Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A500:A499
Extra
PDB:
ATOM 1 O3' C A 499 23.964-109.403 -16.888 1.00 53.14 O
ATOM 2 P C A 500 24.225-108.262 -15.789 1.00 52.73 P
ATOM 3 OP1 C A 500 23.200-108.437 -14.723 1.00 49.82 O
ATOM 4 OP2 C A 500 24.346-106.956 -16.489 1.00 47.37 O
ATOM 5 O5' C A 500 25.654-108.631 -15.187 1.00 58.30 O
ATOM 6 C5' C A 500 25.863-109.860 -14.490 1.00 58.53 C
ATOM 7 C4' C A 500 27.297-109.958 -14.037 1.00 57.13 C
ATOM 8 O4' C A 500 28.153-110.184 -15.185 1.00 59.12 O
ATOM 9 C3' C A 500 27.819-108.677 -13.409 1.00 63.84 C
ATOM 10 O3' C A 500 27.523-108.605 -12.025 1.00 63.41 O
ATOM 11 C2' C A 500 29.310-108.718 -13.704 1.00 63.91 C
ATOM 12 O2' C A 500 30.058-109.492 -12.799 1.00 63.84 O
ATOM 13 C1' C A 500 29.331-109.396 -15.071 1.00 63.64 C
ATOM 14 N1 C A 500 29.326-108.390 -16.150 1.00 64.62 N
ATOM 15 C2 C A 500 30.522-107.740 -16.494 1.00 59.41 C
ATOM 16 O2 C A 500 31.563-108.028 -15.896 1.00 60.59 O
ATOM 17 N3 C A 500 30.508-106.813 -17.468 1.00 57.82 N
ATOM 18 C4 C A 500 29.365-106.522 -18.092 1.00 60.52 C
ATOM 19 N4 C A 500 29.387-105.596 -19.054 1.00 63.11 N
ATOM 20 C5 C A 500 28.143-107.165 -17.764 1.00 64.54 C
ATOM 21 C6 C A 500 28.168-108.083 -16.801 1.00 62.96 C
ATOM 22 P C A 501 26.907-107.258 -11.423 1.00 61.99 P
ATOM 23 OP1 C A 501 26.106-107.655 -10.237 1.00 63.91 O
ATOM 24 OP2 C A 501 26.258-106.524 -12.543 1.00 60.93 O
ATOM 25 O5' C A 501 28.184-106.432 -10.953 1.00 61.75 O
TER
ATOM 1 O3' C B 498 22.661-108.677 -22.931 1.00 66.40 O
ATOM 2 P C B 499 22.716-107.597 -21.743 1.00 68.58 P
ATOM 3 OP1 C B 499 21.325-107.352 -21.295 1.00 59.23 O
ATOM 4 OP2 C B 499 23.567-106.454 -22.178 1.00 63.08 O
ATOM 5 O5' C B 499 23.484-108.339 -20.563 1.00 53.33 O
ATOM 6 C5' C B 499 22.921-109.484 -19.951 1.00 54.11 C
ATOM 7 C4' C B 499 23.975-110.214 -19.167 1.00 61.07 C
ATOM 8 O4' C B 499 25.012-110.661 -20.073 1.00 54.91 O
ATOM 9 C3' C B 499 24.697-109.394 -18.111 1.00 55.80 C
ATOM 10 O3' C B 499 23.964-109.403 -16.888 1.00 53.14 O
ATOM 11 C2' C B 499 26.027-110.123 -17.988 1.00 52.00 C
ATOM 12 O2' C B 499 25.922-111.249 -17.147 1.00 53.58 O
ATOM 13 C1' C B 499 26.266-110.598 -19.422 1.00 54.01 C
ATOM 14 N1 C B 499 27.145-109.707 -20.202 1.00 55.47 N
ATOM 15 C2 C B 499 28.500-109.642 -19.894 1.00 56.33 C
ATOM 16 O2 C B 499 28.940-110.326 -18.978 1.00 56.36 O
ATOM 17 N3 C B 499 29.293-108.831 -20.603 1.00 60.13 N
ATOM 18 C4 C B 499 28.785-108.102 -21.593 1.00 62.07 C
ATOM 19 N4 C B 499 29.603-107.312 -22.267 1.00 71.28 N
ATOM 20 C5 C B 499 27.414-108.151 -21.934 1.00 58.92 C
ATOM 21 C6 C B 499 26.635-108.955 -21.221 1.00 56.72 C
ATOM 22 P C B 500 24.225-108.262 -15.789 1.00 52.73 P
