Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1F:A2024:A589
Extra
PDB:
ATOM 1 O3' G A2023 -47.660 122.225 189.720 1.00 46.37 O
ATOM 2 P A A2024 -48.320 122.798 188.389 1.00 58.53 P
ATOM 3 OP1 A A2024 -48.424 124.278 188.504 1.00 51.69 O
ATOM 4 OP2 A A2024 -49.502 121.972 188.050 1.00 54.09 O
ATOM 5 O5' A A2024 -47.167 122.434 187.344 1.00 52.74 O
ATOM 6 C5' A A2024 -47.407 122.515 185.951 1.00 51.69 C
ATOM 7 C4' A A2024 -46.149 122.994 185.249 1.00 47.11 C
ATOM 8 O4' A A2024 -46.097 124.435 185.297 1.00 44.38 O
ATOM 9 C3' A A2024 -44.842 122.554 185.890 1.00 44.07 C
ATOM 10 O3' A A2024 -44.432 121.314 185.345 1.00 41.70 O
ATOM 11 C2' A A2024 -43.873 123.638 185.441 1.00 52.21 C
ATOM 12 O2' A A2024 -43.123 123.199 184.327 1.00 53.55 O
ATOM 13 C1' A A2024 -44.764 124.814 185.031 1.00 47.27 C
ATOM 14 N9 A A2024 -44.490 126.040 185.774 1.00 46.81 N
ATOM 15 C8 A A2024 -44.574 126.196 187.129 1.00 50.73 C
ATOM 16 N7 A A2024 -44.277 127.401 187.547 1.00 50.25 N
ATOM 17 C5 A A2024 -43.978 128.085 186.382 1.00 51.26 C
ATOM 18 C6 A A2024 -43.589 129.421 186.161 1.00 51.92 C
ATOM 19 N6 A A2024 -43.442 130.302 187.154 1.00 52.68 N
ATOM 20 N1 A A2024 -43.365 129.798 184.886 1.00 46.44 N
ATOM 21 C2 A A2024 -43.532 128.885 183.918 1.00 52.92 C
ATOM 22 N3 A A2024 -43.895 127.602 183.997 1.00 41.77 N
ATOM 23 C4 A A2024 -44.105 127.263 185.275 1.00 45.42 C
ATOM 24 P A A2025 -44.684 119.959 186.145 1.00 64.97 P
ATOM 25 OP1 A A2025 -46.076 119.507 185.939 1.00 73.08 O
ATOM 26 OP2 A A2025 -44.147 120.123 187.509 1.00 69.41 O
ATOM 27 O5' A A2025 -43.736 118.989 185.322 1.00 80.23 O
TER
ATOM 1 O3' G B 588 -46.307 131.144 189.794 1.00 48.14 O
ATOM 2 P A B 589 -44.984 131.755 190.470 1.00 48.16 P
ATOM 3 OP1 A B 589 -45.219 131.706 191.929 1.00 58.93 O
ATOM 4 OP2 A B 589 -44.563 133.021 189.823 1.00 48.68 O
ATOM 5 O5' A B 589 -43.870 130.664 190.093 1.00 59.15 O
ATOM 6 C5' A B 589 -44.060 129.297 190.461 1.00 58.11 C
ATOM 7 C4' A B 589 -42.743 128.575 190.726 1.00 45.81 C
ATOM 8 O4' A B 589 -42.151 128.096 189.495 1.00 45.37 O
ATOM 9 C3' A B 589 -41.649 129.377 191.407 1.00 44.90 C
ATOM 10 O3' A B 589 -41.034 128.487 192.276 1.00 48.27 O
ATOM 11 C2' A B 589 -40.738 129.751 190.244 1.00 36.34 C
ATOM 12 O2' A B 589 -39.406 129.991 190.637 1.00 42.17 O
ATOM 13 C1' A B 589 -40.796 128.475 189.431 1.00 42.53 C
ATOM 14 N9 A B 589 -40.516 128.668 188.024 1.00 46.87 N
ATOM 15 C8 A B 589 -40.341 129.853 187.379 1.00 49.18 C
ATOM 16 N7 A B 589 -40.126 129.721 186.094 1.00 49.03 N
ATOM 17 C5 A B 589 -40.169 128.352 185.891 1.00 44.60 C
ATOM 18 C6 A B 589 -40.010 127.555 184.735 1.00 47.37 C
ATOM 19 N6 A B 589 -39.763 128.063 183.516 1.00 45.55 N
ATOM 20 N1 A B 589 -40.118 126.212 184.887 1.00 48.76 N
ATOM 21 C2 A B 589 -40.367 125.711 186.107 1.00 47.50 C
ATOM 22 N3 A B 589 -40.530 126.357 187.259 1.00 44.16 N
ATOM 23 C4 A B 589 -40.416 127.684 187.075 1.00 45.01 C
ATOM 24 P A B 590 -40.875 128.855 193.820 1.00 45.57 P
