Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VBX:B4:B3
Extra
PDB:
ATOM 1 O3' C A 3 47.274 92.600 66.636 1.00118.78 O
ATOM 2 P C A 4 46.293 93.877 66.581 1.00120.01 P
ATOM 3 OP1 C A 4 47.128 95.096 66.698 1.00120.29 O
ATOM 4 OP2 C A 4 45.186 93.649 67.547 1.00119.51 O
ATOM 5 O5' C A 4 45.696 93.829 65.105 1.00120.56 O
ATOM 6 C5' C A 4 46.550 93.990 63.982 1.00121.64 C
ATOM 7 C4' C A 4 45.784 93.781 62.702 1.00122.68 C
ATOM 8 O4' C A 4 45.330 92.405 62.609 1.00122.97 O
ATOM 9 C3' C A 4 44.524 94.610 62.514 1.00123.06 C
ATOM 10 O3' C A 4 44.799 95.928 62.057 1.00123.04 O
ATOM 11 C2' C A 4 43.752 93.800 61.482 1.00123.43 C
ATOM 12 O2' C A 4 44.165 94.068 60.157 1.00123.15 O
ATOM 13 C1' C A 4 44.119 92.367 61.876 1.00123.26 C
ATOM 14 N1 C A 4 43.059 91.788 62.712 1.00123.53 N
ATOM 15 C2 C A 4 41.950 91.266 62.061 1.00123.69 C
ATOM 16 O2 C A 4 41.943 91.254 60.824 1.00123.15 O
ATOM 17 N3 C A 4 40.916 90.784 62.784 1.00124.15 N
ATOM 18 C4 C A 4 40.969 90.802 64.118 1.00124.43 C
ATOM 19 N4 C A 4 39.906 90.330 64.787 1.00124.48 N
ATOM 20 C5 C A 4 42.109 91.308 64.819 1.00124.28 C
ATOM 21 C6 C A 4 43.126 91.787 64.079 1.00123.84 C
ATOM 22 P G A 5 43.628 97.026 62.078 1.00123.00 P
ATOM 23 OP1 G A 5 44.225 98.349 61.767 1.00123.35 O
ATOM 24 OP2 G A 5 42.850 96.845 63.331 1.00123.06 O
ATOM 25 O5' G A 5 42.695 96.596 60.862 1.00121.36 O
TER
ATOM 1 O3' G B 2 48.035 88.601 71.280 1.00110.49 O
ATOM 2 P C B 3 47.512 90.099 71.016 1.00112.71 P
ATOM 3 OP1 C B 3 48.649 91.017 71.284 1.00113.00 O
ATOM 4 OP2 C B 3 46.234 90.281 71.753 1.00111.65 O
ATOM 5 O5' C B 3 47.186 90.118 69.453 1.00113.38 O
ATOM 6 C5' C B 3 48.243 90.073 68.503 1.00114.45 C
ATOM 7 C4' C B 3 47.725 90.209 67.081 1.00115.64 C
ATOM 8 O4' C B 3 47.074 88.990 66.629 1.00115.07 O
ATOM 9 C3' C B 3 46.715 91.291 66.730 1.00116.61 C
ATOM 10 O3' C B 3 47.274 92.600 66.636 1.00118.78 O
ATOM 11 C2' C B 3 46.215 90.817 65.363 1.00115.92 C
ATOM 12 O2' C B 3 47.049 91.218 64.290 1.00115.25 O
ATOM 13 C1' C B 3 46.254 89.292 65.509 1.00114.39 C
ATOM 14 N1 C B 3 44.892 88.752 65.697 1.00112.40 N
ATOM 15 C2 C B 3 44.286 88.064 64.623 1.00111.16 C
ATOM 16 O2 C B 3 44.924 87.878 63.591 1.00109.73 O
ATOM 17 N3 C B 3 43.023 87.634 64.733 1.00111.13 N
ATOM 18 C4 C B 3 42.342 87.848 65.850 1.00111.59 C
ATOM 19 N4 C B 3 41.080 87.426 65.869 1.00111.66 N
ATOM 20 C5 C B 3 42.927 88.513 66.983 1.00111.21 C
ATOM 21 C6 C B 3 44.199 88.938 66.864 1.00111.52 C
