ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2UXC:A311:A319

Extra

PDB:
ATOM 1 O3' C A 310 127.125 49.855 -18.472 1.00 53.61 O
ATOM 2 P A A 311 126.054 51.038 -18.648 1.00 52.66 P
ATOM 3 OP1 A A 311 125.658 51.046 -20.085 1.00 51.46 O
ATOM 4 OP2 A A 311 126.600 52.278 -18.022 1.00 51.46 O
ATOM 5 O5' A A 311 124.803 50.584 -17.776 1.00 52.66 O
ATOM 6 C5' A A 311 124.036 49.449 -18.152 1.00 52.66 C
ATOM 7 C4' A A 311 123.899 48.505 -16.991 1.00 52.66 C
ATOM 8 O4' A A 311 125.065 48.610 -16.132 1.00 52.66 O
ATOM 9 C3' A A 311 122.739 48.708 -16.037 1.00 52.66 C
ATOM 10 O3' A A 311 121.565 48.123 -16.576 1.00 52.66 O
ATOM 11 C2' A A 311 123.213 47.946 -14.806 1.00 52.66 C
ATOM 12 O2' A A 311 123.069 46.550 -14.968 1.00 52.66 O
ATOM 13 C1' A A 311 124.714 48.216 -14.822 1.00 52.66 C
ATOM 14 N9 A A 311 125.159 49.223 -13.856 1.00 51.46 N
ATOM 15 C8 A A 311 125.713 50.462 -14.063 1.00 51.46 C
ATOM 16 N7 A A 311 126.051 51.082 -12.955 1.00 51.46 N
ATOM 17 C5 A A 311 125.680 50.195 -11.951 1.00 51.46 C
ATOM 18 C6 A A 311 125.786 50.246 -10.547 1.00 51.46 C
ATOM 19 N6 A A 311 126.332 51.253 -9.881 1.00 51.46 N
ATOM 20 N1 A A 311 125.315 49.200 -9.843 1.00 51.46 N
ATOM 21 C2 A A 311 124.784 48.170 -10.507 1.00 51.46 C
ATOM 22 N3 A A 311 124.639 47.995 -11.816 1.00 51.46 N
ATOM 23 C4 A A 311 125.114 49.056 -12.491 1.00 51.46 C
ATOM 24 P C A 312 120.137 48.402 -15.882 1.00 47.80 P
ATOM 25 OP1 C A 312 119.110 47.802 -16.782 1.00 59.35 O
ATOM 26 OP2 C A 312 120.013 49.821 -15.481 1.00 59.35 O
ATOM 27 O5' C A 312 120.189 47.557 -14.530 1.00 47.80 O
TER

ATOM 1 O3' C B 318 127.469 56.125 -10.454 1.00 49.43 O
ATOM 2 P A B 319 127.926 54.843 -9.586 1.00 53.63 P
ATOM 3 OP1 A B 319 129.382 55.000 -9.361 1.00 56.31 O
ATOM 4 OP2 A B 319 127.412 53.598 -10.178 1.00 56.31 O
ATOM 5 O5' A B 319 127.211 55.030 -8.172 1.00 53.63 O
ATOM 6 C5' A B 319 126.886 56.333 -7.678 1.00 53.63 C
ATOM 7 C4' A B 319 126.306 56.253 -6.280 1.00 53.63 C
ATOM 8 O4' A B 319 125.047 55.528 -6.279 1.00 53.63 O
ATOM 9 C3' A B 319 127.175 55.627 -5.195 1.00 53.63 C
ATOM 10 O3' A B 319 127.001 56.365 -3.993 1.00 53.63 O
ATOM 11 C2' A B 319 126.546 54.252 -5.001 1.00 53.63 C
ATOM 12 O2' A B 319 126.725 53.732 -3.697 1.00 53.63 O
ATOM 13 C1' A B 319 125.071 54.550 -5.260 1.00 53.63 C
ATOM 14 N9 A B 319 124.310 53.382 -5.708 1.00 56.31 N
ATOM 15 C8 A B 319 123.995 53.026 -6.995 1.00 56.31 C
ATOM 16 N7 A B 319 123.271 51.940 -7.081 1.00 56.31 N
ATOM 17 C5 A B 319 123.102 51.549 -5.764 1.00 56.31 C
ATOM 18 C6 A B 319 122.427 50.470 -5.187 1.00 56.31 C
ATOM 19 N6 A B 319 121.744 49.565 -5.897 1.00 56.31 N
ATOM 20 N1 A B 319 122.469 50.351 -3.841 1.00 56.31 N
ATOM 21 C2 A B 319 123.137 51.266 -3.139 1.00 56.31 C
ATOM 22 N3 A B 319 123.802 52.332 -3.567 1.00 56.31 N
ATOM 23 C4 A B 319 123.747 52.419 -4.907 1.00 56.31 C
ATOM 24 P C B 320 128.027 57.539 -3.615 1.00 60.08 P
ATOM 25 OP1 C B 320 127.381 58.287 -2.505 1.00 70.09 O
ATOM 26 OP2 C B 320 128.449 58.260 -4.848 1.00 70.09 O
ATOM 27 O5' C B 320 129.303 56.787 -3.051 1.00 60.08 O
TER

Atoms:
OP1: (125.658,51.046,-20.085)
OP2: (126.600,52.278,-18.022)
C3': (122.739,48.708,-16.037)
C1': (124.714,48.216,-14.822)
C5': (124.036,49.449,-18.152)
O4': (125.065,48.610,-16.132)
C8: (125.713,50.462,-14.063)
O2': (123.069,46.550,-14.968)
C6: (125.786,50.246,-10.547)
C5: (125.680,50.195,-11.951)
C4: (125.114,49.056,-12.491)
P: (126.054,51.038,-18.648)
C4': (123.899,48.505,-16.991)
C2': (123.213,47.946,-14.806)
C2: (124.784,48.170,-10.507)
N1: (125.315,49.200,-9.843)
N3: (124.639,47.995,-11.816)
N6: (126.332,51.253,-9.881)
N7: (126.051,51.082,-12.955)
N9: (125.159,49.223,-13.856)
O5': (124.803,50.584,-17.776)
O3': (121.565,48.123,-16.576)
OP1: (129.382,55.000,-9.361)
OP2: (127.412,53.598,-10.178)
C3': (127.175,55.627,-5.195)
C1': (125.071,54.550,-5.260)
C5': (126.886,56.333,-7.678)
O4': (125.047,55.528,-6.279)
C8: (123.995,53.026,-6.995)
O2': (126.725,53.732,-3.697)
C6: (122.427,50.470,-5.187)
C5: (123.102,51.549,-5.764)
C4: (123.747,52.419,-4.907)
P: (127.926,54.843,-9.586)
C4': (126.306,56.253,-6.280)
C2': (126.546,54.252,-5.001)
C2: (123.137,51.266,-3.139)
N1: (122.469,50.351,-3.841)
N3: (123.802,52.332,-3.567)
N6: (121.744,49.565,-5.897)
N7: (123.271,51.940,-7.081)
N9: (124.310,53.382,-5.708)
O5': (127.211,55.030,-8.172)
O3': (127.001,56.365,-3.993)
Image (generated by PyMOL):
PyMOL image
show in jmol