Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3NDB:M9:M8
Extra
PDB:
ATOM 1 O3' C A 8 -28.882 31.875-114.634 1.00191.34 O
ATOM 2 P C A 9 -29.456 31.933-113.148 1.00184.43 P
ATOM 3 OP1 C A 9 -28.628 31.141-112.216 1.00192.07 O
ATOM 4 OP2 C A 9 -30.858 31.478-113.085 1.00171.00 O
ATOM 5 O5' C A 9 -29.357 33.498-112.804 1.00187.34 O
ATOM 6 C5' C A 9 -29.227 34.426-113.902 1.00189.74 C
ATOM 7 C4' C A 9 -30.529 35.110-114.240 1.00178.80 C
ATOM 8 O4' C A 9 -31.206 34.409-115.337 1.00170.45 O
ATOM 9 C3' C A 9 -31.638 35.006-113.209 1.00170.05 C
ATOM 10 O3' C A 9 -31.336 35.670-112.007 1.00176.61 O
ATOM 11 C2' C A 9 -32.815 35.559-114.019 1.00164.05 C
ATOM 12 O2' C A 9 -32.735 36.954-114.258 1.00171.00 O
ATOM 13 C1' C A 9 -32.605 34.710-115.315 1.00161.51 C
ATOM 14 N1 C A 9 -33.400 33.468-115.387 1.00153.78 N
ATOM 15 C2 C A 9 -34.731 33.518-115.594 1.00148.80 C
ATOM 16 O2 C A 9 -35.242 34.637-115.717 1.00149.84 O
ATOM 17 N3 C A 9 -35.467 32.352-115.662 1.00145.87 N
ATOM 18 C4 C A 9 -34.872 31.174-115.528 1.00147.15 C
ATOM 19 N4 C A 9 -35.638 30.089-115.597 1.00146.11 N
ATOM 20 C5 C A 9 -33.459 31.095-115.321 1.00151.70 C
ATOM 21 C6 C A 9 -32.788 32.252-115.260 1.00154.93 C
ATOM 22 P G A 10 -31.562 35.023-110.584 1.00173.10 P
ATOM 23 OP1 G A 10 -30.719 35.655-109.544 1.00183.66 O
ATOM 24 OP2 G A 10 -31.323 33.565-110.606 1.00167.97 O
ATOM 25 O5' G A 10 -33.117 35.368-110.368 1.00167.27 O
TER
ATOM 1 O3' C B 7 -28.381 26.282-117.476 1.00228.93 O
ATOM 2 P C B 8 -29.507 26.498-116.321 1.00208.90 P
ATOM 3 OP1 C B 8 -29.522 25.325-115.420 1.00212.92 O
ATOM 4 OP2 C B 8 -30.782 26.918-116.935 1.00196.17 O
ATOM 5 O5' C B 8 -28.869 27.660-115.435 1.00205.25 O
ATOM 6 C5' C B 8 -29.571 28.831-115.178 1.00190.55 C
ATOM 7 C4' C B 8 -28.949 29.957-115.974 1.00194.64 C
ATOM 8 O4' C B 8 -29.146 29.798-117.405 1.00195.42 O
ATOM 9 C3' C B 8 -29.630 31.255-115.628 1.00185.06 C
ATOM 10 O3' C B 8 -28.882 31.875-114.634 1.00191.34 O
ATOM 11 C2' C B 8 -29.632 32.042-116.929 1.00186.40 C
ATOM 12 O2' C B 8 -28.467 32.805-117.111 1.00200.29 O
ATOM 13 C1' C B 8 -29.766 30.944-117.975 1.00187.48 C
ATOM 14 N1 C B 8 -31.223 30.683-118.309 1.00175.67 N
ATOM 15 C2 C B 8 -32.086 31.736-118.674 1.00168.26 C
ATOM 16 O2 C B 8 -31.654 32.893-118.741 1.00171.45 O
ATOM 17 N3 C B 8 -33.390 31.469-118.953 1.00160.54 N
ATOM 18 C4 C B 8 -33.844 30.219-118.883 1.00160.90 C
ATOM 19 N4 C B 8 -35.128 29.993-119.167 1.00157.87 N
ATOM 20 C5 C B 8 -33.001 29.137-118.513 1.00167.75 C
ATOM 21 C6 C B 8 -31.721 29.412-118.240 1.00174.84 C
ATOM 22 P C B 9 -29.456 31.933-113.148 1.00184.43 P
