Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SLM:A39:A38
Extra
PDB:
ATOM 1 O3' C A 38 8.658 3.789 23.114 1.00 44.46 O
ATOM 2 P C A 39 7.321 4.632 22.854 1.00 57.43 P
ATOM 3 OP1 C A 39 7.623 6.044 23.188 1.00 56.61 O
ATOM 4 OP2 C A 39 6.218 3.942 23.575 1.00 42.62 O
ATOM 5 O5' C A 39 7.111 4.479 21.290 1.00 56.86 O
ATOM 6 C5' C A 39 6.610 3.275 20.742 1.00 50.13 C
ATOM 7 C4' C A 39 7.327 2.919 19.472 1.00 52.78 C
ATOM 8 O4' C A 39 8.741 2.725 19.746 1.00 53.85 O
ATOM 9 C3' C A 39 6.902 1.621 18.810 1.00 49.00 C
ATOM 10 O3' C A 39 5.707 1.744 18.062 1.00 42.63 O
ATOM 11 C2' C A 39 8.131 1.268 17.983 1.00 52.27 C
ATOM 12 O2' C A 39 8.229 2.104 16.838 1.00 50.30 O
ATOM 13 C1' C A 39 9.241 1.667 18.953 1.00 54.33 C
ATOM 14 N1 C A 39 9.620 0.547 19.852 1.00 55.91 N
ATOM 15 C2 C A 39 10.241 -0.584 19.307 1.00 53.03 C
ATOM 16 O2 C A 39 10.467 -0.630 18.088 1.00 52.87 O
ATOM 17 N3 C A 39 10.580 -1.603 20.124 1.00 49.79 N
ATOM 18 C4 C A 39 10.335 -1.530 21.430 1.00 46.99 C
ATOM 19 N4 C A 39 10.706 -2.571 22.177 1.00 44.10 N
ATOM 20 C5 C A 39 9.704 -0.397 22.022 1.00 44.97 C
ATOM 21 C6 C A 39 9.368 0.605 21.201 1.00 49.50 C
ATOM 22 P U A 40 4.458 0.769 18.367 1.00 55.41 P
ATOM 23 OP1 U A 40 3.220 1.541 18.106 1.00 51.00 O
ATOM 24 OP2 U A 40 4.657 0.189 19.720 1.00 47.29 O
ATOM 25 O5' U A 40 4.644 -0.354 17.259 1.00 49.64 O
TER
ATOM 1 O3' G B 37 12.261 7.983 20.580 1.00 40.46 O
ATOM 2 P C B 38 10.783 7.974 21.196 1.00 57.05 P
ATOM 3 OP1 C B 38 9.833 7.804 20.069 1.00 56.07 O
ATOM 4 OP2 C B 38 10.659 9.178 22.057 1.00 55.93 O
ATOM 5 O5' C B 38 10.795 6.669 22.099 1.00 55.36 O
ATOM 6 C5' C B 38 10.997 5.386 21.536 1.00 47.73 C
ATOM 7 C4' C B 38 10.977 4.328 22.603 1.00 43.26 C
ATOM 8 O4' C B 38 12.164 4.439 23.413 1.00 40.75 O
ATOM 9 C3' C B 38 9.831 4.421 23.593 1.00 40.57 C
ATOM 10 O3' C B 38 8.658 3.789 23.114 1.00 44.46 O
ATOM 11 C2' C B 38 10.398 3.763 24.849 1.00 41.09 C
ATOM 12 O2' C B 38 10.248 2.357 24.783 1.00 44.90 O
ATOM 13 C1' C B 38 11.882 4.072 24.741 1.00 39.83 C
ATOM 14 N1 C B 38 12.333 5.154 25.656 1.00 40.63 N
ATOM 15 C2 C B 38 12.877 4.752 26.883 1.00 35.31 C
ATOM 16 O2 C B 38 12.898 3.550 27.168 1.00 35.58 O
ATOM 17 N3 C B 38 13.358 5.669 27.741 1.00 34.63 N
ATOM 18 C4 C B 38 13.330 6.956 27.401 1.00 36.40 C
ATOM 19 N4 C B 38 13.820 7.813 28.297 1.00 32.92 N
ATOM 20 C5 C B 38 12.798 7.410 26.154 1.00 34.96 C
ATOM 21 C6 C B 38 12.323 6.482 25.312 1.00 38.34 C
