ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A494:A518

Extra

PDB:
ATOM 1 O3' A A 493 32.878-102.696 -39.643 1.00 64.56 O
ATOM 2 P A A 494 31.721-103.482 -40.437 1.00 56.92 P
ATOM 3 OP1 A A 494 32.035-103.421 -41.878 1.00 56.89 O
ATOM 4 OP2 A A 494 30.432-102.936 -39.960 1.00 66.73 O
ATOM 5 O5' A A 494 31.902-104.971 -39.907 1.00 46.90 O
ATOM 6 C5' A A 494 32.974-105.765 -40.363 1.00 45.73 C
ATOM 7 C4' A A 494 33.228-106.946 -39.465 1.00 45.66 C
ATOM 8 O4' A A 494 34.366-107.687 -39.991 1.00 66.33 O
ATOM 9 C3' A A 494 33.620-106.631 -38.020 1.00 53.67 C
ATOM 10 O3' A A 494 32.500-106.419 -37.166 1.00 59.72 O
ATOM 11 C2' A A 494 34.457-107.844 -37.637 1.00 57.91 C
ATOM 12 O2' A A 494 33.617-108.954 -37.380 1.00 63.85 O
ATOM 13 C1' A A 494 35.202-108.116 -38.938 1.00 61.29 C
ATOM 14 N9 A A 494 36.485-107.376 -39.016 1.00 54.97 N
ATOM 15 C8 A A 494 36.829-106.315 -39.818 1.00 55.53 C
ATOM 16 N7 A A 494 38.060-105.881 -39.662 1.00 50.96 N
ATOM 17 C5 A A 494 38.547-106.719 -38.700 1.00 44.01 C
ATOM 18 C6 A A 494 39.775-106.775 -38.080 1.00 46.21 C
ATOM 19 N6 A A 494 40.747-105.941 -38.380 1.00 55.33 N
ATOM 20 N1 A A 494 39.978-107.715 -37.150 1.00 49.60 N
ATOM 21 C2 A A 494 38.976-108.542 -36.873 1.00 51.37 C
ATOM 22 N3 A A 494 37.756-108.577 -37.389 1.00 47.52 N
ATOM 23 C4 A A 494 37.608-107.630 -38.302 1.00 47.66 C
ATOM 24 P G A 495 32.703-105.952 -35.634 1.00 50.32 P
ATOM 25 OP1 G A 495 34.092-106.259 -35.247 1.00 60.79 O
ATOM 26 OP2 G A 495 31.623-106.547 -34.858 1.00 56.90 O
ATOM 27 O5' G A 495 32.517-104.383 -35.710 1.00 74.76 O
TER

ATOM 1 O3' U B 517 50.708-105.992 -28.450 1.00107.22 O
ATOM 2 P A B 518 51.033-107.014 -29.650 1.00 99.59 P
ATOM 3 OP1 A B 518 50.421-108.309 -29.293 1.00 88.24 O
ATOM 4 OP2 A B 518 52.498-106.958 -29.887 1.00 83.68 O
ATOM 5 O5' A B 518 50.254-106.366 -30.892 1.00 78.19 O
ATOM 6 C5' A B 518 48.873-106.013 -30.792 1.00 63.78 C
ATOM 7 C4' A B 518 48.504-104.883 -31.734 1.00 55.35 C
ATOM 8 O4' A B 518 48.404-105.380 -33.097 1.00 54.10 O
ATOM 9 C3' A B 518 47.163-104.211 -31.463 1.00 48.47 C
ATOM 10 O3' A B 518 47.268-103.167 -30.518 1.00 47.81 O
ATOM 11 C2' A B 518 46.710-103.728 -32.843 1.00 50.77 C
ATOM 12 O2' A B 518 47.272-102.469 -33.159 1.00 55.36 O
ATOM 13 C1' A B 518 47.313-104.772 -33.768 1.00 48.51 C
ATOM 14 N9 A B 518 46.335-105.806 -34.090 1.00 50.03 N
ATOM 15 C8 A B 518 46.242-107.075 -33.592 1.00 59.09 C
ATOM 16 N7 A B 518 45.225-107.750 -34.067 1.00 61.83 N
ATOM 17 C5 A B 518 44.606-106.855 -34.913 1.00 52.90 C
ATOM 18 C6 A B 518 43.459-106.956 -35.705 1.00 51.07 C
ATOM 19 N6 A B 518 42.708-108.053 -35.782 1.00 50.96 N
ATOM 20 N1 A B 518 43.113-105.871 -36.419 1.00 47.43 N
ATOM 21 C2 A B 518 43.884-104.784 -36.310 1.00 54.31 C
ATOM 22 N3 A B 518 44.991-104.558 -35.587 1.00 51.17 N
ATOM 23 C4 A B 518 45.288-105.655 -34.917 1.00 45.41 C
ATOM 24 P G B 519 46.400-103.205 -29.176 1.00 59.06 P
ATOM 25 OP1 G B 519 46.804-102.014 -28.364 1.00 52.11 O
ATOM 26 OP2 G B 519 46.552-104.565 -28.603 1.00 63.67 O
ATOM 27 O5' G B 519 44.911-103.013 -29.699 1.00 54.44 O
TER

Atoms:
OP1: (32.035,-103.421,-41.878)
OP2: (30.432,-102.936,-39.960)
C3': (33.620,-106.631,-38.020)
C1': (35.202,-108.116,-38.938)
C5': (32.974,-105.765,-40.363)
O4': (34.366,-107.687,-39.991)
C8: (36.829,-106.315,-39.818)
O2': (33.617,-108.954,-37.380)
C6: (39.775,-106.775,-38.080)
C5: (38.547,-106.719,-38.700)
C4: (37.608,-107.630,-38.302)
P: (31.721,-103.482,-40.437)
C4': (33.228,-106.946,-39.465)
C2': (34.457,-107.844,-37.637)
C2: (38.976,-108.542,-36.873)
N1: (39.978,-107.715,-37.150)
N3: (37.756,-108.577,-37.389)
N6: (40.747,-105.941,-38.380)
N7: (38.060,-105.881,-39.662)
N9: (36.485,-107.376,-39.016)
O5': (31.902,-104.971,-39.907)
O3': (32.500,-106.419,-37.166)
OP1: (50.421,-108.309,-29.293)
OP2: (52.498,-106.958,-29.887)
C3': (47.163,-104.211,-31.463)
C1': (47.313,-104.772,-33.768)
C5': (48.873,-106.013,-30.792)
O4': (48.404,-105.380,-33.097)
C8: (46.242,-107.075,-33.592)
O2': (47.272,-102.469,-33.159)
C6: (43.459,-106.956,-35.705)
C5: (44.606,-106.855,-34.913)
C4: (45.288,-105.655,-34.917)
P: (51.033,-107.014,-29.650)
C4': (48.504,-104.883,-31.734)
C2': (46.710,-103.728,-32.843)
C2: (43.884,-104.784,-36.310)
N1: (43.113,-105.871,-36.419)
N3: (44.991,-104.558,-35.587)
N6: (42.708,-108.053,-35.782)
N7: (45.225,-107.750,-34.067)
N9: (46.335,-105.806,-34.090)
O5': (50.254,-106.366,-30.892)
O3': (47.268,-103.167,-30.518)
Image (generated by PyMOL):
PyMOL image
show in jmol