Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0620:0618
Extra
PDB:
ATOM 1 O3' A A 619 50.964 117.921 99.420 1.00 28.54 O
ATOM 2 P A A 620 51.115 116.779 98.307 1.00 29.00 P
ATOM 3 OP1 A A 620 49.796 116.537 97.682 1.00 30.28 O
ATOM 4 OP2 A A 620 51.859 115.645 98.887 1.00 28.48 O
ATOM 5 O5' A A 620 52.053 117.451 97.221 1.00 28.71 O
ATOM 6 C5' A A 620 51.497 118.099 96.073 1.00 27.21 C
ATOM 7 C4' A A 620 51.912 117.363 94.830 1.00 28.15 C
ATOM 8 O4' A A 620 51.296 116.053 94.788 1.00 28.96 O
ATOM 9 C3' A A 620 51.514 118.023 93.531 1.00 27.80 C
ATOM 10 O3' A A 620 52.523 118.965 93.224 1.00 31.20 O
ATOM 11 C2' A A 620 51.518 116.844 92.572 1.00 28.04 C
ATOM 12 O2' A A 620 52.831 116.465 92.212 1.00 28.17 O
ATOM 13 C1' A A 620 50.935 115.738 93.456 1.00 28.17 C
ATOM 14 N9 A A 620 49.471 115.645 93.401 1.00 29.68 N
ATOM 15 C8 A A 620 48.585 115.886 94.426 1.00 28.68 C
ATOM 16 N7 A A 620 47.333 115.732 94.092 1.00 26.94 N
ATOM 17 C5 A A 620 47.390 115.360 92.757 1.00 29.68 C
ATOM 18 C6 A A 620 46.389 115.039 91.824 1.00 31.04 C
ATOM 19 N6 A A 620 45.083 115.026 92.113 1.00 29.62 N
ATOM 20 N1 A A 620 46.781 114.718 90.573 1.00 30.70 N
ATOM 21 C2 A A 620 48.086 114.710 90.294 1.00 29.72 C
ATOM 22 N3 A A 620 49.118 114.981 91.085 1.00 29.76 N
ATOM 23 C4 A A 620 48.698 115.304 92.318 1.00 28.76 C
ATOM 24 P C A 621 52.133 120.444 92.762 1.00 33.36 P
ATOM 25 OP1 C A 621 53.341 121.269 92.978 1.00 36.07 O
ATOM 26 OP2 C A 621 50.858 120.847 93.384 1.00 35.41 O
ATOM 27 O5' C A 621 51.905 120.280 91.198 1.00 34.77 O
TER
ATOM 1 O3' A B 617 41.019 117.430 95.064 1.00 29.82 O
ATOM 2 P A B 618 42.345 116.941 94.314 1.00 31.60 P
ATOM 3 OP1 A B 618 42.400 117.772 93.090 1.00 29.50 O
ATOM 4 OP2 A B 618 42.315 115.463 94.197 1.00 35.18 O
ATOM 5 O5' A B 618 43.564 117.251 95.302 1.00 30.30 O
ATOM 6 C5' A B 618 43.847 118.577 95.758 1.00 29.07 C
ATOM 7 C4' A B 618 44.593 118.547 97.086 1.00 29.29 C
ATOM 8 O4' A B 618 43.945 117.614 97.994 1.00 28.72 O
ATOM 9 C3' A B 618 46.080 118.201 97.108 1.00 27.49 C
ATOM 10 O3' A B 618 46.717 118.999 98.105 1.00 28.58 O
ATOM 11 C2' A B 618 46.082 116.746 97.569 1.00 29.51 C
ATOM 12 O2' A B 618 47.240 116.360 98.284 1.00 28.66 O
ATOM 13 C1' A B 618 44.899 116.725 98.529 1.00 29.02 C
ATOM 14 N9 A B 618 44.291 115.399 98.616 1.00 29.87 N
ATOM 15 C8 A B 618 43.325 114.866 97.802 1.00 30.58 C
ATOM 16 N7 A B 618 42.976 113.647 98.124 1.00 30.74 N
ATOM 17 C5 A B 618 43.765 113.354 99.222 1.00 29.86 C
ATOM 18 C6 A B 618 43.873 112.209 100.022 1.00 30.51 C
ATOM 19 N6 A B 618 43.146 111.108 99.829 1.00 29.79 N
ATOM 20 N1 A B 618 44.764 112.233 101.040 1.00 30.55 N
ATOM 21 C2 A B 618 45.490 113.344 101.228 1.00 30.20 C
ATOM 22 N3 A B 618 45.475 114.488 100.541 1.00 31.06 N
ATOM 23 C4 A B 618 44.582 114.425 99.538 1.00 30.53 C