ATOM 25 OP1 A B 590 -42.179 128.678 194.495 1.00 51.48 O
ATOM 26 OP2 A B 590 -40.193 130.168 193.936 1.00 57.38 O
ATOM 27 O5' A B 590 -39.850 127.688 194.256 1.00 37.04 O
TER
ATOM 2 P A A2024 -48.320 122.798 188.389 1.00 58.53 P
ATOM 3 OP1 A A2024 -48.424 124.278 188.504 1.00 51.69 O
ATOM 4 OP2 A A2024 -49.502 121.972 188.050 1.00 54.09 O
ATOM 5 O5' A A2024 -47.167 122.434 187.344 1.00 52.74 O
ATOM 6 C5' A A2024 -47.407 122.515 185.951 1.00 51.69 C
ATOM 7 C4' A A2024 -46.149 122.994 185.249 1.00 47.11 C
ATOM 8 O4' A A2024 -46.097 124.435 185.297 1.00 44.38 O
ATOM 9 C3' A A2024 -44.842 122.554 185.890 1.00 44.07 C
ATOM 10 O3' A A2024 -44.432 121.314 185.345 1.00 41.70 O
ATOM 11 C2' A A2024 -43.873 123.638 185.441 1.00 52.21 C
ATOM 12 O2' A A2024 -43.123 123.199 184.327 1.00 53.55 O
ATOM 13 C1' A A2024 -44.764 124.814 185.031 1.00 47.27 C
ATOM 14 N9 A A2024 -44.490 126.040 185.774 1.00 46.81 N
ATOM 15 C8 A A2024 -44.574 126.196 187.129 1.00 50.73 C
ATOM 16 N7 A A2024 -44.277 127.401 187.547 1.00 50.25 N
ATOM 17 C5 A A2024 -43.978 128.085 186.382 1.00 51.26 C
ATOM 18 C6 A A2024 -43.589 129.421 186.161 1.00 51.92 C
ATOM 19 N6 A A2024 -43.442 130.302 187.154 1.00 52.68 N
ATOM 20 N1 A A2024 -43.365 129.798 184.886 1.00 46.44 N
ATOM 21 C2 A A2024 -43.532 128.885 183.918 1.00 52.92 C
ATOM 22 N3 A A2024 -43.895 127.602 183.997 1.00 41.77 N
ATOM 23 C4 A A2024 -44.105 127.263 185.275 1.00 45.42 C
ATOM 24 P A A2025 -44.684 119.959 186.145 1.00 64.97 P
ATOM 25 OP1 A A2025 -46.076 119.507 185.939 1.00 73.08 O
ATOM 26 OP2 A A2025 -44.147 120.123 187.509 1.00 69.41 O
ATOM 27 O5' A A2025 -43.736 118.989 185.322 1.00 80.23 O
TER
ATOM 1 O3' G B 588 -46.307 131.144 189.794 1.00 48.14 O
ATOM 2 P A B 589 -44.984 131.755 190.470 1.00 48.16 P
ATOM 3 OP1 A B 589 -45.219 131.706 191.929 1.00 58.93 O
ATOM 4 OP2 A B 589 -44.563 133.021 189.823 1.00 48.68 O
ATOM 5 O5' A B 589 -43.870 130.664 190.093 1.00 59.15 O
ATOM 6 C5' A B 589 -44.060 129.297 190.461 1.00 58.11 C
ATOM 7 C4' A B 589 -42.743 128.575 190.726 1.00 45.81 C
ATOM 8 O4' A B 589 -42.151 128.096 189.495 1.00 45.37 O
ATOM 9 C3' A B 589 -41.649 129.377 191.407 1.00 44.90 C
ATOM 10 O3' A B 589 -41.034 128.487 192.276 1.00 48.27 O
ATOM 11 C2' A B 589 -40.738 129.751 190.244 1.00 36.34 C
ATOM 12 O2' A B 589 -39.406 129.991 190.637 1.00 42.17 O
ATOM 13 C1' A B 589 -40.796 128.475 189.431 1.00 42.53 C
ATOM 14 N9 A B 589 -40.516 128.668 188.024 1.00 46.87 N
ATOM 15 C8 A B 589 -40.341 129.853 187.379 1.00 49.18 C
ATOM 16 N7 A B 589 -40.126 129.721 186.094 1.00 49.03 N
ATOM 17 C5 A B 589 -40.169 128.352 185.891 1.00 44.60 C
ATOM 18 C6 A B 589 -40.010 127.555 184.735 1.00 47.37 C
ATOM 19 N6 A B 589 -39.763 128.063 183.516 1.00 45.55 N
ATOM 20 N1 A B 589 -40.118 126.212 184.887 1.00 48.76 N
ATOM 21 C2 A B 589 -40.367 125.711 186.107 1.00 47.50 C
ATOM 22 N3 A B 589 -40.530 126.357 187.259 1.00 44.16 N
