Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1239:A1238
Extra
PDB:
ATOM 1 O3' C A1238 -23.743 -74.676 4.763 1.00 8.40 O
ATOM 2 P C A1239 -22.950 -73.654 3.823 1.00 34.81 P
ATOM 3 OP1 C A1239 -22.720 -72.412 4.589 1.00 28.02 O
ATOM 4 OP2 C A1239 -23.696 -73.593 2.540 1.00 28.02 O
ATOM 5 O5' C A1239 -21.538 -74.360 3.627 1.00 20.29 O
ATOM 6 C5' C A1239 -20.616 -74.478 4.737 1.00 20.29 C
ATOM 7 C4' C A1239 -19.283 -74.996 4.260 1.00 20.29 C
ATOM 8 O4' C A1239 -19.401 -76.395 3.890 1.00 20.29 O
ATOM 9 C3' C A1239 -18.779 -74.296 3.016 1.00 20.29 C
ATOM 10 O3' C A1239 -18.058 -73.136 3.365 1.00 20.29 O
ATOM 11 C2' C A1239 -17.920 -75.358 2.340 1.00 20.29 C
ATOM 12 O2' C A1239 -16.618 -75.445 2.879 1.00 20.29 O
ATOM 13 C1' C A1239 -18.687 -76.634 2.687 1.00 20.29 C
ATOM 14 N1 C A1239 -19.660 -77.033 1.649 1.00 38.39 N
ATOM 15 C2 C A1239 -19.211 -77.719 0.525 1.00 38.39 C
ATOM 16 O2 C A1239 -17.994 -77.932 0.397 1.00 38.39 O
ATOM 17 N3 C A1239 -20.109 -78.127 -0.398 1.00 38.39 N
ATOM 18 C4 C A1239 -21.402 -77.858 -0.232 1.00 38.39 C
ATOM 19 N4 C A1239 -22.257 -78.295 -1.152 1.00 38.39 N
ATOM 20 C5 C A1239 -21.879 -77.136 0.886 1.00 38.39 C
ATOM 21 C6 C A1239 -20.988 -76.747 1.793 1.00 38.39 C
ATOM 22 P C A1240 -17.856 -71.981 2.273 1.00 38.54 P
ATOM 23 OP1 C A1240 -16.962 -70.970 2.882 1.00 25.18 O
ATOM 24 OP2 C A1240 -19.173 -71.585 1.706 1.00 25.18 O
ATOM 25 O5' C A1240 -17.011 -72.680 1.131 1.00 20.20 O
TER
ATOM 1 O3' U B1237 -29.325 -75.727 2.142 1.00 2.45 O
ATOM 2 P C B1238 -27.958 -74.901 2.353 1.00 18.90 P
ATOM 3 OP1 C B1238 -28.293 -73.751 3.209 1.00 23.60 O
ATOM 4 OP2 C B1238 -27.311 -74.662 1.049 1.00 23.60 O
ATOM 5 O5' C B1238 -27.005 -75.869 3.176 1.00 8.40 O
ATOM 6 C5' C B1238 -26.821 -75.707 4.601 1.00 8.40 C
ATOM 7 C4' C B1238 -25.493 -76.298 5.035 1.00 8.40 C
ATOM 8 O4' C B1238 -25.529 -77.735 4.889 1.00 8.40 O
ATOM 9 C3' C B1238 -24.317 -75.836 4.197 1.00 8.40 C
ATOM 10 O3' C B1238 -23.743 -74.676 4.763 1.00 8.40 O
ATOM 11 C2' C B1238 -23.349 -76.997 4.269 1.00 8.40 C
ATOM 12 O2' C B1238 -22.558 -76.917 5.422 1.00 8.40 O
ATOM 13 C1' C B1238 -24.296 -78.195 4.362 1.00 8.40 C
ATOM 14 N1 C B1238 -24.558 -78.851 3.061 1.00 32.96 N
ATOM 15 C2 C B1238 -23.503 -79.458 2.379 1.00 32.96 C
ATOM 16 O2 C B1238 -22.368 -79.477 2.896 1.00 32.96 O
ATOM 17 N3 C B1238 -23.743 -80.016 1.176 1.00 32.96 N
ATOM 18 C4 C B1238 -24.971 -79.992 0.660 1.00 32.96 C
ATOM 19 N4 C B1238 -25.156 -80.528 -0.537 1.00 32.96 N
ATOM 20 C5 C B1238 -26.059 -79.412 1.340 1.00 32.96 C
ATOM 21 C6 C B1238 -25.814 -78.857 2.523 1.00 32.96 C
