Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02664:02663
Extra
PDB:
ATOM 1 O3' C A2663 8.092 166.580 120.400 1.00103.36 O
ATOM 2 P C A2664 6.595 167.176 120.510 1.00105.99 P
ATOM 3 OP1 C A2664 6.005 166.764 121.813 1.00105.60 O
ATOM 4 OP2 C A2664 5.881 166.843 119.247 1.00105.96 O
ATOM 5 O5' C A2664 6.822 168.754 120.547 1.00105.99 O
ATOM 6 C5' C A2664 7.750 169.333 121.480 1.00107.23 C
ATOM 7 C4' C A2664 8.659 170.325 120.785 1.00108.55 C
ATOM 8 O4' C A2664 9.379 169.669 119.701 1.00109.45 O
ATOM 9 C3' C A2664 7.994 171.551 120.166 1.00108.20 C
ATOM 10 O3' C A2664 8.889 172.657 120.284 1.00105.90 O
ATOM 11 C2' C A2664 7.865 171.147 118.700 1.00109.15 C
ATOM 12 O2' C A2664 7.791 172.242 117.811 1.00109.23 O
ATOM 13 C1' C A2664 9.171 170.385 118.498 1.00110.08 C
ATOM 14 N1 C A2664 9.174 169.442 117.363 1.00112.64 N
ATOM 15 C2 C A2664 9.460 169.936 116.069 1.00113.81 C
ATOM 16 O2 C A2664 9.652 171.159 115.912 1.00114.02 O
ATOM 17 N3 C A2664 9.513 169.067 115.028 1.00114.51 N
ATOM 18 C4 C A2664 9.279 167.763 115.229 1.00114.55 C
ATOM 19 N4 C A2664 9.346 166.942 114.173 1.00113.94 N
ATOM 20 C5 C A2664 8.965 167.242 116.523 1.00114.10 C
ATOM 21 C6 C A2664 8.923 168.108 117.549 1.00113.38 C
ATOM 22 P G A2665 9.002 173.447 121.682 1.00104.73 P
ATOM 23 OP1 G A2665 7.625 173.596 122.227 1.00104.73 O
ATOM 24 OP2 G A2665 9.841 174.653 121.466 1.00104.60 O
ATOM 25 O5' G A2665 9.799 172.444 122.633 1.00102.38 O
TER
ATOM 1 O3' G B2662 11.671 168.449 125.138 1.00 83.44 O
ATOM 2 P C B2663 10.085 168.288 124.923 1.00 85.92 P
ATOM 3 OP1 C B2663 9.596 169.557 124.329 1.00 86.08 O
ATOM 4 OP2 C B2663 9.483 167.792 126.188 1.00 85.49 O
ATOM 5 O5' C B2663 9.953 167.132 123.836 1.00 87.42 O
ATOM 6 C5' C B2663 10.468 167.305 122.505 1.00 92.49 C
ATOM 7 C4' C B2663 10.128 166.102 121.654 1.00 96.92 C
ATOM 8 O4' C B2663 10.658 164.910 122.292 1.00 97.29 O
ATOM 9 C3' C B2663 8.646 165.802 121.472 1.00 99.69 C
ATOM 10 O3' C B2663 8.092 166.580 120.400 1.00103.36 O
ATOM 11 C2' C B2663 8.652 164.308 121.145 1.00 99.08 C
ATOM 12 O2' C B2663 8.948 164.029 119.789 1.00 99.70 O
ATOM 13 C1' C B2663 9.817 163.805 122.005 1.00 97.46 C
ATOM 14 N1 C B2663 9.451 163.128 123.267 1.00 96.67 N
ATOM 15 C2 C B2663 8.835 161.860 123.206 1.00 96.46 C
ATOM 16 O2 C B2663 8.566 161.367 122.094 1.00 95.86 O
ATOM 17 N3 C B2663 8.545 161.212 124.358 1.00 96.17 N
ATOM 18 C4 C B2663 8.831 161.778 125.534 1.00 96.18 C
ATOM 19 N4 C B2663 8.542 161.091 126.644 1.00 95.63 N
ATOM 20 C5 C B2663 9.430 163.072 125.626 1.00 95.74 C
ATOM 21 C6 C B2663 9.720 163.704 124.480 1.00 95.80 C
