G A 24 78.554 -43.193 64.412 1.00 34.16 O
ATOM 6 C5' G A 24 78.555 -44.541 64.837 1.00 33.38 C
ATOM 7 C4' G A 24 77.702 -44.704 66.062 1.00 33.70 C
ATOM 8 O4' G A 24 78.242 -43.896 67.136 1.00 33.44 O
ATOM 9 C3' G A 24 76.276 -44.205 65.964 1.00 34.92 C
ATOM 10 O3' G A 24 75.449 -45.137 65.276 1.00 38.50 O
ATOM 11 C2' G A 24 75.907 -44.131 67.434 1.00 33.52 C
ATOM 12 O2' G A 24 75.634 -45.417 67.951 1.00 32.15 O
ATOM 13 C1' G A 24 77.200 -43.569 68.036 1.00 31.68 C
ATOM 14 N9 G A 24 77.121 -42.120 68.132 1.00 28.89 N
ATOM 15 C8 G A 24 77.643 -41.192 67.261 1.00 28.71 C
ATOM 16 N7 G A 24 77.310 -39.962 67.567 1.00 27.63 N
ATOM 17 C5 G A 24 76.540 -40.092 68.715 1.00 26.46 C
ATOM 18 C6 G A 24 75.885 -39.121 69.474 1.00 28.25 C
ATOM 19 O6 G A 24 75.819 -37.909 69.266 1.00 32.94 O
ATOM 20 N1 G A 24 75.237 -39.674 70.570 1.00 27.28 N
ATOM 21 C2 G A 24 75.218 -41.007 70.880 1.00 27.49 C
ATOM 22 N2 G A 24 74.548 -41.347 71.986 1.00 30.38 N
ATOM 23 N3 G A 24 75.810 -41.936 70.162 1.00 26.04 N
ATOM 24 C4 G A 24 76.446 -41.411 69.098 1.00 27.05 C
ATOM 25 P A A 25 74.389 -44.606 64.188 1.00 40.23 P
ATOM 26 OP1 A A 25 73.518 -45.744 63.805 1.00 37.37 O
ATOM 27 OP2 A A 25 75.137 -43.855 63.146 1.00 36.70 O
ATOM 28 O5' A A 25 73.497 -43.563 64.995 1.00 39.84 O
TER

ATOM 1 O3' G B 24 75.449 -45.137 65.276 1.00 38.50 O
ATOM 2 P A B 25 74.389 -44.606 64.188 1.00 40.23 P
ATOM 3 OP1 A B 25 73.518 -45.744 63.805 1.00 37.37 O
ATOM 4 OP2 A B 25 75.137 -43.855 63.146 1.00 36.70 O
ATOM 5 O5' A B 25 73.497 -43.563 64.995 1.00 39.84 O
ATOM 6 C5' A B 25 72.483 -42.804 64.346 1.00 38.44 C
ATOM 7 C4' A B 25 71.180 -42.935 65.097 1.00 37.65 C
ATOM 8 O4' A B 25 70.642 -44.271 64.928 1.00 36.80 O
ATOM 9 C3' A B 25 71.284 -42.766 66.600 1.00 38.02 C
ATOM 10 O3' A B 25 71.244 -41.387 66.927 1.00 39.62 O
ATOM 11 C2' A B 25 70.042 -43.501 67.085 1.00 36.77 C
ATOM 12 O2' A B 25 68.871 -42.730 66.909 1.00 37.50 O
ATOM 13 C1' A B 25 69.995 -44.678 66.114 1.00 34.23 C
ATOM 14 N9 A B 25 70.664 -45.888 66.578 1.00 30.85 N
ATOM 15 C8 A B 25 71.727 -46.518 65.971 1.00 31.52 C
ATOM 16 N7 A B 25 72.089 -47.634 66.567 1.00 31.72 N
ATOM 17 C5 A B 25 71.220 -47.732 67.642 1.00 28.61 C
ATOM 18 C6 A B 25 71.088 -48.687 68.647 1.00 29.81 C
ATOM 19 N6 A B 25 71.851 -49.779 68.727 1.00 29.07 N
ATOM 20 N1 A B 25 70.128 -48.490 69.582 1.00 30.69 N
ATOM 21 C2 A B 25 69.357 -47.395 69.486 1.00 29.44 C
ATOM 22 N3 A B 25 69.387 -46.424 68.577 1.00 28.34 N
ATOM 23 C4 A B 25 70.349 -46.656 67.673 1.00 28.37 C
ATOM 24 P A B 26 72.346 -40.771 67.917 1.00 40.96 P
ATOM 25 OP1 A B 26 72.182 -39.292 67.898 1.00 38.82 O
ATOM 26 OP2 A B 26 73.659 -41.370 67.564 1.00 38.59 O
ATOM 27 O5' A B 26 71.888 -41.285 69.347 1.00 39.31 O
TER

Atoms:
OP1: (79.457,-43.881,62.196)
OP2: (78.980,-41.407,62.743)
C3': (76.276,-44.205,65.964)
C1': (77.200,-43.569,68.036)
C5': (78.555,-44.541,64.837)
O6: (75.819,-37.909,69.266)
O4': (78.242,-43.896,67.136)
C8: (77.643,-41.192,67.261)
C2: (75.218,-41.007,70.880)
C6: (75.885,-39.121,69.474)
C5: (76.540,-40.092,68.715)
C4: (76.446,-41.411,69.098)
P: (79.443,-42.757,63.170)
C4': (77.702,-44.704,66.062)
C2': (75.907,-44.131,67.434)
O2': (75.634,-45.417,67.951)
N1: (75.237,-39.674,70.570)
N2: (74.548,-41.347,71.986)
N3: (75.810,-41.936,70.162)
N7: (77.310,-39.962,67.567)
N9: (77.121,-42.120,68.132)
O5': (78.554,-43.193,64.412)
O3': (75.449,-45.137,65.276)
OP1: (73.518,-45.744,63.805)
OP2: (75.137,-43.855,63.146)
C3': (71.284,-42.766,66.600)
C1': (69.995,-44.678,66.114)
C5': (72.483,-42.804,64.346)
O4': (70.642,-44.271,64.928)
C8: (71.727,-46.518,65.971)
O2': (68.871,-42.730,66.909)
C6: (71.088,-48.687,68.647)
C5: (71.220,-47.732,67.642)
C4: (70.349,-46.656,67.673)
P: (74.389,-44.606,64.188)
C4': (71.180,-42.935,65.097)
C2': (70.042,-43.501,67.085)
C2: (69.357,-47.395,69.486)
N1: (70.128,-48.490,69.582)
N3: (69.387,-46.424,68.577)
N6: (71.851,-49.779,68.727)
N7: (72.089,-47.634,66.567)
N9: (70.664,-45.888,66.578)
O5': (73.497,-43.563,64.995)
O3': (71.244,-41.387,66.927)
Image (generated by PyMOL):
PyMOL image
show in jmol