ATOM 22 P C B 39 7.321 4.632 22.854 1.00 57.43 P
ATOM 23 OP1 C B 39 7.623 6.044 23.188 1.00 56.61 O
ATOM 24 OP2 C B 39 6.218 3.942 23.575 1.00 42.62 O
ATOM 25 O5' C B 39 7.111 4.479 21.290 1.00 56.86 O
TER
ATOM 2 P C A 39 7.321 4.632 22.854 1.00 57.43 P
ATOM 3 OP1 C A 39 7.623 6.044 23.188 1.00 56.61 O
ATOM 4 OP2 C A 39 6.218 3.942 23.575 1.00 42.62 O
ATOM 5 O5' C A 39 7.111 4.479 21.290 1.00 56.86 O
ATOM 6 C5' C A 39 6.610 3.275 20.742 1.00 50.13 C
ATOM 7 C4' C A 39 7.327 2.919 19.472 1.00 52.78 C
ATOM 8 O4' C A 39 8.741 2.725 19.746 1.00 53.85 O
ATOM 9 C3' C A 39 6.902 1.621 18.810 1.00 49.00 C
ATOM 10 O3' C A 39 5.707 1.744 18.062 1.00 42.63 O
ATOM 11 C2' C A 39 8.131 1.268 17.983 1.00 52.27 C
ATOM 12 O2' C A 39 8.229 2.104 16.838 1.00 50.30 O
ATOM 13 C1' C A 39 9.241 1.667 18.953 1.00 54.33 C
ATOM 14 N1 C A 39 9.620 0.547 19.852 1.00 55.91 N
ATOM 15 C2 C A 39 10.241 -0.584 19.307 1.00 53.03 C
ATOM 16 O2 C A 39 10.467 -0.630 18.088 1.00 52.87 O
ATOM 17 N3 C A 39 10.580 -1.603 20.124 1.00 49.79 N
ATOM 18 C4 C A 39 10.335 -1.530 21.430 1.00 46.99 C
ATOM 19 N4 C A 39 10.706 -2.571 22.177 1.00 44.10 N
ATOM 20 C5 C A 39 9.704 -0.397 22.022 1.00 44.97 C
ATOM 21 C6 C A 39 9.368 0.605 21.201 1.00 49.50 C
ATOM 22 P U A 40 4.458 0.769 18.367 1.00 55.41 P
ATOM 23 OP1 U A 40 3.220 1.541 18.106 1.00 51.00 O
ATOM 24 OP2 U A 40 4.657 0.189 19.720 1.00 47.29 O
ATOM 25 O5' U A 40 4.644 -0.354 17.259 1.00 49.64 O
TER
ATOM 1 O3' G B 37 12.261 7.983 20.580 1.00 40.46 O
ATOM 2 P C B 38 10.783 7.974 21.196 1.00 57.05 P
ATOM 3 OP1 C B 38 9.833 7.804 20.069 1.00 56.07 O
ATOM 4 OP2 C B 38 10.659 9.178 22.057 1.00 55.93 O
ATOM 5 O5' C B 38 10.795 6.669 22.099 1.00 55.36 O
ATOM 6 C5' C B 38 10.997 5.386 21.536 1.00 47.73 C
ATOM 7 C4' C B 38 10.977 4.328 22.603 1.00 43.26 C
ATOM 8 O4' C B 38 12.164 4.439 23.413 1.00 40.75 O
ATOM 9 C3' C B 38 9.831 4.421 23.593 1.00 40.57 C
ATOM 10 O3' C B 38 8.658 3.789 23.114 1.00 44.46 O
ATOM 11 C2' C B 38 10.398 3.763 24.849 1.00 41.09 C
ATOM 12 O2' C B 38 10.248 2.357 24.783 1.00 44.90 O
ATOM 13 C1' C B 38 11.882 4.072 24.741 1.00 39.83 C
ATOM 14 N1 C B 38 12.333 5.154 25.656 1.00 40.63 N
ATOM 15 C2 C B 38 12.877 4.752 26.883 1.00 35.31 C
ATOM 16 O2 C B 38 12.898 3.550 27.168 1.00 35.58 O
ATOM 17 N3 C B 38 13.358 5.669 27.741 1.00 34.63 N
ATOM 18 C4 C B 38 13.330 6.956 27.401 1.00 36.40 C
ATOM 19 N4 C B 38 13.820 7.813 28.297 1.00 32.92 N