ATOM 22 P C B1239 -22.950 -73.654 3.823 1.00 34.81 P
ATOM 23 OP1 C B1239 -22.720 -72.412 4.589 1.00 28.02 O
ATOM 24 OP2 C B1239 -23.696 -73.593 2.540 1.00 28.02 O
ATOM 25 O5' C B1239 -21.538 -74.360 3.627 1.00 20.29 O
TER
ATOM 2 P C A1239 -22.950 -73.654 3.823 1.00 34.81 P
ATOM 3 OP1 C A1239 -22.720 -72.412 4.589 1.00 28.02 O
ATOM 4 OP2 C A1239 -23.696 -73.593 2.540 1.00 28.02 O
ATOM 5 O5' C A1239 -21.538 -74.360 3.627 1.00 20.29 O
ATOM 6 C5' C A1239 -20.616 -74.478 4.737 1.00 20.29 C
ATOM 7 C4' C A1239 -19.283 -74.996 4.260 1.00 20.29 C
ATOM 8 O4' C A1239 -19.401 -76.395 3.890 1.00 20.29 O
ATOM 9 C3' C A1239 -18.779 -74.296 3.016 1.00 20.29 C
ATOM 10 O3' C A1239 -18.058 -73.136 3.365 1.00 20.29 O
ATOM 11 C2' C A1239 -17.920 -75.358 2.340 1.00 20.29 C
ATOM 12 O2' C A1239 -16.618 -75.445 2.879 1.00 20.29 O
ATOM 13 C1' C A1239 -18.687 -76.634 2.687 1.00 20.29 C
ATOM 14 N1 C A1239 -19.660 -77.033 1.649 1.00 38.39 N
ATOM 15 C2 C A1239 -19.211 -77.719 0.525 1.00 38.39 C
ATOM 16 O2 C A1239 -17.994 -77.932 0.397 1.00 38.39 O
ATOM 17 N3 C A1239 -20.109 -78.127 -0.398 1.00 38.39 N
ATOM 18 C4 C A1239 -21.402 -77.858 -0.232 1.00 38.39 C
ATOM 19 N4 C A1239 -22.257 -78.295 -1.152 1.00 38.39 N
ATOM 20 C5 C A1239 -21.879 -77.136 0.886 1.00 38.39 C
ATOM 21 C6 C A1239 -20.988 -76.747 1.793 1.00 38.39 C
ATOM 22 P C A1240 -17.856 -71.981 2.273 1.00 38.54 P
ATOM 23 OP1 C A1240 -16.962 -70.970 2.882 1.00 25.18 O
ATOM 24 OP2 C A1240 -19.173 -71.585 1.706 1.00 25.18 O
ATOM 25 O5' C A1240 -17.011 -72.680 1.131 1.00 20.20 O
TER
ATOM 1 O3' U B1237 -29.325 -75.727 2.142 1.00 2.45 O
ATOM 2 P C B1238 -27.958 -74.901 2.353 1.00 18.90 P
ATOM 3 OP1 C B1238 -28.293 -73.751 3.209 1.00 23.60 O
ATOM 4 OP2 C B1238 -27.311 -74.662 1.049 1.00 23.60 O
ATOM 5 O5' C B1238 -27.005 -75.869 3.176 1.00 8.40 O
ATOM 6 C5' C B1238 -26.821 -75.707 4.601 1.00 8.40 C
ATOM 7 C4' C B1238 -25.493 -76.298 5.035 1.00 8.40 C
ATOM 8 O4' C B1238 -25.529 -77.735 4.889 1.00 8.40 O
ATOM 9 C3' C B1238 -24.317 -75.836 4.197 1.00 8.40 C
ATOM 10 O3' C B1238 -23.743 -74.676 4.763 1.00 8.40 O
ATOM 11 C2' C B1238 -23.349 -76.997 4.269 1.00 8.40 C
ATOM 12 O2' C B1238 -22.558 -76.917 5.422 1.00 8.40 O
ATOM 13 C1' C B1238 -24.296 -78.195 4.362 1.00 8.40 C
ATOM 14 N1 C B1238 -24.558 -78.851 3.061 1.00 32.96 N
ATOM 15 C2 C B1238 -23.503 -79.458 2.379 1.00 32.96 C
ATOM 16 O2 C B1238 -22.368 -79.477 2.896 1.00 32.96 O
ATOM 17 N3 C B1238 -23.743 -80.016 1.176 1.00 32.96 N
ATOM 18 C4 C B1238 -24.971 -79.992 0.660 1.00 32.96 C
ATOM 19 N4 C B1238 -25.156 -80.528 -0.537 1.00 32.96 N
ATOM 20 C5 C B1238 -26.059 -79.412 1.340 1.00 32.96 C