ATOM 23 OP1 C B 9 -28.628 31.141-112.216 1.00192.07 O
ATOM 24 OP2 C B 9 -30.858 31.478-113.085 1.00171.00 O
ATOM 25 O5' C B 9 -29.357 33.498-112.804 1.00187.34 O
TER
ATOM 2 P C A 9 -29.456 31.933-113.148 1.00184.43 P
ATOM 3 OP1 C A 9 -28.628 31.141-112.216 1.00192.07 O
ATOM 4 OP2 C A 9 -30.858 31.478-113.085 1.00171.00 O
ATOM 5 O5' C A 9 -29.357 33.498-112.804 1.00187.34 O
ATOM 6 C5' C A 9 -29.227 34.426-113.902 1.00189.74 C
ATOM 7 C4' C A 9 -30.529 35.110-114.240 1.00178.80 C
ATOM 8 O4' C A 9 -31.206 34.409-115.337 1.00170.45 O
ATOM 9 C3' C A 9 -31.638 35.006-113.209 1.00170.05 C
ATOM 10 O3' C A 9 -31.336 35.670-112.007 1.00176.61 O
ATOM 11 C2' C A 9 -32.815 35.559-114.019 1.00164.05 C
ATOM 12 O2' C A 9 -32.735 36.954-114.258 1.00171.00 O
ATOM 13 C1' C A 9 -32.605 34.710-115.315 1.00161.51 C
ATOM 14 N1 C A 9 -33.400 33.468-115.387 1.00153.78 N
ATOM 15 C2 C A 9 -34.731 33.518-115.594 1.00148.80 C
ATOM 16 O2 C A 9 -35.242 34.637-115.717 1.00149.84 O
ATOM 17 N3 C A 9 -35.467 32.352-115.662 1.00145.87 N
ATOM 18 C4 C A 9 -34.872 31.174-115.528 1.00147.15 C
ATOM 19 N4 C A 9 -35.638 30.089-115.597 1.00146.11 N
ATOM 20 C5 C A 9 -33.459 31.095-115.321 1.00151.70 C
ATOM 21 C6 C A 9 -32.788 32.252-115.260 1.00154.93 C
ATOM 22 P G A 10 -31.562 35.023-110.584 1.00173.10 P
ATOM 23 OP1 G A 10 -30.719 35.655-109.544 1.00183.66 O
ATOM 24 OP2 G A 10 -31.323 33.565-110.606 1.00167.97 O
ATOM 25 O5' G A 10 -33.117 35.368-110.368 1.00167.27 O
TER
ATOM 1 O3' C B 7 -28.381 26.282-117.476 1.00228.93 O
ATOM 2 P C B 8 -29.507 26.498-116.321 1.00208.90 P
ATOM 3 OP1 C B 8 -29.522 25.325-115.420 1.00212.92 O
ATOM 4 OP2 C B 8 -30.782 26.918-116.935 1.00196.17 O
ATOM 5 O5' C B 8 -28.869 27.660-115.435 1.00205.25 O
ATOM 6 C5' C B 8 -29.571 28.831-115.178 1.00190.55 C
ATOM 7 C4' C B 8 -28.949 29.957-115.974 1.00194.64 C
ATOM 8 O4' C B 8 -29.146 29.798-117.405 1.00195.42 O
ATOM 9 C3' C B 8 -29.630 31.255-115.628 1.00185.06 C
ATOM 10 O3' C B 8 -28.882 31.875-114.634 1.00191.34 O
ATOM 11 C2' C B 8 -29.632 32.042-116.929 1.00186.40 C
ATOM 12 O2' C B 8 -28.467 32.805-117.111 1.00200.29 O
ATOM 13 C1' C B 8 -29.766 30.944-117.975 1.00187.48 C
ATOM 14 N1 C B 8 -31.223 30.683-118.309 1.00175.67 N
ATOM 15 C2 C B 8 -32.086 31.736-118.674 1.00168.26 C
ATOM 16 O2 C B 8 -31.654 32.893-118.741 1.00171.45 O
ATOM 17 N3 C B 8 -33.390 31.469-118.953 1.00160.54 N
ATOM 18 C4 C B 8 -33.844 30.219-118.883 1.00160.90 C
ATOM 19 N4 C B 8 -35.128 29.993-119.167 1.00157.87 N
ATOM 20 C5 C B 8 -33.001 29.137-118.513 1.00167.75 C
ATOM 21 C6 C B 8 -31.721 29.412-118.240 1.00174.84 C
ATOM 22 P C B 9 -29.456 31.933-113.148 1.00184.43 P