ATOM 22 P C B 4 46.293 93.877 66.581 1.00120.01 P
ATOM 23 OP1 C B 4 47.128 95.096 66.698 1.00120.29 O
ATOM 24 OP2 C B 4 45.186 93.649 67.547 1.00119.51 O
ATOM 25 O5' C B 4 45.696 93.829 65.105 1.00120.56 O
TER
ATOM 2 P C A 4 46.293 93.877 66.581 1.00120.01 P
ATOM 3 OP1 C A 4 47.128 95.096 66.698 1.00120.29 O
ATOM 4 OP2 C A 4 45.186 93.649 67.547 1.00119.51 O
ATOM 5 O5' C A 4 45.696 93.829 65.105 1.00120.56 O
ATOM 6 C5' C A 4 46.550 93.990 63.982 1.00121.64 C
ATOM 7 C4' C A 4 45.784 93.781 62.702 1.00122.68 C
ATOM 8 O4' C A 4 45.330 92.405 62.609 1.00122.97 O
ATOM 9 C3' C A 4 44.524 94.610 62.514 1.00123.06 C
ATOM 10 O3' C A 4 44.799 95.928 62.057 1.00123.04 O
ATOM 11 C2' C A 4 43.752 93.800 61.482 1.00123.43 C
ATOM 12 O2' C A 4 44.165 94.068 60.157 1.00123.15 O
ATOM 13 C1' C A 4 44.119 92.367 61.876 1.00123.26 C
ATOM 14 N1 C A 4 43.059 91.788 62.712 1.00123.53 N
ATOM 15 C2 C A 4 41.950 91.266 62.061 1.00123.69 C
ATOM 16 O2 C A 4 41.943 91.254 60.824 1.00123.15 O
ATOM 17 N3 C A 4 40.916 90.784 62.784 1.00124.15 N
ATOM 18 C4 C A 4 40.969 90.802 64.118 1.00124.43 C
ATOM 19 N4 C A 4 39.906 90.330 64.787 1.00124.48 N
ATOM 20 C5 C A 4 42.109 91.308 64.819 1.00124.28 C
ATOM 21 C6 C A 4 43.126 91.787 64.079 1.00123.84 C
ATOM 22 P G A 5 43.628 97.026 62.078 1.00123.00 P
ATOM 23 OP1 G A 5 44.225 98.349 61.767 1.00123.35 O
ATOM 24 OP2 G A 5 42.850 96.845 63.331 1.00123.06 O
ATOM 25 O5' G A 5 42.695 96.596 60.862 1.00121.36 O
TER
ATOM 1 O3' G B 2 48.035 88.601 71.280 1.00110.49 O
ATOM 2 P C B 3 47.512 90.099 71.016 1.00112.71 P
ATOM 3 OP1 C B 3 48.649 91.017 71.284 1.00113.00 O
ATOM 4 OP2 C B 3 46.234 90.281 71.753 1.00111.65 O
ATOM 5 O5' C B 3 47.186 90.118 69.453 1.00113.38 O
ATOM 6 C5' C B 3 48.243 90.073 68.503 1.00114.45 C
ATOM 7 C4' C B 3 47.725 90.209 67.081 1.00115.64 C
ATOM 8 O4' C B 3 47.074 88.990 66.629 1.00115.07 O
ATOM 9 C3' C B 3 46.715 91.291 66.730 1.00116.61 C
ATOM 10 O3' C B 3 47.274 92.600 66.636 1.00118.78 O
ATOM 11 C2' C B 3 46.215 90.817 65.363 1.00115.92 C
ATOM 12 O2' C B 3 47.049 91.218 64.290 1.00115.25 O
ATOM 13 C1' C B 3 46.254 89.292 65.509 1.00114.39 C
ATOM 14 N1 C B 3 44.892 88.752 65.697 1.00112.40 N
ATOM 15 C2 C B 3 44.286 88.064 64.623 1.00111.16 C
ATOM 16 O2 C B 3 44.924 87.878 63.591 1.00109.73 O
ATOM 17 N3 C B 3 43.023 87.634 64.733 1.00111.13 N
ATOM 18 C4 C B 3 42.342 87.848 65.850 1.00111.59 C
ATOM 19 N4 C B 3 41.080 87.426 65.869 1.00111.66 N
ATOM 20 C5 C B 3 42.927 88.513 66.983 1.00111.21 C