ATOM 21 C6 C B1238 -25.814 -78.857 2.523 1.00 32.96 C
ATOM 22 P C B1239 -22.950 -73.654 3.823 1.00 34.81 P
ATOM 23 OP1 C B1239 -22.720 -72.412 4.589 1.00 28.02 O
ATOM 24 OP2 C B1239 -23.696 -73.593 2.540 1.00 28.02 O
ATOM 25 O5' C B1239 -21.538 -74.360 3.627 1.00 20.29 O
TER
Atoms:
C2: (-19.211,-77.719,0.525)
OP1: (-22.720,-72.412,4.589)
OP2: (-23.696,-73.593,2.540)
C4: (-21.402,-77.858,-0.232)
O5': (-21.538,-74.360,3.627)
C3': (-18.779,-74.296,3.016)
C1': (-18.687,-76.634,2.687)
O4': (-19.401,-76.395,3.890)
C5': (-20.616,-74.478,4.737)
P: (-22.950,-73.654,3.823)
O2: (-17.994,-77.932,0.397)
C4': (-19.283,-74.996,4.260)
C2': (-17.920,-75.358,2.340)
O2': (-16.618,-75.445,2.879)
N1: (-19.660,-77.033,1.649)
N3: (-20.109,-78.127,-0.398)
N4: (-22.257,-78.295,-1.152)
C6: (-20.988,-76.747,1.793)
C5: (-21.879,-77.136,0.886)
O3': (-18.058,-73.136,3.365)
OP1: (-22.720,-72.412,4.589)
OP2: (-23.696,-73.593,2.540)
C4: (-21.402,-77.858,-0.232)
O5': (-21.538,-74.360,3.627)
C3': (-18.779,-74.296,3.016)
C1': (-18.687,-76.634,2.687)
O4': (-19.401,-76.395,3.890)
C5': (-20.616,-74.478,4.737)
P: (-22.950,-73.654,3.823)
O2: (-17.994,-77.932,0.397)
C4': (-19.283,-74.996,4.260)
C2': (-17.920,-75.358,2.340)
O2': (-16.618,-75.445,2.879)
N1: (-19.660,-77.033,1.649)
N3: (-20.109,-78.127,-0.398)
N4: (-22.257,-78.295,-1.152)
C6: (-20.988,-76.747,1.793)
C5: (-21.879,-77.136,0.886)
O3': (-18.058,-73.136,3.365)
C2: (-23.503,-79.458,2.379)
OP1: (-28.293,-73.751,3.209)
OP2: (-27.311,-74.662,1.049)
C4: (-24.971,-79.992,0.660)
O5': (-27.005,-75.869,3.176)
C3': (-24.317,-75.836,4.197)
C1': (-24.296,-78.195,4.362)
O4': (-25.529,-77.735,4.889)
C5': (-26.821,-75.707,4.601)
P: (-27.958,-74.901,2.353)
O2: (-22.368,-79.477,2.896)
C4': (-25.493,-76.298,5.035)
C2': (-23.349,-76.997,4.269)
O2': (-22.558,-76.917,5.422)
N1: (-24.558,-78.851,3.061)
N3: (-23.743,-80.016,1.176)
N4: (-25.156,-80.528,-0.537)
C6: (-25.814,-78.857,2.523)
C5: (-26.059,-79.412,1.340)
O3': (-23.743,-74.676,4.763)
OP1: (-28.293,-73.751,3.209)
OP2: (-27.311,-74.662,1.049)
C4: (-24.971,-79.992,0.660)
O5': (-27.005,-75.869,3.176)
C3': (-24.317,-75.836,4.197)
C1': (-24.296,-78.195,4.362)
O4': (-25.529,-77.735,4.889)
C5': (-26.821,-75.707,4.601)
P: (-27.958,-74.901,2.353)
O2: (-22.368,-79.477,2.896)
C4': (-25.493,-76.298,5.035)
C2': (-23.349,-76.997,4.269)
O2': (-22.558,-76.917,5.422)
N1: (-24.558,-78.851,3.061)
N3: (-23.743,-80.016,1.176)
N4: (-25.156,-80.528,-0.537)
C6: (-25.814,-78.857,2.523)
C5: (-26.059,-79.412,1.340)
O3': (-23.743,-74.676,4.763)
Image (generated by PyMOL):