ATOM 23 OP1 C B 9 -28.628 31.141-112.216 1.00192.07 O
ATOM 24 OP2 C B 9 -30.858 31.478-113.085 1.00171.00 O
ATOM 25 O5' C B 9 -29.357 33.498-112.804 1.00187.34 O
TER
Atoms:
C2: (-34.731,33.518,-115.594)
OP1: (-28.628,31.141,-112.216)
OP2: (-30.858,31.478,-113.085)
C4: (-34.872,31.174,-115.528)
O5': (-29.357,33.498,-112.804)
C3': (-31.638,35.006,-113.209)
C1': (-32.605,34.710,-115.315)
O4': (-31.206,34.409,-115.337)
C5': (-29.227,34.426,-113.902)
P: (-29.456,31.933,-113.148)
O2: (-35.242,34.637,-115.717)
C4': (-30.529,35.110,-114.240)
C2': (-32.815,35.559,-114.019)
O2': (-32.735,36.954,-114.258)
N1: (-33.400,33.468,-115.387)
N3: (-35.467,32.352,-115.662)
N4: (-35.638,30.089,-115.597)
C6: (-32.788,32.252,-115.260)
C5: (-33.459,31.095,-115.321)
O3': (-31.336,35.670,-112.007)
OP1: (-28.628,31.141,-112.216)
OP2: (-30.858,31.478,-113.085)
C4: (-34.872,31.174,-115.528)
O5': (-29.357,33.498,-112.804)
C3': (-31.638,35.006,-113.209)
C1': (-32.605,34.710,-115.315)
O4': (-31.206,34.409,-115.337)
C5': (-29.227,34.426,-113.902)
P: (-29.456,31.933,-113.148)
O2: (-35.242,34.637,-115.717)
C4': (-30.529,35.110,-114.240)
C2': (-32.815,35.559,-114.019)
O2': (-32.735,36.954,-114.258)
N1: (-33.400,33.468,-115.387)
N3: (-35.467,32.352,-115.662)
N4: (-35.638,30.089,-115.597)
C6: (-32.788,32.252,-115.260)
C5: (-33.459,31.095,-115.321)
O3': (-31.336,35.670,-112.007)
C2: (-32.086,31.736,-118.674)
OP1: (-29.522,25.325,-115.420)
OP2: (-30.782,26.918,-116.935)
C4: (-33.844,30.219,-118.883)
O5': (-28.869,27.660,-115.435)
C3': (-29.630,31.255,-115.628)
C1': (-29.766,30.944,-117.975)
O4': (-29.146,29.798,-117.405)
C5': (-29.571,28.831,-115.178)
P: (-29.507,26.498,-116.321)
O2: (-31.654,32.893,-118.741)
C4': (-28.949,29.957,-115.974)
C2': (-29.632,32.042,-116.929)
O2': (-28.467,32.805,-117.111)
N1: (-31.223,30.683,-118.309)
N3: (-33.390,31.469,-118.953)
N4: (-35.128,29.993,-119.167)
C6: (-31.721,29.412,-118.240)
C5: (-33.001,29.137,-118.513)
O3': (-28.882,31.875,-114.634)
OP1: (-29.522,25.325,-115.420)
OP2: (-30.782,26.918,-116.935)
C4: (-33.844,30.219,-118.883)
O5': (-28.869,27.660,-115.435)
C3': (-29.630,31.255,-115.628)
C1': (-29.766,30.944,-117.975)
O4': (-29.146,29.798,-117.405)
C5': (-29.571,28.831,-115.178)
P: (-29.507,26.498,-116.321)
O2: (-31.654,32.893,-118.741)
C4': (-28.949,29.957,-115.974)
C2': (-29.632,32.042,-116.929)
O2': (-28.467,32.805,-117.111)
N1: (-31.223,30.683,-118.309)
N3: (-33.390,31.469,-118.953)
N4: (-35.128,29.993,-119.167)
C6: (-31.721,29.412,-118.240)
C5: (-33.001,29.137,-118.513)
O3': (-28.882,31.875,-114.634)
Image (generated by PyMOL):