ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0620:0618

Extra

PDB:
ATOM 1 O3' A A 619 51.283 118.062 99.713 1.00 35.49 O
ATOM 2 P A A 620 51.412 116.875 98.651 1.00 35.99 P
ATOM 3 OP1 A A 620 50.102 116.625 98.013 1.00 39.08 O
ATOM 4 OP2 A A 620 52.114 115.772 99.320 1.00 35.72 O
ATOM 5 O5' A A 620 52.352 117.472 97.530 1.00 35.36 O
ATOM 6 C5' A A 620 51.796 118.151 96.402 1.00 34.76 C
ATOM 7 C4' A A 620 52.221 117.463 95.132 1.00 36.21 C
ATOM 8 O4' A A 620 51.605 116.156 95.038 1.00 34.72 O
ATOM 9 C3' A A 620 51.827 118.177 93.857 1.00 35.30 C
ATOM 10 O3' A A 620 52.823 119.147 93.571 1.00 36.96 O
ATOM 11 C2' A A 620 51.801 117.040 92.844 1.00 36.46 C
ATOM 12 O2' A A 620 53.087 116.694 92.369 1.00 37.28 O
ATOM 13 C1' A A 620 51.243 115.894 93.694 1.00 35.56 C
ATOM 14 N9 A A 620 49.785 115.798 93.652 1.00 37.29 N
ATOM 15 C8 A A 620 48.908 116.045 94.683 1.00 38.04 C
ATOM 16 N7 A A 620 47.654 115.867 94.365 1.00 38.76 N
ATOM 17 C5 A A 620 47.702 115.475 93.036 1.00 41.11 C
ATOM 18 C6 A A 620 46.698 115.124 92.120 1.00 43.41 C
ATOM 19 N6 A A 620 45.395 115.108 92.418 1.00 45.89 N
ATOM 20 N1 A A 620 47.081 114.783 90.872 1.00 42.62 N
ATOM 21 C2 A A 620 48.385 114.807 90.575 1.00 41.46 C
ATOM 22 N3 A A 620 49.421 115.117 91.349 1.00 40.54 N
ATOM 23 C4 A A 620 49.008 115.440 92.582 1.00 38.88 C
ATOM 24 P C A 621 52.441 120.465 92.764 1.00 39.35 P
ATOM 25 OP1 C A 621 53.622 121.350 92.699 1.00 40.56 O
ATOM 26 OP2 C A 621 51.180 120.987 93.312 1.00 42.38 O
ATOM 27 O5' C A 621 52.129 119.904 91.318 1.00 38.56 O
TER

ATOM 1 O3' A B 617 41.067 117.320 95.187 1.00 37.06 O
ATOM 2 P A B 618 42.584 117.258 94.695 1.00 35.53 P
ATOM 3 OP1 A B 618 42.659 117.933 93.390 1.00 35.08 O
ATOM 4 OP2 A B 618 43.068 115.870 94.828 1.00 38.92 O
ATOM 5 O5' A B 618 43.341 118.172 95.746 1.00 38.18 O
ATOM 6 C5' A B 618 44.776 118.149 95.864 1.00 38.60 C
ATOM 7 C4' A B 618 45.174 118.525 97.267 1.00 37.72 C
ATOM 8 O4' A B 618 44.408 117.719 98.196 1.00 37.95 O
ATOM 9 C3' A B 618 46.630 118.298 97.618 1.00 38.31 C
ATOM 10 O3' A B 618 46.997 119.223 98.639 1.00 38.99 O
ATOM 11 C2' A B 618 46.593 116.868 98.149 1.00 40.33 C
ATOM 12 O2' A B 618 47.676 116.495 98.983 1.00 41.83 O
ATOM 13 C1' A B 618 45.269 116.869 98.915 1.00 39.38 C
ATOM 14 N9 A B 618 44.636 115.554 98.982 1.00 38.33 N
ATOM 15 C8 A B 618 43.683 115.043 98.144 1.00 37.65 C
ATOM 16 N7 A B 618 43.317 113.822 98.442 1.00 37.10 N
ATOM 17 C5 A B 618 44.079 113.510 99.553 1.00 36.81 C
ATOM 18 C6 A B 618 44.156 112.362 100.342 1.00 36.79 C
ATOM 19 N6 A B 618 43.446 111.261 100.113 1.00 37.89 N
ATOM 20 N1 A B 618 45.005 112.375 101.389 1.00 37.48 N
ATOM 21 C2 A B 618 45.727 113.475 101.608 1.00 38.97 C
ATOM 22 N3 A B 618 45.750 114.618 100.927 1.00 39.08 N
ATOM 23 C4 A B 618 44.891 114.569 99.901 1.00 37.96 C
ATOM 24 P A B 619 47.135 120.793 98.289 1.00 41.23 P
ATOM 25 OP1 A B 619 46.064 121.519 99.008 1.00 41.92 O
ATOM 26 OP2 A B 619 47.249 120.922 96.812 1.00 40.19 O
ATOM 27 O5' A B 619 48.504 121.251 98.961 1.00 38.87 O
TER

Atoms:
OP1: (50.102,116.625,98.013)
OP2: (52.114,115.772,99.320)
C3': (51.827,118.177,93.857)
C1': (51.243,115.894,93.694)
C5': (51.796,118.151,96.402)
O4': (51.605,116.156,95.038)
C8: (48.908,116.045,94.683)
O2': (53.087,116.694,92.369)
C6: (46.698,115.124,92.120)
C5: (47.702,115.475,93.036)
C4: (49.008,115.440,92.582)
P: (51.412,116.875,98.651)
C4': (52.221,117.463,95.132)
C2': (51.801,117.040,92.844)
C2: (48.385,114.807,90.575)
N1: (47.081,114.783,90.872)
N3: (49.421,115.117,91.349)
N6: (45.395,115.108,92.418)
N7: (47.654,115.867,94.365)
N9: (49.785,115.798,93.652)
O5': (52.352,117.472,97.530)
O3': (52.823,119.147,93.571)
OP1: (42.659,117.933,93.390)
OP2: (43.068,115.870,94.828)
C3': (46.630,118.298,97.618)
C1': (45.269,116.869,98.915)
C5': (44.776,118.149,95.864)
O4': (44.408,117.719,98.196)
C8: (43.683,115.043,98.144)
O2': (47.676,116.495,98.983)
C6: (44.156,112.362,100.342)
C5: (44.079,113.510,99.553)
C4: (44.891,114.569,99.901)
P: (42.584,117.258,94.695)
C4': (45.174,118.525,97.267)
C2': (46.593,116.868,98.149)
C2: (45.727,113.475,101.608)
N1: (45.005,112.375,101.389)
N3: (45.750,114.618,100.927)
N6: (43.446,111.261,100.113)
N7: (43.317,113.822,98.442)
N9: (44.636,115.554,98.982)
O5': (43.341,118.172,95.746)
O3': (46.997,119.223,98.639)
Image (generated by PyMOL):
PyMOL image
show in jmol