ATOM 21 C6 C B 3 44.199 88.938 66.864 1.00111.52 C
ATOM 22 P C B 4 46.293 93.877 66.581 1.00120.01 P
ATOM 23 OP1 C B 4 47.128 95.096 66.698 1.00120.29 O
ATOM 24 OP2 C B 4 45.186 93.649 67.547 1.00119.51 O
ATOM 25 O5' C B 4 45.696 93.829 65.105 1.00120.56 O
TER
Atoms:
C2: (41.950,91.266,62.061)
OP1: (47.128,95.096,66.698)
OP2: (45.186,93.649,67.547)
C4: (40.969,90.802,64.118)
O5': (45.696,93.829,65.105)
C3': (44.524,94.610,62.514)
C1': (44.119,92.367,61.876)
O4': (45.330,92.405,62.609)
C5': (46.550,93.990,63.982)
P: (46.293,93.877,66.581)
O2: (41.943,91.254,60.824)
C4': (45.784,93.781,62.702)
C2': (43.752,93.800,61.482)
O2': (44.165,94.068,60.157)
N1: (43.059,91.788,62.712)
N3: (40.916,90.784,62.784)
N4: (39.906,90.330,64.787)
C6: (43.126,91.787,64.079)
C5: (42.109,91.308,64.819)
O3': (44.799,95.928,62.057)
OP1: (47.128,95.096,66.698)
OP2: (45.186,93.649,67.547)
C4: (40.969,90.802,64.118)
O5': (45.696,93.829,65.105)
C3': (44.524,94.610,62.514)
C1': (44.119,92.367,61.876)
O4': (45.330,92.405,62.609)
C5': (46.550,93.990,63.982)
P: (46.293,93.877,66.581)
O2: (41.943,91.254,60.824)
C4': (45.784,93.781,62.702)
C2': (43.752,93.800,61.482)
O2': (44.165,94.068,60.157)
N1: (43.059,91.788,62.712)
N3: (40.916,90.784,62.784)
N4: (39.906,90.330,64.787)
C6: (43.126,91.787,64.079)
C5: (42.109,91.308,64.819)
O3': (44.799,95.928,62.057)
C2: (44.286,88.064,64.623)
OP1: (48.649,91.017,71.284)
OP2: (46.234,90.281,71.753)
C4: (42.342,87.848,65.850)
O5': (47.186,90.118,69.453)
C3': (46.715,91.291,66.730)
C1': (46.254,89.292,65.509)
O4': (47.074,88.990,66.629)
C5': (48.243,90.073,68.503)
P: (47.512,90.099,71.016)
O2: (44.924,87.878,63.591)
C4': (47.725,90.209,67.081)
C2': (46.215,90.817,65.363)
O2': (47.049,91.218,64.290)
N1: (44.892,88.752,65.697)
N3: (43.023,87.634,64.733)
N4: (41.080,87.426,65.869)
C6: (44.199,88.938,66.864)
C5: (42.927,88.513,66.983)
O3': (47.274,92.600,66.636)
OP1: (48.649,91.017,71.284)
OP2: (46.234,90.281,71.753)
C4: (42.342,87.848,65.850)
O5': (47.186,90.118,69.453)
C3': (46.715,91.291,66.730)
C1': (46.254,89.292,65.509)
O4': (47.074,88.990,66.629)
C5': (48.243,90.073,68.503)
P: (47.512,90.099,71.016)
O2: (44.924,87.878,63.591)
C4': (47.725,90.209,67.081)
C2': (46.215,90.817,65.363)
O2': (47.049,91.218,64.290)
N1: (44.892,88.752,65.697)
N3: (43.023,87.634,64.733)
N4: (41.080,87.426,65.869)
C6: (44.199,88.938,66.864)
C5: (42.927,88.513,66.983)
O3': (47.274,92.600,66.636)
Image (generated by PyMOL):