ATOM 24 P A B 619 46.765 120.601 97.936 1.00 30.89 P
ATOM 25 OP1 A B 619 45.651 121.168 98.740 1.00 31.51 O
ATOM 26 OP2 A B 619 46.849 120.913 96.480 1.00 26.58 O
ATOM 27 O5' A B 619 48.123 121.029 98.649 1.00 30.59 O
TER
ATOM 2 P A A 620 51.115 116.779 98.307 1.00 29.00 P
ATOM 3 OP1 A A 620 49.796 116.537 97.682 1.00 30.28 O
ATOM 4 OP2 A A 620 51.859 115.645 98.887 1.00 28.48 O
ATOM 5 O5' A A 620 52.053 117.451 97.221 1.00 28.71 O
ATOM 6 C5' A A 620 51.497 118.099 96.073 1.00 27.21 C
ATOM 7 C4' A A 620 51.912 117.363 94.830 1.00 28.15 C
ATOM 8 O4' A A 620 51.296 116.053 94.788 1.00 28.96 O
ATOM 9 C3' A A 620 51.514 118.023 93.531 1.00 27.80 C
ATOM 10 O3' A A 620 52.523 118.965 93.224 1.00 31.20 O
ATOM 11 C2' A A 620 51.518 116.844 92.572 1.00 28.04 C
ATOM 12 O2' A A 620 52.831 116.465 92.212 1.00 28.17 O
ATOM 13 C1' A A 620 50.935 115.738 93.456 1.00 28.17 C
ATOM 14 N9 A A 620 49.471 115.645 93.401 1.00 29.68 N
ATOM 15 C8 A A 620 48.585 115.886 94.426 1.00 28.68 C
ATOM 16 N7 A A 620 47.333 115.732 94.092 1.00 26.94 N
ATOM 17 C5 A A 620 47.390 115.360 92.757 1.00 29.68 C
ATOM 18 C6 A A 620 46.389 115.039 91.824 1.00 31.04 C
ATOM 19 N6 A A 620 45.083 115.026 92.113 1.00 29.62 N
ATOM 20 N1 A A 620 46.781 114.718 90.573 1.00 30.70 N
ATOM 21 C2 A A 620 48.086 114.710 90.294 1.00 29.72 C
ATOM 22 N3 A A 620 49.118 114.981 91.085 1.00 29.76 N
ATOM 23 C4 A A 620 48.698 115.304 92.318 1.00 28.76 C
ATOM 24 P C A 621 52.133 120.444 92.762 1.00 33.36 P
ATOM 25 OP1 C A 621 53.341 121.269 92.978 1.00 36.07 O
ATOM 26 OP2 C A 621 50.858 120.847 93.384 1.00 35.41 O
ATOM 27 O5' C A 621 51.905 120.280 91.198 1.00 34.77 O
TER
ATOM 1 O3' A B 617 41.019 117.430 95.064 1.00 29.82 O
ATOM 2 P A B 618 42.345 116.941 94.314 1.00 31.60 P
ATOM 3 OP1 A B 618 42.400 117.772 93.090 1.00 29.50 O
ATOM 4 OP2 A B 618 42.315 115.463 94.197 1.00 35.18 O
ATOM 5 O5' A B 618 43.564 117.251 95.302 1.00 30.30 O
ATOM 6 C5' A B 618 43.847 118.577 95.758 1.00 29.07 C
ATOM 7 C4' A B 618 44.593 118.547 97.086 1.00 29.29 C
ATOM 8 O4' A B 618 43.945 117.614 97.994 1.00 28.72 O
ATOM 9 C3' A B 618 46.080 118.201 97.108 1.00 27.49 C
ATOM 10 O3' A B 618 46.717 118.999 98.105 1.00 28.58 O
ATOM 11 C2' A B 618 46.082 116.746 97.569 1.00 29.51 C
ATOM 12 O2' A B 618 47.240 116.360 98.284 1.00 28.66 O
ATOM 13 C1' A B 618 44.899 116.725 98.529 1.00 29.02 C
ATOM 14 N9 A B 618 44.291 115.399 98.616 1.00 29.87 N
ATOM 15 C8 A B 618 43.325 114.866 97.802 1.00 30.58 C
ATOM 16 N7 A B 618 42.976 113.647 98.124 1.00 30.74 N
ATOM 17 C5 A B 618 43.765 113.354 99.222 1.00 29.86 C
ATOM 18 C6 A B 618 43.873 112.209 100.022 1.00 30.51 C
ATOM 19 N6 A B 618 43.146 111.108 99.829 1.00 29.79 N
ATOM 20 N1 A B 618 44.764 112.233 101.040 1.00 30.55 N
ATOM 21 C2 A B 618 45.490 113.344 101.228 1.00 30.20 C
