ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1GTS:B11:B42

Extra

PDB:
ATOM 1 O3' C A 10 29.308 22.775 24.956 1.00 24.79 O
ATOM 2 P A A 11 28.495 24.160 24.810 1.00 19.82 P
ATOM 3 OP1 A A 11 29.455 24.751 23.877 1.00 20.95 O
ATOM 4 OP2 A A 11 28.236 24.800 26.116 1.00 21.64 O
ATOM 5 O5' A A 11 27.116 23.974 24.069 1.00 22.05 O
ATOM 6 C5' A A 11 27.021 23.675 22.688 1.00 24.96 C
ATOM 7 C4' A A 11 25.556 23.466 22.408 1.00 27.74 C
ATOM 8 O4' A A 11 24.991 22.479 23.298 1.00 29.78 O
ATOM 9 C3' A A 11 24.787 24.719 22.764 1.00 27.00 C
ATOM 10 O3' A A 11 24.881 25.634 21.651 1.00 23.08 O
ATOM 11 C2' A A 11 23.368 24.175 22.998 1.00 28.46 C
ATOM 12 O2' A A 11 22.704 23.894 21.760 1.00 30.92 O
ATOM 13 C1' A A 11 23.643 22.836 23.660 1.00 28.06 C
ATOM 14 N9 A A 11 23.483 22.933 25.126 1.00 28.54 N
ATOM 15 C8 A A 11 24.428 23.138 26.100 1.00 27.92 C
ATOM 16 N7 A A 11 23.937 23.172 27.308 1.00 27.58 N
ATOM 17 C5 A A 11 22.577 22.974 27.126 1.00 29.25 C
ATOM 18 C6 A A 11 21.508 22.907 28.033 1.00 32.20 C
ATOM 19 N6 A A 11 21.672 23.025 29.357 1.00 33.02 N
ATOM 20 N1 A A 11 20.288 22.706 27.506 1.00 32.72 N
ATOM 21 C2 A A 11 20.155 22.580 26.193 1.00 30.85 C
ATOM 22 N3 A A 11 21.074 22.618 25.247 1.00 29.41 N
ATOM 23 C4 A A 11 22.287 22.826 25.797 1.00 28.47 C
ATOM 24 P A A 12 23.876 26.894 21.610 1.00 25.29 P
ATOM 25 OP1 A A 12 24.534 27.058 20.291 1.00 25.61 O
ATOM 26 OP2 A A 12 24.285 27.772 22.732 1.00 30.44 O
ATOM 27 O5' A A 12 22.289 27.012 21.486 1.00 29.76 O
TER

ATOM 1 O3' C B 41 15.093 15.343 33.358 1.00100.17 O
ATOM 2 P A B 42 14.097 16.006 34.454 1.00100.03 P
ATOM 3 OP1 A B 42 13.844 15.104 35.599 1.00100.31 O
ATOM 4 OP2 A B 42 12.990 16.829 33.916 1.00100.19 O
ATOM 5 O5' A B 42 15.332 16.957 34.807 1.00 97.97 O
ATOM 6 C5' A B 42 15.439 17.694 36.027 1.00 94.64 C
ATOM 7 C4' A B 42 15.402 19.198 35.789 1.00 91.61 C
ATOM 8 O4' A B 42 16.171 19.470 34.632 1.00 87.54 O
ATOM 9 C3' A B 42 14.042 19.751 35.395 1.00 92.22 C
ATOM 10 O3' A B 42 13.159 19.970 36.538 1.00 97.27 O
ATOM 11 C2' A B 42 14.392 21.064 34.721 1.00 89.06 C
ATOM 12 O2' A B 42 14.427 22.175 35.632 1.00 89.50 O
ATOM 13 C1' A B 42 15.838 20.801 34.275 1.00 85.68 C
ATOM 14 N9 A B 42 16.016 21.002 32.817 1.00 78.72 N
ATOM 15 C8 A B 42 15.114 20.898 31.791 1.00 76.68 C
ATOM 16 N7 A B 42 15.598 21.221 30.621 1.00 75.42 N
ATOM 17 C5 A B 42 16.920 21.556 30.889 1.00 73.86 C
ATOM 18 C6 A B 42 17.970 21.983 30.067 1.00 71.10 C
ATOM 19 N6 A B 42 17.843 22.172 28.761 1.00 69.79 N
ATOM 20 N1 A B 42 19.147 22.220 30.647 1.00 70.71 N
ATOM 21 C2 A B 42 19.255 22.043 31.957 1.00 71.35 C
ATOM 22 N3 A B 42 18.360 21.654 32.839 1.00 73.06 N
ATOM 23 C4 A B 42 17.185 21.422 32.222 1.00 74.96 C
ATOM 24 P U B 43 13.523 20.613 37.986 1.00101.75 P
ATOM 25 OP1 U B 43 14.689 21.402 38.433 1.00101.99 O
ATOM 26 OP2 U B 43 13.267 19.304 38.621 1.00102.59 O
ATOM 27 O5' U B 43 12.200 21.540 38.127 1.00104.00 O
TER

Atoms:
OP1: (29.455,24.751,23.877)
OP2: (28.236,24.800,26.116)
C3': (24.787,24.719,22.764)
C1': (23.643,22.836,23.660)
C5': (27.021,23.675,22.688)
O4': (24.991,22.479,23.298)
C8: (24.428,23.138,26.100)
O2': (22.704,23.894,21.760)
C6: (21.508,22.907,28.033)
C5: (22.577,22.974,27.126)
C4: (22.287,22.826,25.797)
P: (28.495,24.160,24.810)
C4': (25.556,23.466,22.408)
C2': (23.368,24.175,22.998)
C2: (20.155,22.580,26.193)
N1: (20.288,22.706,27.506)
N3: (21.074,22.618,25.247)
N6: (21.672,23.025,29.357)
N7: (23.937,23.172,27.308)
N9: (23.483,22.933,25.126)
O5': (27.116,23.974,24.069)
O3': (24.881,25.634,21.651)
OP1: (13.844,15.104,35.599)
OP2: (12.990,16.829,33.916)
C3': (14.042,19.751,35.395)
C1': (15.838,20.801,34.275)
C5': (15.439,17.694,36.027)
O4': (16.171,19.470,34.632)
C8: (15.114,20.898,31.791)
O2': (14.427,22.175,35.632)
C6: (17.970,21.983,30.067)
C5: (16.920,21.556,30.889)
C4: (17.185,21.422,32.222)
P: (14.097,16.006,34.454)
C4': (15.402,19.198,35.789)
C2': (14.392,21.064,34.721)
C2: (19.255,22.043,31.957)
N1: (19.147,22.220,30.647)
N3: (18.360,21.654,32.839)
N6: (17.843,22.172,28.761)
N7: (15.598,21.221,30.621)
N9: (16.016,21.002,32.817)
O5': (15.332,16.957,34.807)
O3': (13.159,19.970,36.538)
Image (generated by PyMOL):
PyMOL image
show in jmol