ATOM 23 OP1 C B 500 23.200-108.437 -14.723 1.00 49.82 O
ATOM 24 OP2 C B 500 24.346-106.956 -16.489 1.00 47.37 O
ATOM 25 O5' C B 500 25.654-108.631 -15.187 1.00 58.30 O
TER
ATOM 2 P C A 500 24.225-108.262 -15.789 1.00 52.73 P
ATOM 3 OP1 C A 500 23.200-108.437 -14.723 1.00 49.82 O
ATOM 4 OP2 C A 500 24.346-106.956 -16.489 1.00 47.37 O
ATOM 5 O5' C A 500 25.654-108.631 -15.187 1.00 58.30 O
ATOM 6 C5' C A 500 25.863-109.860 -14.490 1.00 58.53 C
ATOM 7 C4' C A 500 27.297-109.958 -14.037 1.00 57.13 C
ATOM 8 O4' C A 500 28.153-110.184 -15.185 1.00 59.12 O
ATOM 9 C3' C A 500 27.819-108.677 -13.409 1.00 63.84 C
ATOM 10 O3' C A 500 27.523-108.605 -12.025 1.00 63.41 O
ATOM 11 C2' C A 500 29.310-108.718 -13.704 1.00 63.91 C
ATOM 12 O2' C A 500 30.058-109.492 -12.799 1.00 63.84 O
ATOM 13 C1' C A 500 29.331-109.396 -15.071 1.00 63.64 C
ATOM 14 N1 C A 500 29.326-108.390 -16.150 1.00 64.62 N
ATOM 15 C2 C A 500 30.522-107.740 -16.494 1.00 59.41 C
ATOM 16 O2 C A 500 31.563-108.028 -15.896 1.00 60.59 O
ATOM 17 N3 C A 500 30.508-106.813 -17.468 1.00 57.82 N
ATOM 18 C4 C A 500 29.365-106.522 -18.092 1.00 60.52 C
ATOM 19 N4 C A 500 29.387-105.596 -19.054 1.00 63.11 N
ATOM 20 C5 C A 500 28.143-107.165 -17.764 1.00 64.54 C
ATOM 21 C6 C A 500 28.168-108.083 -16.801 1.00 62.96 C
ATOM 22 P C A 501 26.907-107.258 -11.423 1.00 61.99 P
ATOM 23 OP1 C A 501 26.106-107.655 -10.237 1.00 63.91 O
ATOM 24 OP2 C A 501 26.258-106.524 -12.543 1.00 60.93 O
ATOM 25 O5' C A 501 28.184-106.432 -10.953 1.00 61.75 O
TER
ATOM 1 O3' C B 498 22.661-108.677 -22.931 1.00 66.40 O
ATOM 2 P C B 499 22.716-107.597 -21.743 1.00 68.58 P
ATOM 3 OP1 C B 499 21.325-107.352 -21.295 1.00 59.23 O
ATOM 4 OP2 C B 499 23.567-106.454 -22.178 1.00 63.08 O
ATOM 5 O5' C B 499 23.484-108.339 -20.563 1.00 53.33 O
ATOM 6 C5' C B 499 22.921-109.484 -19.951 1.00 54.11 C
ATOM 7 C4' C B 499 23.975-110.214 -19.167 1.00 61.07 C
ATOM 8 O4' C B 499 25.012-110.661 -20.073 1.00 54.91 O
ATOM 9 C3' C B 499 24.697-109.394 -18.111 1.00 55.80 C
ATOM 10 O3' C B 499 23.964-109.403 -16.888 1.00 53.14 O
ATOM 11 C2' C B 499 26.027-110.123 -17.988 1.00 52.00 C
ATOM 12 O2' C B 499 25.922-111.249 -17.147 1.00 53.58 O
ATOM 13 C1' C B 499 26.266-110.598 -19.422 1.00 54.01 C
ATOM 14 N1 C B 499 27.145-109.707 -20.202 1.00 55.47 N
ATOM 15 C2 C B 499 28.500-109.642 -19.894 1.00 56.33 C
ATOM 16 O2 C B 499 28.940-110.326 -18.978 1.00 56.36 O
ATOM 17 N3 C B 499 29.293-108.831 -20.603 1.00 60.13 N
ATOM 18 C4 C B 499 28.785-108.102 -21.593 1.00 62.07 C
ATOM 19 N4 C B 499 29.603-107.312 -22.267 1.00 71.28 N
ATOM 20 C5 C B 499 27.414-108.151 -21.934 1.00 58.92 C
ATOM 21 C6 C B 499 26.635-108.955 -21.221 1.00 56.72 C