ATOM 22 N3 A B 618 45.475 114.488 100.541 1.00 31.06 N
ATOM 23 C4 A B 618 44.582 114.425 99.538 1.00 30.53 C
ATOM 24 P A B 619 46.765 120.601 97.936 1.00 30.89 P
ATOM 25 OP1 A B 619 45.651 121.168 98.740 1.00 31.51 O
ATOM 26 OP2 A B 619 46.849 120.913 96.480 1.00 26.58 O
ATOM 27 O5' A B 619 48.123 121.029 98.649 1.00 30.59 O
TER
Atoms:
OP1: (49.796,116.537,97.682)
OP2: (51.859,115.645,98.887)
C3': (51.514,118.023,93.531)
C1': (50.935,115.738,93.456)
C5': (51.497,118.099,96.073)
O4': (51.296,116.053,94.788)
C8: (48.585,115.886,94.426)
O2': (52.831,116.465,92.212)
C6: (46.389,115.039,91.824)
C5: (47.390,115.360,92.757)
C4: (48.698,115.304,92.318)
P: (51.115,116.779,98.307)
C4': (51.912,117.363,94.830)
C2': (51.518,116.844,92.572)
C2: (48.086,114.710,90.294)
N1: (46.781,114.718,90.573)
N3: (49.118,114.981,91.085)
N6: (45.083,115.026,92.113)
N7: (47.333,115.732,94.092)
N9: (49.471,115.645,93.401)
O5': (52.053,117.451,97.221)
O3': (52.523,118.965,93.224)
OP2: (51.859,115.645,98.887)
C3': (51.514,118.023,93.531)
C1': (50.935,115.738,93.456)
C5': (51.497,118.099,96.073)
O4': (51.296,116.053,94.788)
C8: (48.585,115.886,94.426)
O2': (52.831,116.465,92.212)
C6: (46.389,115.039,91.824)
C5: (47.390,115.360,92.757)
C4: (48.698,115.304,92.318)
P: (51.115,116.779,98.307)
C4': (51.912,117.363,94.830)
C2': (51.518,116.844,92.572)
C2: (48.086,114.710,90.294)
N1: (46.781,114.718,90.573)
N3: (49.118,114.981,91.085)
N6: (45.083,115.026,92.113)
N7: (47.333,115.732,94.092)
N9: (49.471,115.645,93.401)
O5': (52.053,117.451,97.221)
O3': (52.523,118.965,93.224)
OP1: (42.400,117.772,93.090)
OP2: (42.315,115.463,94.197)
C3': (46.080,118.201,97.108)
C1': (44.899,116.725,98.529)
C5': (43.847,118.577,95.758)
O4': (43.945,117.614,97.994)
C8: (43.325,114.866,97.802)
O2': (47.240,116.360,98.284)
C6: (43.873,112.209,100.022)
C5: (43.765,113.354,99.222)
C4: (44.582,114.425,99.538)
P: (42.345,116.941,94.314)
C4': (44.593,118.547,97.086)
C2': (46.082,116.746,97.569)
C2: (45.490,113.344,101.228)
N1: (44.764,112.233,101.040)
N3: (45.475,114.488,100.541)
N6: (43.146,111.108,99.829)
N7: (42.976,113.647,98.124)
N9: (44.291,115.399,98.616)
O5': (43.564,117.251,95.302)
O3': (46.717,118.999,98.105)
OP2: (42.315,115.463,94.197)
C3': (46.080,118.201,97.108)
C1': (44.899,116.725,98.529)
C5': (43.847,118.577,95.758)
O4': (43.945,117.614,97.994)
C8: (43.325,114.866,97.802)
O2': (47.240,116.360,98.284)
C6: (43.873,112.209,100.022)
C5: (43.765,113.354,99.222)
C4: (44.582,114.425,99.538)
P: (42.345,116.941,94.314)
C4': (44.593,118.547,97.086)
C2': (46.082,116.746,97.569)
C2: (45.490,113.344,101.228)
N1: (44.764,112.233,101.040)
N3: (45.475,114.488,100.541)
N6: (43.146,111.108,99.829)
N7: (42.976,113.647,98.124)
N9: (44.291,115.399,98.616)
O5': (43.564,117.251,95.302)
O3': (46.717,118.999,98.105)
Image (generated by PyMOL):