ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:0474:0499

Extra

PDB:
ATOM 1 O3' A A 473 24.171 161.555 48.910 1.00 45.73 O
ATOM 2 P A A 474 23.486 162.523 47.814 1.00 45.84 P
ATOM 3 OP1 A A 474 23.410 161.816 46.510 1.00 43.28 O
ATOM 4 OP2 A A 474 24.157 163.843 47.887 1.00 48.91 O
ATOM 5 O5' A A 474 22.019 162.738 48.406 1.00 43.27 O
ATOM 6 C5' A A 474 21.128 161.622 48.563 1.00 43.81 C
ATOM 7 C4' A A 474 20.036 161.931 49.559 1.00 43.44 C
ATOM 8 O4' A A 474 19.054 160.859 49.495 1.00 44.78 O
ATOM 9 C3' A A 474 20.446 162.014 51.026 1.00 44.48 C
ATOM 10 O3' A A 474 20.878 163.339 51.370 1.00 45.15 O
ATOM 11 C2' A A 474 19.158 161.601 51.742 1.00 45.10 C
ATOM 12 O2' A A 474 18.204 162.633 51.824 1.00 45.81 O
ATOM 13 C1' A A 474 18.617 160.520 50.801 1.00 44.68 C
ATOM 14 N9 A A 474 19.124 159.181 51.119 1.00 43.74 N
ATOM 15 C8 A A 474 19.991 158.419 50.375 1.00 42.19 C
ATOM 16 N7 A A 474 20.308 157.280 50.936 1.00 43.48 N
ATOM 17 C5 A A 474 19.597 157.287 52.127 1.00 42.74 C
ATOM 18 C6 A A 474 19.527 156.367 53.191 1.00 43.63 C
ATOM 19 N6 A A 474 20.220 155.223 53.222 1.00 44.65 N
ATOM 20 N1 A A 474 18.719 156.666 54.231 1.00 41.57 N
ATOM 21 C2 A A 474 18.041 157.821 54.198 1.00 41.51 C
ATOM 22 N3 A A 474 18.037 158.772 53.263 1.00 41.37 N
ATOM 23 C4 A A 474 18.847 158.440 52.243 1.00 41.76 C
ATOM 24 P G A 475 21.491 163.658 52.837 1.00 45.96 P
ATOM 25 OP1 G A 475 20.998 162.678 53.835 1.00 49.05 O
ATOM 26 OP2 G A 475 21.276 165.105 53.086 1.00 45.88 O
ATOM 27 O5' G A 475 23.058 163.446 52.655 1.00 43.59 O
TER

ATOM 1 O3' U B 498 18.843 148.979 65.421 1.00 62.09 O
ATOM 2 P A B 499 18.408 148.862 63.878 1.00 57.45 P
ATOM 3 OP1 A B 499 17.563 150.029 63.529 1.00 59.27 O
ATOM 4 OP2 A B 499 17.878 147.493 63.679 1.00 59.55 O
ATOM 5 O5' A B 499 19.780 148.976 63.080 1.00 53.42 O
ATOM 6 C5' A B 499 20.503 150.215 63.026 1.00 48.90 C
ATOM 7 C4' A B 499 21.455 150.208 61.857 1.00 46.68 C
ATOM 8 O4' A B 499 20.719 149.980 60.626 1.00 46.03 O
ATOM 9 C3' A B 499 22.182 151.519 61.613 1.00 45.78 C
ATOM 10 O3' A B 499 23.314 151.633 62.460 1.00 45.44 O
ATOM 11 C2' A B 499 22.556 151.405 60.141 1.00 45.73 C
ATOM 12 O2' A B 499 23.661 150.560 59.900 1.00 46.98 O
ATOM 13 C1' A B 499 21.307 150.730 59.574 1.00 44.98 C
ATOM 14 N9 A B 499 20.327 151.705 59.094 1.00 43.40 N
ATOM 15 C8 A B 499 19.148 152.103 59.682 1.00 42.29 C
ATOM 16 N7 A B 499 18.499 153.017 59.000 1.00 41.99 N
ATOM 17 C5 A B 499 19.302 153.233 57.889 1.00 44.10 C
ATOM 18 C6 A B 499 19.171 154.082 56.773 1.00 43.09 C
ATOM 19 N6 A B 499 18.139 154.902 56.581 1.00 45.37 N
ATOM 20 N1 A B 499 20.149 154.053 55.844 1.00 43.75 N
ATOM 21 C2 A B 499 21.181 153.222 56.025 1.00 42.85 C
ATOM 22 N3 A B 499 21.416 152.374 57.025 1.00 43.36 N
ATOM 23 C4 A B 499 20.429 152.429 57.934 1.00 42.97 C
ATOM 24 P G B 500 23.504 152.942 63.368 1.00 45.10 P
ATOM 25 OP1 G B 500 24.665 152.655 64.250 1.00 45.27 O
ATOM 26 OP2 G B 500 22.208 153.334 63.971 1.00 42.58 O
ATOM 27 O5' G B 500 23.920 154.073 62.325 1.00 44.96 O
TER

Atoms:
OP1: (23.410,161.816,46.510)
OP2: (24.157,163.843,47.887)
C3': (20.446,162.014,51.026)
C1': (18.617,160.520,50.801)
C5': (21.128,161.622,48.563)
O4': (19.054,160.859,49.495)
C8: (19.991,158.419,50.375)
O2': (18.204,162.633,51.824)
C6: (19.527,156.367,53.191)
C5: (19.597,157.287,52.127)
C4: (18.847,158.440,52.243)
P: (23.486,162.523,47.814)
C4': (20.036,161.931,49.559)
C2': (19.158,161.601,51.742)
C2: (18.041,157.821,54.198)
N1: (18.719,156.666,54.231)
N3: (18.037,158.772,53.263)
N6: (20.220,155.223,53.222)
N7: (20.308,157.280,50.936)
N9: (19.124,159.181,51.119)
O5': (22.019,162.738,48.406)
O3': (20.878,163.339,51.370)
OP1: (17.563,150.029,63.529)
OP2: (17.878,147.493,63.679)
C3': (22.182,151.519,61.613)
C1': (21.307,150.730,59.574)
C5': (20.503,150.215,63.026)
O4': (20.719,149.980,60.626)
C8: (19.148,152.103,59.682)
O2': (23.661,150.560,59.900)
C6: (19.171,154.082,56.773)
C5: (19.302,153.233,57.889)
C4: (20.429,152.429,57.934)
P: (18.408,148.862,63.878)
C4': (21.455,150.208,61.857)
C2': (22.556,151.405,60.141)
C2: (21.181,153.222,56.025)
N1: (20.149,154.053,55.844)
N3: (21.416,152.374,57.025)
N6: (18.139,154.902,56.581)
N7: (18.499,153.017,59.000)
N9: (20.327,151.705,59.094)
O5': (19.780,148.976,63.080)
O3': (23.314,151.633,62.460)
Image (generated by PyMOL):
PyMOL image
show in jmol