ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3SKW:A34:A33

Extra

PDB:
ATOM 1 O3' C A 33 33.845 -11.395 12.063 1.00117.86 O
ATOM 2 P C A 34 32.726 -11.379 13.215 1.00104.96 P
ATOM 3 OP1 C A 34 31.419 -11.614 12.555 1.00105.05 O
ATOM 4 OP2 C A 34 32.916 -10.134 13.993 1.00102.45 O
ATOM 5 O5' C A 34 33.095 -12.637 14.106 1.00 67.75 O
ATOM 6 C5' C A 34 32.165 -13.133 15.049 1.00 66.54 C
ATOM 7 C4' C A 34 32.710 -13.090 16.456 1.00 67.32 C
ATOM 8 O4' C A 34 33.635 -11.975 16.625 1.00 65.00 O
ATOM 9 C3' C A 34 31.691 -12.851 17.545 1.00 68.32 C
ATOM 10 O3' C A 34 30.882 -13.977 17.809 1.00 72.96 O
ATOM 11 C2' C A 34 32.564 -12.411 18.705 1.00 66.13 C
ATOM 12 O2' C A 34 33.252 -13.517 19.261 1.00 71.38 O
ATOM 13 C1' C A 34 33.583 -11.526 17.973 1.00 63.99 C
ATOM 14 N1 C A 34 33.173 -10.111 17.985 1.00 62.62 N
ATOM 15 C2 C A 34 32.725 -9.559 19.190 1.00 62.99 C
ATOM 16 O2 C A 34 32.711 -10.255 20.224 1.00 64.30 O
ATOM 17 N3 C A 34 32.308 -8.272 19.196 1.00 61.03 N
ATOM 18 C4 C A 34 32.329 -7.545 18.076 1.00 62.47 C
ATOM 19 N4 C A 34 31.917 -6.275 18.142 1.00 63.61 N
ATOM 20 C5 C A 34 32.774 -8.083 16.837 1.00 62.43 C
ATOM 21 C6 C A 34 33.176 -9.362 16.844 1.00 63.71 C
ATOM 22 P C A 35 29.307 -13.899 17.507 1.00114.50 P
ATOM 23 OP1 C A 35 28.759 -15.268 17.647 1.00113.65 O
ATOM 24 OP2 C A 35 29.145 -13.199 16.210 1.00114.75 O
ATOM 25 O5' C A 35 28.782 -12.977 18.691 1.00 71.23 O
TER

ATOM 1 O3' C B 32 39.099 -11.747 11.082 1.00105.16 O
ATOM 2 P C B 33 39.343 -12.088 12.636 1.00109.08 P
ATOM 3 OP1 C B 33 40.527 -11.315 13.078 1.00108.08 O
ATOM 4 OP2 C B 33 39.370 -13.565 12.754 1.00110.08 O
ATOM 5 O5' C B 33 38.038 -11.520 13.342 1.00120.79 O
ATOM 6 C5' C B 33 36.975 -12.388 13.725 1.00119.95 C
ATOM 7 C4' C B 33 35.647 -11.671 13.711 1.00118.09 C
ATOM 8 O4' C B 33 35.731 -10.542 14.615 1.00114.14 O
ATOM 9 C3' C B 33 35.231 -11.125 12.345 1.00117.55 C
ATOM 10 O3' C B 33 33.845 -11.395 12.063 1.00117.86 O
ATOM 11 C2' C B 33 35.492 -9.616 12.428 1.00112.51 C
ATOM 12 O2' C B 33 34.536 -8.817 11.763 1.00109.01 O
ATOM 13 C1' C B 33 35.524 -9.318 13.934 1.00110.76 C
ATOM 14 N1 C B 33 36.625 -8.400 14.315 1.00105.43 N
ATOM 15 C2 C B 33 36.513 -7.465 15.352 1.00100.91 C
ATOM 16 O2 C B 33 35.462 -7.389 16.006 1.00 98.57 O
ATOM 17 N3 C B 33 37.573 -6.659 15.617 1.00 99.44 N
ATOM 18 C4 C B 33 38.699 -6.752 14.905 1.00 97.85 C
ATOM 19 N4 C B 33 39.713 -5.941 15.203 1.00 95.08 N
ATOM 20 C5 C B 33 38.839 -7.687 13.847 1.00101.04 C
ATOM 21 C6 C B 33 37.787 -8.475 13.596 1.00104.32 C
ATOM 22 P C B 34 32.726 -11.379 13.215 1.00104.96 P
ATOM 23 OP1 C B 34 31.419 -11.614 12.555 1.00105.05 O
ATOM 24 OP2 C B 34 32.916 -10.134 13.993 1.00102.45 O
ATOM 25 O5' C B 34 33.095 -12.637 14.106 1.00 67.75 O
TER

Atoms:
C2: (32.725,-9.559,19.190)
OP1: (31.419,-11.614,12.555)
OP2: (32.916,-10.134,13.993)
C4: (32.329,-7.545,18.076)
O5': (33.095,-12.637,14.106)
C3': (31.691,-12.851,17.545)
C1': (33.583,-11.526,17.973)
O4': (33.635,-11.975,16.625)
C5': (32.165,-13.133,15.049)
P: (32.726,-11.379,13.215)
O2: (32.711,-10.255,20.224)
C4': (32.710,-13.090,16.456)
C2': (32.564,-12.411,18.705)
O2': (33.252,-13.517,19.261)
N1: (33.173,-10.111,17.985)
N3: (32.308,-8.272,19.196)
N4: (31.917,-6.275,18.142)
C6: (33.176,-9.362,16.844)
C5: (32.774,-8.083,16.837)
O3': (30.882,-13.977,17.809)
C2: (36.513,-7.465,15.352)
OP1: (40.527,-11.315,13.078)
OP2: (39.370,-13.565,12.754)
C4: (38.699,-6.752,14.905)
O5': (38.038,-11.520,13.342)
C3': (35.231,-11.125,12.345)
C1': (35.524,-9.318,13.934)
O4': (35.731,-10.542,14.615)
C5': (36.975,-12.388,13.725)
P: (39.343,-12.088,12.636)
O2: (35.462,-7.389,16.006)
C4': (35.647,-11.671,13.711)
C2': (35.492,-9.616,12.428)
O2': (34.536,-8.817,11.763)
N1: (36.625,-8.400,14.315)
N3: (37.573,-6.659,15.617)
N4: (39.713,-5.941,15.203)
C6: (37.787,-8.475,13.596)
C5: (38.839,-7.687,13.847)
O3': (33.845,-11.395,12.063)
Image (generated by PyMOL):
PyMOL image
show in jmol