ATOM 22 P C B2664 6.595 167.176 120.510 1.00105.99 P
ATOM 23 OP1 C B2664 6.005 166.764 121.813 1.00105.60 O
ATOM 24 OP2 C B2664 5.881 166.843 119.247 1.00105.96 O
ATOM 25 O5' C B2664 6.822 168.754 120.547 1.00105.99 O
TER
ATOM 2 P C A2664 6.595 167.176 120.510 1.00105.99 P
ATOM 3 OP1 C A2664 6.005 166.764 121.813 1.00105.60 O
ATOM 4 OP2 C A2664 5.881 166.843 119.247 1.00105.96 O
ATOM 5 O5' C A2664 6.822 168.754 120.547 1.00105.99 O
ATOM 6 C5' C A2664 7.750 169.333 121.480 1.00107.23 C
ATOM 7 C4' C A2664 8.659 170.325 120.785 1.00108.55 C
ATOM 8 O4' C A2664 9.379 169.669 119.701 1.00109.45 O
ATOM 9 C3' C A2664 7.994 171.551 120.166 1.00108.20 C
ATOM 10 O3' C A2664 8.889 172.657 120.284 1.00105.90 O
ATOM 11 C2' C A2664 7.865 171.147 118.700 1.00109.15 C
ATOM 12 O2' C A2664 7.791 172.242 117.811 1.00109.23 O
ATOM 13 C1' C A2664 9.171 170.385 118.498 1.00110.08 C
ATOM 14 N1 C A2664 9.174 169.442 117.363 1.00112.64 N
ATOM 15 C2 C A2664 9.460 169.936 116.069 1.00113.81 C
ATOM 16 O2 C A2664 9.652 171.159 115.912 1.00114.02 O
ATOM 17 N3 C A2664 9.513 169.067 115.028 1.00114.51 N
ATOM 18 C4 C A2664 9.279 167.763 115.229 1.00114.55 C
ATOM 19 N4 C A2664 9.346 166.942 114.173 1.00113.94 N
ATOM 20 C5 C A2664 8.965 167.242 116.523 1.00114.10 C
ATOM 21 C6 C A2664 8.923 168.108 117.549 1.00113.38 C
ATOM 22 P G A2665 9.002 173.447 121.682 1.00104.73 P
ATOM 23 OP1 G A2665 7.625 173.596 122.227 1.00104.73 O
ATOM 24 OP2 G A2665 9.841 174.653 121.466 1.00104.60 O
ATOM 25 O5' G A2665 9.799 172.444 122.633 1.00102.38 O
TER
ATOM 1 O3' G B2662 11.671 168.449 125.138 1.00 83.44 O
ATOM 2 P C B2663 10.085 168.288 124.923 1.00 85.92 P
ATOM 3 OP1 C B2663 9.596 169.557 124.329 1.00 86.08 O
ATOM 4 OP2 C B2663 9.483 167.792 126.188 1.00 85.49 O
ATOM 5 O5' C B2663 9.953 167.132 123.836 1.00 87.42 O
ATOM 6 C5' C B2663 10.468 167.305 122.505 1.00 92.49 C
ATOM 7 C4' C B2663 10.128 166.102 121.654 1.00 96.92 C
ATOM 8 O4' C B2663 10.658 164.910 122.292 1.00 97.29 O
ATOM 9 C3' C B2663 8.646 165.802 121.472 1.00 99.69 C
ATOM 10 O3' C B2663 8.092 166.580 120.400 1.00103.36 O
ATOM 11 C2' C B2663 8.652 164.308 121.145 1.00 99.08 C
ATOM 12 O2' C B2663 8.948 164.029 119.789 1.00 99.70 O
ATOM 13 C1' C B2663 9.817 163.805 122.005 1.00 97.46 C
ATOM 14 N1 C B2663 9.451 163.128 123.267 1.00 96.67 N
ATOM 15 C2 C B2663 8.835 161.860 123.206 1.00 96.46 C
ATOM 16 O2 C B2663 8.566 161.367 122.094 1.00 95.86 O
ATOM 17 N3 C B2663 8.545 161.212 124.358 1.00 96.17 N
ATOM 18 C4 C B2663 8.831 161.778 125.534 1.00 96.18 C
ATOM 19 N4 C B2663 8.542 161.091 126.644 1.00 95.63 N