ATOM 22 P C B 500 24.225-108.262 -15.789 1.00 52.73 P
ATOM 23 OP1 C B 500 23.200-108.437 -14.723 1.00 49.82 O
ATOM 24 OP2 C B 500 24.346-106.956 -16.489 1.00 47.37 O
ATOM 25 O5' C B 500 25.654-108.631 -15.187 1.00 58.30 O
TER
Atoms:
C2: (30.522,-107.740,-16.494)
OP1: (23.200,-108.437,-14.723)
OP2: (24.346,-106.956,-16.489)
C4: (29.365,-106.522,-18.092)
O5': (25.654,-108.631,-15.187)
C3': (27.819,-108.677,-13.409)
C1': (29.331,-109.396,-15.071)
O4': (28.153,-110.184,-15.185)
C5': (25.863,-109.860,-14.490)
P: (24.225,-108.262,-15.789)
O2: (31.563,-108.028,-15.896)
C4': (27.297,-109.958,-14.037)
C2': (29.310,-108.718,-13.704)
O2': (30.058,-109.492,-12.799)
N1: (29.326,-108.390,-16.150)
N3: (30.508,-106.813,-17.468)
N4: (29.387,-105.596,-19.054)
C6: (28.168,-108.083,-16.801)
C5: (28.143,-107.165,-17.764)
O3': (27.523,-108.605,-12.025)
OP1: (23.200,-108.437,-14.723)
OP2: (24.346,-106.956,-16.489)
C4: (29.365,-106.522,-18.092)
O5': (25.654,-108.631,-15.187)
C3': (27.819,-108.677,-13.409)
C1': (29.331,-109.396,-15.071)
O4': (28.153,-110.184,-15.185)
C5': (25.863,-109.860,-14.490)
P: (24.225,-108.262,-15.789)
O2: (31.563,-108.028,-15.896)
C4': (27.297,-109.958,-14.037)
C2': (29.310,-108.718,-13.704)
O2': (30.058,-109.492,-12.799)
N1: (29.326,-108.390,-16.150)
N3: (30.508,-106.813,-17.468)
N4: (29.387,-105.596,-19.054)
C6: (28.168,-108.083,-16.801)
C5: (28.143,-107.165,-17.764)
O3': (27.523,-108.605,-12.025)
C2: (28.500,-109.642,-19.894)
OP1: (21.325,-107.352,-21.295)
OP2: (23.567,-106.454,-22.178)
C4: (28.785,-108.102,-21.593)
O5': (23.484,-108.339,-20.563)
C3': (24.697,-109.394,-18.111)
C1': (26.266,-110.598,-19.422)
O4': (25.012,-110.661,-20.073)
C5': (22.921,-109.484,-19.951)
P: (22.716,-107.597,-21.743)
O2: (28.940,-110.326,-18.978)
C4': (23.975,-110.214,-19.167)
C2': (26.027,-110.123,-17.988)
O2': (25.922,-111.249,-17.147)
N1: (27.145,-109.707,-20.202)
N3: (29.293,-108.831,-20.603)
N4: (29.603,-107.312,-22.267)
C6: (26.635,-108.955,-21.221)
C5: (27.414,-108.151,-21.934)
O3': (23.964,-109.403,-16.888)
OP1: (21.325,-107.352,-21.295)
OP2: (23.567,-106.454,-22.178)
C4: (28.785,-108.102,-21.593)
O5': (23.484,-108.339,-20.563)
C3': (24.697,-109.394,-18.111)
C1': (26.266,-110.598,-19.422)
O4': (25.012,-110.661,-20.073)
C5': (22.921,-109.484,-19.951)
P: (22.716,-107.597,-21.743)
O2: (28.940,-110.326,-18.978)
C4': (23.975,-110.214,-19.167)
C2': (26.027,-110.123,-17.988)
O2': (25.922,-111.249,-17.147)
N1: (27.145,-109.707,-20.202)
N3: (29.293,-108.831,-20.603)
N4: (29.603,-107.312,-22.267)
C6: (26.635,-108.955,-21.221)
C5: (27.414,-108.151,-21.934)
O3': (23.964,-109.403,-16.888)
Image (generated by PyMOL):