ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1N32:A311:A319

Extra

PDB:
ATOM 1 O3' C A 310 127.188 49.806 -18.530 1.00 51.06 O
ATOM 2 P A A 311 126.114 50.987 -18.660 1.00 48.10 P
ATOM 3 OP1 A A 311 125.710 51.066 -20.090 1.00 51.36 O
ATOM 4 OP2 A A 311 126.656 52.191 -17.982 1.00 51.36 O
ATOM 5 O5' A A 311 124.876 50.493 -17.787 1.00 42.81 O
ATOM 6 C5' A A 311 124.069 49.401 -18.227 1.00 42.81 C
ATOM 7 C4' A A 311 123.890 48.408 -17.115 1.00 42.81 C
ATOM 8 O4' A A 311 125.057 48.442 -16.258 1.00 42.81 O
ATOM 9 C3' A A 311 122.725 48.631 -16.170 1.00 42.81 C
ATOM 10 O3' A A 311 121.557 48.055 -16.742 1.00 42.81 O
ATOM 11 C2' A A 311 123.174 47.881 -14.917 1.00 42.81 C
ATOM 12 O2' A A 311 122.978 46.488 -15.001 1.00 42.81 O
ATOM 13 C1' A A 311 124.685 48.084 -14.949 1.00 42.81 C
ATOM 14 N9 A A 311 125.142 49.105 -14.020 1.00 39.65 N
ATOM 15 C8 A A 311 125.654 50.354 -14.258 1.00 39.65 C
ATOM 16 N7 A A 311 125.970 51.010 -13.164 1.00 39.65 N
ATOM 17 C5 A A 311 125.642 50.128 -12.141 1.00 39.65 C
ATOM 18 C6 A A 311 125.738 50.215 -10.745 1.00 39.65 C
ATOM 19 N6 A A 311 126.234 51.261 -10.101 1.00 39.65 N
ATOM 20 N1 A A 311 125.308 49.165 -10.021 1.00 39.65 N
ATOM 21 C2 A A 311 124.833 48.096 -10.660 1.00 39.65 C
ATOM 22 N3 A A 311 124.706 47.884 -11.962 1.00 39.65 N
ATOM 23 C4 A A 311 125.130 48.955 -12.656 1.00 39.65 C
ATOM 24 P C A 312 120.108 48.428 -16.158 1.00 44.38 P
ATOM 25 OP1 C A 312 119.111 47.951 -17.147 1.00 52.04 O
ATOM 26 OP2 C A 312 120.091 49.834 -15.732 1.00 52.04 O
ATOM 27 O5' C A 312 119.988 47.569 -14.822 1.00 41.60 O
TER

ATOM 1 O3' C B 318 127.591 56.049 -10.565 1.00 46.45 O
ATOM 2 P A B 319 128.100 54.743 -9.760 1.00 50.13 P
ATOM 3 OP1 A B 319 129.539 54.966 -9.520 1.00 54.43 O
ATOM 4 OP2 A B 319 127.665 53.502 -10.415 1.00 54.43 O
ATOM 5 O5' A B 319 127.365 54.854 -8.344 1.00 48.78 O
ATOM 6 C5' A B 319 126.701 56.080 -7.959 1.00 48.78 C
ATOM 7 C4' A B 319 126.196 56.024 -6.524 1.00 48.78 C
ATOM 8 O4' A B 319 124.925 55.335 -6.437 1.00 48.78 O
ATOM 9 C3' A B 319 127.107 55.433 -5.452 1.00 48.78 C
ATOM 10 O3' A B 319 127.028 56.263 -4.295 1.00 48.78 O
ATOM 11 C2' A B 319 126.464 54.072 -5.180 1.00 48.78 C
ATOM 12 O2' A B 319 126.671 53.558 -3.878 1.00 48.78 O
ATOM 13 C1' A B 319 124.983 54.378 -5.399 1.00 48.78 C
ATOM 14 N9 A B 319 124.218 53.208 -5.816 1.00 43.97 N
ATOM 15 C8 A B 319 123.845 52.876 -7.086 1.00 43.97 C
ATOM 16 N7 A B 319 123.159 51.770 -7.164 1.00 43.97 N
ATOM 17 C5 A B 319 123.074 51.342 -5.856 1.00 43.97 C
ATOM 18 C6 A B 319 122.480 50.221 -5.281 1.00 43.97 C
ATOM 19 N6 A B 319 121.826 49.295 -5.989 1.00 43.97 N
ATOM 20 N1 A B 319 122.581 50.073 -3.944 1.00 43.97 N
ATOM 21 C2 A B 319 123.245 50.999 -3.250 1.00 43.97 C
ATOM 22 N3 A B 319 123.852 52.102 -3.683 1.00 43.97 N
ATOM 23 C4 A B 319 123.725 52.215 -5.013 1.00 43.97 C
ATOM 24 P C B 320 128.109 57.435 -4.079 1.00 59.91 P
ATOM 25 OP1 C B 320 127.541 58.395 -3.104 1.00 69.82 O
ATOM 26 OP2 C B 320 128.597 57.921 -5.398 1.00 69.82 O
ATOM 27 O5' C B 320 129.330 56.734 -3.360 1.00 56.66 O
TER

Atoms:
OP1: (125.710,51.066,-20.090)
OP2: (126.656,52.191,-17.982)
C3': (122.725,48.631,-16.170)
C1': (124.685,48.084,-14.949)
C5': (124.069,49.401,-18.227)
O4': (125.057,48.442,-16.258)
C8: (125.654,50.354,-14.258)
O2': (122.978,46.488,-15.001)
C6: (125.738,50.215,-10.745)
C5: (125.642,50.128,-12.141)
C4: (125.130,48.955,-12.656)
P: (126.114,50.987,-18.660)
C4': (123.890,48.408,-17.115)
C2': (123.174,47.881,-14.917)
C2: (124.833,48.096,-10.660)
N1: (125.308,49.165,-10.021)
N3: (124.706,47.884,-11.962)
N6: (126.234,51.261,-10.101)
N7: (125.970,51.010,-13.164)
N9: (125.142,49.105,-14.020)
O5': (124.876,50.493,-17.787)
O3': (121.557,48.055,-16.742)
OP1: (129.539,54.966,-9.520)
OP2: (127.665,53.502,-10.415)
C3': (127.107,55.433,-5.452)
C1': (124.983,54.378,-5.399)
C5': (126.701,56.080,-7.959)
O4': (124.925,55.335,-6.437)
C8: (123.845,52.876,-7.086)
O2': (126.671,53.558,-3.878)
C6: (122.480,50.221,-5.281)
C5: (123.074,51.342,-5.856)
C4: (123.725,52.215,-5.013)
P: (128.100,54.743,-9.760)
C4': (126.196,56.024,-6.524)
C2': (126.464,54.072,-5.180)
C2: (123.245,50.999,-3.250)
N1: (122.581,50.073,-3.944)
N3: (123.852,52.102,-3.683)
N6: (121.826,49.295,-5.989)
N7: (123.159,51.770,-7.164)
N9: (124.218,53.208,-5.816)
O5': (127.365,54.854,-8.344)
O3': (127.028,56.263,-4.295)
Image (generated by PyMOL):
PyMOL image
show in jmol