ATOM 23 C4 A B 589 -40.416 127.684 187.075 1.00 45.01 C
ATOM 24 P A B 590 -40.875 128.855 193.820 1.00 45.57 P
ATOM 25 OP1 A B 590 -42.179 128.678 194.495 1.00 51.48 O
ATOM 26 OP2 A B 590 -40.193 130.168 193.936 1.00 57.38 O
ATOM 27 O5' A B 590 -39.850 127.688 194.256 1.00 37.04 O
TER
Atoms:
OP1: (-48.424,124.278,188.504)
OP2: (-49.502,121.972,188.050)
C3': (-44.842,122.554,185.890)
C1': (-44.764,124.814,185.031)
C5': (-47.407,122.515,185.951)
O4': (-46.097,124.435,185.297)
C8: (-44.574,126.196,187.129)
O2': (-43.123,123.199,184.327)
C6: (-43.589,129.421,186.161)
C5: (-43.978,128.085,186.382)
C4: (-44.105,127.263,185.275)
P: (-48.320,122.798,188.389)
C4': (-46.149,122.994,185.249)
C2': (-43.873,123.638,185.441)
C2: (-43.532,128.885,183.918)
N1: (-43.365,129.798,184.886)
N3: (-43.895,127.602,183.997)
N6: (-43.442,130.302,187.154)
N7: (-44.277,127.401,187.547)
N9: (-44.490,126.040,185.774)
O5': (-47.167,122.434,187.344)
O3': (-44.432,121.314,185.345)
OP2: (-49.502,121.972,188.050)
C3': (-44.842,122.554,185.890)
C1': (-44.764,124.814,185.031)
C5': (-47.407,122.515,185.951)
O4': (-46.097,124.435,185.297)
C8: (-44.574,126.196,187.129)
O2': (-43.123,123.199,184.327)
C6: (-43.589,129.421,186.161)
C5: (-43.978,128.085,186.382)
C4: (-44.105,127.263,185.275)
P: (-48.320,122.798,188.389)
C4': (-46.149,122.994,185.249)
C2': (-43.873,123.638,185.441)
C2: (-43.532,128.885,183.918)
N1: (-43.365,129.798,184.886)
N3: (-43.895,127.602,183.997)
N6: (-43.442,130.302,187.154)
N7: (-44.277,127.401,187.547)
N9: (-44.490,126.040,185.774)
O5': (-47.167,122.434,187.344)
O3': (-44.432,121.314,185.345)
OP1: (-45.219,131.706,191.929)
OP2: (-44.563,133.021,189.823)
C3': (-41.649,129.377,191.407)
C1': (-40.796,128.475,189.431)
C5': (-44.060,129.297,190.461)
O4': (-42.151,128.096,189.495)
C8: (-40.341,129.853,187.379)
O2': (-39.406,129.991,190.637)
C6: (-40.010,127.555,184.735)
C5: (-40.169,128.352,185.891)
C4: (-40.416,127.684,187.075)
P: (-44.984,131.755,190.470)
C4': (-42.743,128.575,190.726)
C2': (-40.738,129.751,190.244)
C2: (-40.367,125.711,186.107)
N1: (-40.118,126.212,184.887)
N3: (-40.530,126.357,187.259)
N6: (-39.763,128.063,183.516)
N7: (-40.126,129.721,186.094)
N9: (-40.516,128.668,188.024)
O5': (-43.870,130.664,190.093)
O3': (-41.034,128.487,192.276)
OP2: (-44.563,133.021,189.823)
C3': (-41.649,129.377,191.407)
C1': (-40.796,128.475,189.431)
C5': (-44.060,129.297,190.461)
O4': (-42.151,128.096,189.495)
C8: (-40.341,129.853,187.379)
O2': (-39.406,129.991,190.637)
C6: (-40.010,127.555,184.735)
C5: (-40.169,128.352,185.891)
C4: (-40.416,127.684,187.075)
P: (-44.984,131.755,190.470)
C4': (-42.743,128.575,190.726)
C2': (-40.738,129.751,190.244)
C2: (-40.367,125.711,186.107)
N1: (-40.118,126.212,184.887)
N3: (-40.530,126.357,187.259)
N6: (-39.763,128.063,183.516)
N7: (-40.126,129.721,186.094)
N9: (-40.516,128.668,188.024)
O5': (-43.870,130.664,190.093)
O3': (-41.034,128.487,192.276)
Image (generated by PyMOL):