Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A2406:A2376
Extra
PDB:
ATOM 1 O3' G A2405 -111.614 -32.157 50.660 1.00 74.58 O
ATOM 2 P A A2406 -112.442 -32.581 49.352 1.00 75.81 P
ATOM 3 OP1 A A2406 -112.140 -31.619 48.271 1.00 67.12 O
ATOM 4 OP2 A A2406 -113.846 -32.804 49.763 1.00 98.66 O
ATOM 5 O5' A A2406 -111.853 -34.011 48.954 1.00 78.85 O
ATOM 6 C5' A A2406 -112.604 -34.837 48.058 1.00 78.75 C
ATOM 7 C4' A A2406 -111.663 -35.506 47.081 1.00 76.52 C
ATOM 8 O4' A A2406 -110.691 -36.235 47.861 1.00 70.49 O
ATOM 9 C3' A A2406 -112.241 -36.558 46.142 1.00 76.20 C
ATOM 10 O3' A A2406 -112.924 -36.030 44.977 1.00 66.67 O
ATOM 11 C2' A A2406 -110.982 -37.351 45.794 1.00 76.11 C
ATOM 12 O2' A A2406 -110.133 -36.690 44.874 1.00 77.85 O
ATOM 13 C1' A A2406 -110.295 -37.396 47.157 1.00 77.46 C
ATOM 14 N9 A A2406 -110.651 -38.527 48.003 1.00 73.62 N
ATOM 15 C8 A A2406 -111.905 -38.894 48.385 1.00 72.43 C
ATOM 16 N7 A A2406 -111.934 -39.953 49.156 1.00 71.20 N
ATOM 17 C5 A A2406 -110.605 -40.296 49.300 1.00 67.77 C
ATOM 18 C6 A A2406 -109.975 -41.331 50.006 1.00 68.69 C
ATOM 19 N6 A A2406 -110.652 -42.232 50.717 1.00 75.37 N
ATOM 20 N1 A A2406 -108.636 -41.404 49.947 1.00 66.51 N
ATOM 21 C2 A A2406 -107.984 -40.497 49.220 1.00 71.02 C
ATOM 22 N3 A A2406 -108.462 -39.477 48.513 1.00 69.75 N
ATOM 23 C4 A A2406 -109.797 -39.429 48.597 1.00 71.00 C
ATOM 24 P U A2407 -112.585 -34.656 44.218 1.00 72.29 P
ATOM 25 OP1 U A2407 -111.537 -33.925 44.952 1.00 75.44 O
ATOM 26 OP2 U A2407 -113.866 -33.981 43.927 1.00 82.19 O
ATOM 27 O5' U A2407 -111.975 -35.142 42.828 1.00 58.55 O
TER
ATOM 1 O3' G B2375 -114.417 -44.390 49.173 1.00 62.65 O
ATOM 2 P A B2376 -114.342 -44.440 50.775 1.00 56.21 P
ATOM 3 OP1 A B2376 -115.733 -44.394 51.225 1.00 66.78 O
ATOM 4 OP2 A B2376 -113.367 -43.442 51.265 1.00 65.25 O
ATOM 5 O5' A B2376 -113.765 -45.886 51.102 1.00 53.61 O
ATOM 6 C5' A B2376 -114.478 -47.004 50.626 1.00 56.22 C
ATOM 7 C4' A B2376 -113.618 -48.245 50.716 1.00 53.90 C
ATOM 8 O4' A B2376 -112.706 -48.344 49.599 1.00 53.36 O
ATOM 9 C3' A B2376 -112.672 -48.288 51.901 1.00 49.27 C
ATOM 10 O3' A B2376 -113.366 -48.554 53.095 1.00 47.59 O
ATOM 11 C2' A B2376 -111.861 -49.500 51.504 1.00 55.92 C
ATOM 12 O2' A B2376 -112.581 -50.682 51.768 1.00 54.44 O
ATOM 13 C1' A B2376 -111.726 -49.286 49.998 1.00 68.08 C
ATOM 14 N9 A B2376 -110.387 -48.815 49.680 1.00 73.77 N
ATOM 15 C8 A B2376 -109.229 -49.484 49.956 1.00 75.24 C
ATOM 16 N7 A B2376 -108.142 -48.862 49.577 1.00 62.49 N
ATOM 17 C5 A B2376 -108.626 -47.707 49.017 1.00 56.06 C
ATOM 18 C6 A B2376 -107.955 -46.641 48.434 1.00 60.23 C
ATOM 19 N6 A B2376 -106.629 -46.605 48.339 1.00 57.60 N
ATOM 20 N1 A B2376 -108.717 -45.636 47.968 1.00 71.03 N
ATOM 21 C2 A B2376 -110.057 -45.711 48.088 1.00 61.70 C
ATOM 22 N3 A B2376 -110.810 -46.673 48.615 1.00 51.51 N
ATOM 23 C4 A B2376 -110.010 -47.649 49.068 1.00 58.49 C
ATOM 24 P A B2377 -112.930 -47.734 54.388 1.00 54.91 P