ATOM 20 C5 C B2663 9.430 163.072 125.626 1.00 95.74 C
ATOM 21 C6 C B2663 9.720 163.704 124.480 1.00 95.80 C
ATOM 22 P C B2664 6.595 167.176 120.510 1.00105.99 P
ATOM 23 OP1 C B2664 6.005 166.764 121.813 1.00105.60 O
ATOM 24 OP2 C B2664 5.881 166.843 119.247 1.00105.96 O
ATOM 25 O5' C B2664 6.822 168.754 120.547 1.00105.99 O
TER
Atoms:
C2: (9.460,169.936,116.069)
OP1: (6.005,166.764,121.813)
OP2: (5.881,166.843,119.247)
C4: (9.279,167.763,115.229)
O5': (6.822,168.754,120.547)
C3': (7.994,171.551,120.166)
C1': (9.171,170.385,118.498)
O4': (9.379,169.669,119.701)
C5': (7.750,169.333,121.480)
P: (6.595,167.176,120.510)
O2: (9.652,171.159,115.912)
C4': (8.659,170.325,120.785)
C2': (7.865,171.147,118.700)
O2': (7.791,172.242,117.811)
N1: (9.174,169.442,117.363)
N3: (9.513,169.067,115.028)
N4: (9.346,166.942,114.173)
C6: (8.923,168.108,117.549)
C5: (8.965,167.242,116.523)
O3': (8.889,172.657,120.284)
OP1: (6.005,166.764,121.813)
OP2: (5.881,166.843,119.247)
C4: (9.279,167.763,115.229)
O5': (6.822,168.754,120.547)
C3': (7.994,171.551,120.166)
C1': (9.171,170.385,118.498)
O4': (9.379,169.669,119.701)
C5': (7.750,169.333,121.480)
P: (6.595,167.176,120.510)
O2: (9.652,171.159,115.912)
C4': (8.659,170.325,120.785)
C2': (7.865,171.147,118.700)
O2': (7.791,172.242,117.811)
N1: (9.174,169.442,117.363)
N3: (9.513,169.067,115.028)
N4: (9.346,166.942,114.173)
C6: (8.923,168.108,117.549)
C5: (8.965,167.242,116.523)
O3': (8.889,172.657,120.284)
C2: (8.835,161.860,123.206)
OP1: (9.596,169.557,124.329)
OP2: (9.483,167.792,126.188)
C4: (8.831,161.778,125.534)
O5': (9.953,167.132,123.836)
C3': (8.646,165.802,121.472)
C1': (9.817,163.805,122.005)
O4': (10.658,164.910,122.292)
C5': (10.468,167.305,122.505)
P: (10.085,168.288,124.923)
O2: (8.566,161.367,122.094)
C4': (10.128,166.102,121.654)
C2': (8.652,164.308,121.145)
O2': (8.948,164.029,119.789)
N1: (9.451,163.128,123.267)
N3: (8.545,161.212,124.358)
N4: (8.542,161.091,126.644)
C6: (9.720,163.704,124.480)
C5: (9.430,163.072,125.626)
O3': (8.092,166.580,120.400)
OP1: (9.596,169.557,124.329)
OP2: (9.483,167.792,126.188)
C4: (8.831,161.778,125.534)
O5': (9.953,167.132,123.836)
C3': (8.646,165.802,121.472)
C1': (9.817,163.805,122.005)
O4': (10.658,164.910,122.292)
C5': (10.468,167.305,122.505)
P: (10.085,168.288,124.923)
O2: (8.566,161.367,122.094)
C4': (10.128,166.102,121.654)
C2': (8.652,164.308,121.145)
O2': (8.948,164.029,119.789)
N1: (9.451,163.128,123.267)
N3: (8.545,161.212,124.358)
N4: (8.542,161.091,126.644)
C6: (9.720,163.704,124.480)
C5: (9.430,163.072,125.626)
O3': (8.092,166.580,120.400)
Image (generated by PyMOL):