ATOM 20 C5 C B 38 12.798 7.410 26.154 1.00 34.96 C
ATOM 21 C6 C B 38 12.323 6.482 25.312 1.00 38.34 C
ATOM 22 P C B 39 7.321 4.632 22.854 1.00 57.43 P
ATOM 23 OP1 C B 39 7.623 6.044 23.188 1.00 56.61 O
ATOM 24 OP2 C B 39 6.218 3.942 23.575 1.00 42.62 O
ATOM 25 O5' C B 39 7.111 4.479 21.290 1.00 56.86 O
TER
Atoms:
C2: (10.241,-0.584,19.307)
OP1: (7.623,6.044,23.188)
OP2: (6.218,3.942,23.575)
C4: (10.335,-1.530,21.430)
O5': (7.111,4.479,21.290)
C3': (6.902,1.621,18.810)
C1': (9.241,1.667,18.953)
O4': (8.741,2.725,19.746)
C5': (6.610,3.275,20.742)
P: (7.321,4.632,22.854)
O2: (10.467,-0.630,18.088)
C4': (7.327,2.919,19.472)
C2': (8.131,1.268,17.983)
O2': (8.229,2.104,16.838)
N1: (9.620,0.547,19.852)
N3: (10.580,-1.603,20.124)
N4: (10.706,-2.571,22.177)
C6: (9.368,0.605,21.201)
C5: (9.704,-0.397,22.022)
O3': (5.707,1.744,18.062)
OP1: (7.623,6.044,23.188)
OP2: (6.218,3.942,23.575)
C4: (10.335,-1.530,21.430)
O5': (7.111,4.479,21.290)
C3': (6.902,1.621,18.810)
C1': (9.241,1.667,18.953)
O4': (8.741,2.725,19.746)
C5': (6.610,3.275,20.742)
P: (7.321,4.632,22.854)
O2: (10.467,-0.630,18.088)
C4': (7.327,2.919,19.472)
C2': (8.131,1.268,17.983)
O2': (8.229,2.104,16.838)
N1: (9.620,0.547,19.852)
N3: (10.580,-1.603,20.124)
N4: (10.706,-2.571,22.177)
C6: (9.368,0.605,21.201)
C5: (9.704,-0.397,22.022)
O3': (5.707,1.744,18.062)
C2: (12.877,4.752,26.883)
OP1: (9.833,7.804,20.069)
OP2: (10.659,9.178,22.057)
C4: (13.330,6.956,27.401)
O5': (10.795,6.669,22.099)
C3': (9.831,4.421,23.593)
C1': (11.882,4.072,24.741)
O4': (12.164,4.439,23.413)
C5': (10.997,5.386,21.536)
P: (10.783,7.974,21.196)
O2: (12.898,3.550,27.168)
C4': (10.977,4.328,22.603)
C2': (10.398,3.763,24.849)
O2': (10.248,2.357,24.783)
N1: (12.333,5.154,25.656)
N3: (13.358,5.669,27.741)
N4: (13.820,7.813,28.297)
C6: (12.323,6.482,25.312)
C5: (12.798,7.410,26.154)
O3': (8.658,3.789,23.114)
OP1: (9.833,7.804,20.069)
OP2: (10.659,9.178,22.057)
C4: (13.330,6.956,27.401)
O5': (10.795,6.669,22.099)
C3': (9.831,4.421,23.593)
C1': (11.882,4.072,24.741)
O4': (12.164,4.439,23.413)
C5': (10.997,5.386,21.536)
P: (10.783,7.974,21.196)
O2: (12.898,3.550,27.168)
C4': (10.977,4.328,22.603)
C2': (10.398,3.763,24.849)
O2': (10.248,2.357,24.783)
N1: (12.333,5.154,25.656)
N3: (13.358,5.669,27.741)
N4: (13.820,7.813,28.297)
C6: (12.323,6.482,25.312)
C5: (12.798,7.410,26.154)
O3': (8.658,3.789,23.114)
Image (generated by PyMOL):