ATOM 25 OP1 A B2377 -113.558 -48.377 55.573 1.00 55.30 O
ATOM 26 OP2 A B2377 -113.171 -46.296 54.086 1.00 49.32 O
ATOM 27 O5' A B2377 -111.341 -47.991 54.415 1.00 74.73 O
TER
ATOM 2 P A A2406 -112.442 -32.581 49.352 1.00 75.81 P
ATOM 3 OP1 A A2406 -112.140 -31.619 48.271 1.00 67.12 O
ATOM 4 OP2 A A2406 -113.846 -32.804 49.763 1.00 98.66 O
ATOM 5 O5' A A2406 -111.853 -34.011 48.954 1.00 78.85 O
ATOM 6 C5' A A2406 -112.604 -34.837 48.058 1.00 78.75 C
ATOM 7 C4' A A2406 -111.663 -35.506 47.081 1.00 76.52 C
ATOM 8 O4' A A2406 -110.691 -36.235 47.861 1.00 70.49 O
ATOM 9 C3' A A2406 -112.241 -36.558 46.142 1.00 76.20 C
ATOM 10 O3' A A2406 -112.924 -36.030 44.977 1.00 66.67 O
ATOM 11 C2' A A2406 -110.982 -37.351 45.794 1.00 76.11 C
ATOM 12 O2' A A2406 -110.133 -36.690 44.874 1.00 77.85 O
ATOM 13 C1' A A2406 -110.295 -37.396 47.157 1.00 77.46 C
ATOM 14 N9 A A2406 -110.651 -38.527 48.003 1.00 73.62 N
ATOM 15 C8 A A2406 -111.905 -38.894 48.385 1.00 72.43 C
ATOM 16 N7 A A2406 -111.934 -39.953 49.156 1.00 71.20 N
ATOM 17 C5 A A2406 -110.605 -40.296 49.300 1.00 67.77 C
ATOM 18 C6 A A2406 -109.975 -41.331 50.006 1.00 68.69 C
ATOM 19 N6 A A2406 -110.652 -42.232 50.717 1.00 75.37 N
ATOM 20 N1 A A2406 -108.636 -41.404 49.947 1.00 66.51 N
ATOM 21 C2 A A2406 -107.984 -40.497 49.220 1.00 71.02 C
ATOM 22 N3 A A2406 -108.462 -39.477 48.513 1.00 69.75 N
ATOM 23 C4 A A2406 -109.797 -39.429 48.597 1.00 71.00 C
ATOM 24 P U A2407 -112.585 -34.656 44.218 1.00 72.29 P
ATOM 25 OP1 U A2407 -111.537 -33.925 44.952 1.00 75.44 O
ATOM 26 OP2 U A2407 -113.866 -33.981 43.927 1.00 82.19 O
ATOM 27 O5' U A2407 -111.975 -35.142 42.828 1.00 58.55 O
TER
ATOM 1 O3' G B2375 -114.417 -44.390 49.173 1.00 62.65 O
ATOM 2 P A B2376 -114.342 -44.440 50.775 1.00 56.21 P
ATOM 3 OP1 A B2376 -115.733 -44.394 51.225 1.00 66.78 O
ATOM 4 OP2 A B2376 -113.367 -43.442 51.265 1.00 65.25 O
ATOM 5 O5' A B2376 -113.765 -45.886 51.102 1.00 53.61 O
ATOM 6 C5' A B2376 -114.478 -47.004 50.626 1.00 56.22 C
ATOM 7 C4' A B2376 -113.618 -48.245 50.716 1.00 53.90 C
ATOM 8 O4' A B2376 -112.706 -48.344 49.599 1.00 53.36 O
ATOM 9 C3' A B2376 -112.672 -48.288 51.901 1.00 49.27 C
ATOM 10 O3' A B2376 -113.366 -48.554 53.095 1.00 47.59 O
ATOM 11 C2' A B2376 -111.861 -49.500 51.504 1.00 55.92 C
ATOM 12 O2' A B2376 -112.581 -50.682 51.768 1.00 54.44 O
ATOM 13 C1' A B2376 -111.726 -49.286 49.998 1.00 68.08 C
ATOM 14 N9 A B2376 -110.387 -48.815 49.680 1.00 73.77 N
ATOM 15 C8 A B2376 -109.229 -49.484 49.956 1.00 75.24 C
ATOM 16 N7 A B2376 -108.142 -48.862 49.577 1.00 62.49 N
ATOM 17 C5 A B2376 -108.626 -47.707 49.017 1.00 56.06 C
ATOM 18 C6 A B2376 -107.955 -46.641 48.434 1.00 60.23 C
ATOM 19 N6 A B2376 -106.629 -46.605 48.339 1.00 57.60 N
ATOM 20 N1 A B2376 -108.717 -45.636 47.968 1.00 71.03 N
ATOM 21 C2 A B2376 -110.057 -45.711 48.088 1.00 61.70 C
ATOM 22 N3 A B2376 -110.810 -46.673 48.615 1.00 51.51 N
