ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A794:A792

Extra

PDB:
ATOM 1 O3' A A 793 -20.074 109.254 81.858 1.00 18.10 O
ATOM 2 P A A 794 -18.764 110.099 82.038 1.00 13.89 P
ATOM 3 OP1 A A 794 -18.997 110.846 83.314 1.00 10.99 O
ATOM 4 OP2 A A 794 -18.446 110.831 80.797 1.00 9.48 O
ATOM 5 O5' A A 794 -17.679 108.945 82.215 1.00 5.93 O
ATOM 6 C5' A A 794 -16.880 108.849 83.376 1.00 6.36 C
ATOM 7 C4' A A 794 -15.452 109.085 83.013 1.00 5.93 C
ATOM 8 O4' A A 794 -14.777 109.519 84.196 1.00 6.50 O
ATOM 9 C3' A A 794 -14.661 107.902 82.501 1.00 5.93 C
ATOM 10 O3' A A 794 -14.730 107.799 81.086 1.00 6.45 O
ATOM 11 C2' A A 794 -13.244 108.265 82.895 1.00 5.93 C
ATOM 12 O2' A A 794 -12.673 109.114 81.919 1.00 5.93 O
ATOM 13 C1' A A 794 -13.469 109.032 84.196 1.00 5.93 C
ATOM 14 N9 A A 794 -13.324 108.235 85.399 1.00 0.79 N
ATOM 15 C8 A A 794 -14.138 107.247 85.881 1.00 0.79 C
ATOM 16 N7 A A 794 -13.718 106.721 87.002 1.00 0.79 N
ATOM 17 C5 A A 794 -12.548 107.418 87.273 1.00 0.79 C
ATOM 18 C6 A A 794 -11.622 107.339 88.315 1.00 0.79 C
ATOM 19 N6 A A 794 -11.738 106.511 89.347 1.00 0.79 N
ATOM 20 N1 A A 794 -10.553 108.162 88.267 1.00 0.79 N
ATOM 21 C2 A A 794 -10.445 109.024 87.248 1.00 1.69 C
ATOM 22 N3 A A 794 -11.260 109.206 86.225 1.00 0.79 N
ATOM 23 C4 A A 794 -12.300 108.354 86.294 1.00 0.79 C
ATOM 24 P C A 795 -14.166 106.473 80.328 1.00 9.07 P
ATOM 25 OP1 C A 795 -14.528 105.227 81.087 1.00 3.52 O
ATOM 26 OP2 C A 795 -12.737 106.710 79.933 1.00 3.52 O
ATOM 27 O5' C A 795 -15.086 106.451 79.029 1.00 8.06 O
TER

ATOM 1 O3' U B 791 -15.869 105.782 91.809 1.00 21.25 O
ATOM 2 P A B 792 -15.979 104.978 90.424 1.00 34.56 P
ATOM 3 OP1 A B 792 -16.959 103.882 90.680 1.00 26.55 O
ATOM 4 OP2 A B 792 -14.617 104.648 89.914 1.00 24.72 O
ATOM 5 O5' A B 792 -16.638 106.038 89.443 1.00 24.66 O
ATOM 6 C5' A B 792 -18.035 106.329 89.552 1.00 23.86 C
ATOM 7 C4' A B 792 -18.432 107.419 88.586 1.00 23.05 C
ATOM 8 O4' A B 792 -17.822 108.677 88.970 1.00 24.65 O
ATOM 9 C3' A B 792 -18.053 107.260 87.120 1.00 23.73 C
ATOM 10 O3' A B 792 -18.970 106.407 86.453 1.00 26.47 O
ATOM 11 C2' A B 792 -18.136 108.697 86.605 1.00 24.15 C
ATOM 12 O2' A B 792 -19.436 109.120 86.265 1.00 25.77 O
ATOM 13 C1' A B 792 -17.697 109.499 87.829 1.00 23.00 C
ATOM 14 N9 A B 792 -16.315 109.915 87.693 1.00 0.79 N
ATOM 15 C8 A B 792 -15.169 109.353 88.182 1.00 0.79 C
ATOM 16 N7 A B 792 -14.076 109.955 87.782 1.00 0.79 N
ATOM 17 C5 A B 792 -14.542 110.987 86.989 1.00 0.79 C
ATOM 18 C6 A B 792 -13.890 111.966 86.241 1.00 0.79 C
ATOM 19 N6 A B 792 -12.567 112.046 86.127 1.00 0.79 N
ATOM 20 N1 A B 792 -14.651 112.862 85.582 1.00 0.79 N
ATOM 21 C2 A B 792 -15.982 112.746 85.653 1.00 0.79 C
ATOM 22 N3 A B 792 -16.712 111.846 86.297 1.00 0.79 N
ATOM 23 C4 A B 792 -15.919 110.989 86.953 1.00 0.79 C
ATOM 24 P A B 793 -18.466 105.461 85.258 1.00 0.79 P
ATOM 25 OP1 A B 793 -19.243 104.205 85.436 1.00 0.79 O
ATOM 26 OP2 A B 793 -16.984 105.420 85.170 1.00 0.79 O
ATOM 27 O5' A B 793 -19.025 106.173 83.956 1.00 17.44 O
TER

Atoms:
OP1: (-18.997,110.846,83.314)
OP2: (-18.446,110.831,80.797)
C3': (-14.661,107.902,82.501)
C1': (-13.469,109.032,84.196)
C5': (-16.880,108.849,83.376)
O4': (-14.777,109.519,84.196)
C8: (-14.138,107.247,85.881)
O2': (-12.673,109.114,81.919)
C6: (-11.622,107.339,88.315)
C5: (-12.548,107.418,87.273)
C4: (-12.300,108.354,86.294)
P: (-18.764,110.099,82.038)
C4': (-15.452,109.085,83.013)
C2': (-13.244,108.265,82.895)
C2: (-10.445,109.024,87.248)
N1: (-10.553,108.162,88.267)
N3: (-11.260,109.206,86.225)
N6: (-11.738,106.511,89.347)
N7: (-13.718,106.721,87.002)
N9: (-13.324,108.235,85.399)
O5': (-17.679,108.945,82.215)
O3': (-14.730,107.799,81.086)
OP1: (-16.959,103.882,90.680)
OP2: (-14.617,104.648,89.914)
C3': (-18.053,107.260,87.120)
C1': (-17.697,109.499,87.829)
C5': (-18.035,106.329,89.552)
O4': (-17.822,108.677,88.970)
C8: (-15.169,109.353,88.182)
O2': (-19.436,109.120,86.265)
C6: (-13.890,111.966,86.241)
C5: (-14.542,110.987,86.989)
C4: (-15.919,110.989,86.953)
P: (-15.979,104.978,90.424)
C4': (-18.432,107.419,88.586)
C2': (-18.136,108.697,86.605)
C2: (-15.982,112.746,85.653)
N1: (-14.651,112.862,85.582)
N3: (-16.712,111.846,86.297)
N6: (-12.567,112.046,86.127)
N7: (-14.076,109.955,87.782)
N9: (-16.315,109.915,87.693)
O5': (-16.638,106.038,89.443)
O3': (-18.970,106.407,86.453)
Image (generated by PyMOL):
PyMOL image
show in jmol