ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHC:A579:A578

Extra

PDB:
ATOM 1 O3' C A 578 44.554 48.026 56.666 1.00105.53 O
ATOM 2 P C A 579 44.814 47.062 57.919 1.00115.67 P
ATOM 3 OP1 C A 579 45.830 47.728 58.778 1.00124.34 O
ATOM 4 OP2 C A 579 45.114 45.719 57.376 1.00128.97 O
ATOM 5 O5' C A 579 43.399 47.045 58.654 1.00113.08 O
ATOM 6 C5' C A 579 42.856 48.228 59.226 1.00115.33 C
ATOM 7 C4' C A 579 41.518 47.971 59.872 1.00109.47 C
ATOM 8 O4' C A 579 40.524 47.712 58.852 1.00106.19 O
ATOM 9 C3' C A 579 41.446 46.761 60.789 1.00107.30 C
ATOM 10 O3' C A 579 41.914 47.041 62.096 1.00112.40 O
ATOM 11 C2' C A 579 39.974 46.376 60.739 1.00108.09 C
ATOM 12 O2' C A 579 39.212 47.188 61.616 1.00107.38 O
ATOM 13 C1' C A 579 39.605 46.742 59.303 1.00112.44 C
ATOM 14 N1 C A 579 39.674 45.578 58.397 1.00120.63 N
ATOM 15 C2 C A 579 38.637 44.636 58.406 1.00119.47 C
ATOM 16 O2 C A 579 37.688 44.796 59.190 1.00118.90 O
ATOM 17 N3 C A 579 38.707 43.574 57.565 1.00121.12 N
ATOM 18 C4 C A 579 39.753 43.441 56.737 1.00120.62 C
ATOM 19 N4 C A 579 39.786 42.381 55.925 1.00116.45 N
ATOM 20 C5 C A 579 40.819 44.390 56.704 1.00118.44 C
ATOM 21 C6 C A 579 40.735 45.433 57.542 1.00119.73 C
ATOM 22 P A A 580 42.507 45.863 63.014 1.00140.25 P
ATOM 23 OP1 A A 580 43.112 46.500 64.213 1.00138.89 O
ATOM 24 OP2 A A 580 43.367 45.024 62.143 1.00144.90 O
ATOM 25 O5' A A 580 41.203 45.051 63.434 1.00112.55 O
TER

ATOM 1 O3' C B 577 46.025 46.666 50.917 1.00103.57 O
ATOM 2 P C B 578 46.247 45.910 52.318 1.00112.70 P
ATOM 3 OP1 C B 578 47.601 46.272 52.814 1.00132.53 O
ATOM 4 OP2 C B 578 45.932 44.485 52.095 1.00139.36 O
ATOM 5 O5' C B 578 45.135 46.569 53.246 1.00113.39 O
ATOM 6 C5' C B 578 45.125 47.971 53.481 1.00114.32 C
ATOM 7 C4' C B 578 43.949 48.387 54.326 1.00110.02 C
ATOM 8 O4' C B 578 42.723 48.200 53.582 1.00110.04 O
ATOM 9 C3' C B 578 43.734 47.591 55.606 1.00106.86 C
ATOM 10 O3' C B 578 44.554 48.026 56.666 1.00105.53 O
ATOM 11 C2' C B 578 42.253 47.779 55.879 1.00111.42 C
ATOM 12 O2' C B 578 42.015 49.031 56.508 1.00110.64 O
ATOM 13 C1' C B 578 41.682 47.826 54.460 1.00116.16 C
ATOM 14 N1 C B 578 41.156 46.519 54.034 1.00119.46 N
ATOM 15 C2 C B 578 39.824 46.223 54.331 1.00119.47 C
ATOM 16 O2 C B 578 39.148 47.060 54.948 1.00117.11 O
ATOM 17 N3 C B 578 39.317 45.032 53.947 1.00123.26 N
ATOM 18 C4 C B 578 40.089 44.168 53.289 1.00121.82 C
ATOM 19 N4 C B 578 39.544 43.005 52.928 1.00121.95 N
ATOM 20 C5 C B 578 41.450 44.453 52.971 1.00123.10 C
ATOM 21 C6 C B 578 41.945 45.633 53.359 1.00119.60 C
ATOM 22 P C B 579 44.814 47.062 57.919 1.00115.67 P
ATOM 23 OP1 C B 579 45.830 47.728 58.778 1.00124.34 O
ATOM 24 OP2 C B 579 45.114 45.719 57.376 1.00128.97 O
ATOM 25 O5' C B 579 43.399 47.045 58.654 1.00113.08 O
TER

Atoms:
C2: (38.637,44.636,58.406)
OP1: (45.830,47.728,58.778)
OP2: (45.114,45.719,57.376)
C4: (39.753,43.441,56.737)
O5': (43.399,47.045,58.654)
C3': (41.446,46.761,60.789)
C1': (39.605,46.742,59.303)
O4': (40.524,47.712,58.852)
C5': (42.856,48.228,59.226)
P: (44.814,47.062,57.919)
O2: (37.688,44.796,59.190)
C4': (41.518,47.971,59.872)
C2': (39.974,46.376,60.739)
O2': (39.212,47.188,61.616)
N1: (39.674,45.578,58.397)
N3: (38.707,43.574,57.565)
N4: (39.786,42.381,55.925)
C6: (40.735,45.433,57.542)
C5: (40.819,44.390,56.704)
O3': (41.914,47.041,62.096)
C2: (39.824,46.223,54.331)
OP1: (47.601,46.272,52.814)
OP2: (45.932,44.485,52.095)
C4: (40.089,44.168,53.289)
O5': (45.135,46.569,53.246)
C3': (43.734,47.591,55.606)
C1': (41.682,47.826,54.460)
O4': (42.723,48.200,53.582)
C5': (45.125,47.971,53.481)
P: (46.247,45.910,52.318)
O2: (39.148,47.060,54.948)
C4': (43.949,48.387,54.326)
C2': (42.253,47.779,55.879)
O2': (42.015,49.031,56.508)
N1: (41.156,46.519,54.034)
N3: (39.317,45.032,53.947)
N4: (39.544,43.005,52.928)
C6: (41.945,45.633,53.359)
C5: (41.450,44.453,52.971)
O3': (44.554,48.026,56.666)
Image (generated by PyMOL):
PyMOL image
show in jmol