ATOM 23 C4 A B2376 -110.010 -47.649 49.068 1.00 58.49 C
ATOM 24 P A B2377 -112.930 -47.734 54.388 1.00 54.91 P
ATOM 25 OP1 A B2377 -113.558 -48.377 55.573 1.00 55.30 O
ATOM 26 OP2 A B2377 -113.171 -46.296 54.086 1.00 49.32 O
ATOM 27 O5' A B2377 -111.341 -47.991 54.415 1.00 74.73 O
TER
Atoms:
OP1: (-112.140,-31.619,48.271)
OP2: (-113.846,-32.804,49.763)
C3': (-112.241,-36.558,46.142)
C1': (-110.295,-37.396,47.157)
C5': (-112.604,-34.837,48.058)
O4': (-110.691,-36.235,47.861)
C8: (-111.905,-38.894,48.385)
O2': (-110.133,-36.690,44.874)
C6: (-109.975,-41.331,50.006)
C5: (-110.605,-40.296,49.300)
C4: (-109.797,-39.429,48.597)
P: (-112.442,-32.581,49.352)
C4': (-111.663,-35.506,47.081)
C2': (-110.982,-37.351,45.794)
C2: (-107.984,-40.497,49.220)
N1: (-108.636,-41.404,49.947)
N3: (-108.462,-39.477,48.513)
N6: (-110.652,-42.232,50.717)
N7: (-111.934,-39.953,49.156)
N9: (-110.651,-38.527,48.003)
O5': (-111.853,-34.011,48.954)
O3': (-112.924,-36.030,44.977)
OP2: (-113.846,-32.804,49.763)
C3': (-112.241,-36.558,46.142)
C1': (-110.295,-37.396,47.157)
C5': (-112.604,-34.837,48.058)
O4': (-110.691,-36.235,47.861)
C8: (-111.905,-38.894,48.385)
O2': (-110.133,-36.690,44.874)
C6: (-109.975,-41.331,50.006)
C5: (-110.605,-40.296,49.300)
C4: (-109.797,-39.429,48.597)
P: (-112.442,-32.581,49.352)
C4': (-111.663,-35.506,47.081)
C2': (-110.982,-37.351,45.794)
C2: (-107.984,-40.497,49.220)
N1: (-108.636,-41.404,49.947)
N3: (-108.462,-39.477,48.513)
N6: (-110.652,-42.232,50.717)
N7: (-111.934,-39.953,49.156)
N9: (-110.651,-38.527,48.003)
O5': (-111.853,-34.011,48.954)
O3': (-112.924,-36.030,44.977)
OP1: (-115.733,-44.394,51.225)
OP2: (-113.367,-43.442,51.265)
C3': (-112.672,-48.288,51.901)
C1': (-111.726,-49.286,49.998)
C5': (-114.478,-47.004,50.626)
O4': (-112.706,-48.344,49.599)
C8: (-109.229,-49.484,49.956)
O2': (-112.581,-50.682,51.768)
C6: (-107.955,-46.641,48.434)
C5: (-108.626,-47.707,49.017)
C4: (-110.010,-47.649,49.068)
P: (-114.342,-44.440,50.775)
C4': (-113.618,-48.245,50.716)
C2': (-111.861,-49.500,51.504)
C2: (-110.057,-45.711,48.088)
N1: (-108.717,-45.636,47.968)
N3: (-110.810,-46.673,48.615)
N6: (-106.629,-46.605,48.339)
N7: (-108.142,-48.862,49.577)
N9: (-110.387,-48.815,49.680)
O5': (-113.765,-45.886,51.102)
O3': (-113.366,-48.554,53.095)
OP2: (-113.367,-43.442,51.265)
C3': (-112.672,-48.288,51.901)
C1': (-111.726,-49.286,49.998)
C5': (-114.478,-47.004,50.626)
O4': (-112.706,-48.344,49.599)
C8: (-109.229,-49.484,49.956)
O2': (-112.581,-50.682,51.768)
C6: (-107.955,-46.641,48.434)
C5: (-108.626,-47.707,49.017)
C4: (-110.010,-47.649,49.068)
P: (-114.342,-44.440,50.775)
C4': (-113.618,-48.245,50.716)
C2': (-111.861,-49.500,51.504)
C2: (-110.057,-45.711,48.088)
N1: (-108.717,-45.636,47.968)
N3: (-110.810,-46.673,48.615)
N6: (-106.629,-46.605,48.339)
N7: (-108.142,-48.862,49.577)
N9: (-110.387,-48.815,49.680)
O5': (-113.765,-45.886,51.102)
O3': (-113.366,-48.554,53.095)
Image (generated by PyMOL):