ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A796:A693

Extra

PDB:
ATOM 1 O3' U A 795 55.445 -44.732 -28.809 1.00 38.98 O
ATOM 2 P A A 796 55.913 -46.257 -28.897 1.00 33.81 P
ATOM 3 OP1 A A 796 57.196 -46.389 -28.167 1.00 36.67 O
ATOM 4 OP2 A A 796 55.839 -46.652 -30.319 1.00 38.45 O
ATOM 5 O5' A A 796 54.779 -47.077 -28.119 1.00 38.02 O
ATOM 6 C5' A A 796 54.703 -47.064 -26.687 1.00 38.70 C
ATOM 7 C4' A A 796 53.798 -48.185 -26.150 1.00 38.90 C
ATOM 8 O4' A A 796 52.431 -47.989 -26.613 1.00 34.74 O
ATOM 9 C3' A A 796 54.161 -49.636 -26.460 1.00 32.40 C
ATOM 10 O3' A A 796 53.914 -50.495 -25.328 1.00 32.35 O
ATOM 11 C2' A A 796 53.203 -49.984 -27.587 1.00 38.97 C
ATOM 12 O2' A A 796 52.896 -51.346 -27.620 1.00 47.20 O
ATOM 13 C1' A A 796 51.964 -49.159 -27.239 1.00 39.73 C
ATOM 14 N9 A A 796 51.239 -48.743 -28.440 1.00 43.03 N
ATOM 15 C8 A A 796 51.799 -48.157 -29.545 1.00 46.74 C
ATOM 16 N7 A A 796 50.942 -47.879 -30.487 1.00 48.73 N
ATOM 17 C5 A A 796 49.730 -48.304 -29.968 1.00 44.61 C
ATOM 18 C6 A A 796 48.435 -48.276 -30.483 1.00 42.19 C
ATOM 19 N6 A A 796 48.123 -47.781 -31.681 1.00 44.23 N
ATOM 20 N1 A A 796 47.449 -48.778 -29.719 1.00 38.66 N
ATOM 21 C2 A A 796 47.758 -49.268 -28.522 1.00 40.30 C
ATOM 22 N3 A A 796 48.936 -49.346 -27.927 1.00 41.08 N
ATOM 23 C4 A A 796 49.897 -48.840 -28.711 1.00 40.57 C
ATOM 24 P A A 797 55.116 -51.386 -24.698 1.00 43.03 P
ATOM 25 OP1 A A 797 56.400 -50.613 -24.741 1.00 44.71 O
ATOM 26 OP2 A A 797 55.057 -52.738 -25.316 1.00 40.07 O
ATOM 27 O5' A A 797 54.731 -51.587 -23.167 1.00 39.77 O
TER

ATOM 1 O3' G B 692 48.978 -45.958 -34.299 1.00 38.98 O
ATOM 2 P A B 693 48.403 -44.452 -34.314 1.00 35.43 P
ATOM 3 OP1 A B 693 46.990 -44.474 -33.860 1.00 45.14 O
ATOM 4 OP2 A B 693 48.731 -43.868 -35.651 1.00 27.88 O
ATOM 5 O5' A B 693 49.261 -43.730 -33.184 1.00 37.12 O
ATOM 6 C5' A B 693 49.381 -44.314 -31.892 1.00 36.50 C
ATOM 7 C4' A B 693 49.266 -43.254 -30.844 1.00 37.22 C
ATOM 8 O4' A B 693 50.520 -42.533 -30.696 1.00 47.07 O
ATOM 9 C3' A B 693 48.205 -42.219 -31.160 1.00 43.64 C
ATOM 10 O3' A B 693 47.327 -42.055 -30.067 1.00 51.34 O
ATOM 11 C2' A B 693 49.005 -40.960 -31.495 1.00 44.90 C
ATOM 12 O2' A B 693 48.338 -39.759 -31.157 1.00 48.13 O
ATOM 13 C1' A B 693 50.263 -41.150 -30.658 1.00 43.88 C
ATOM 14 N9 A B 693 51.427 -40.429 -31.180 1.00 43.09 N
ATOM 15 C8 A B 693 51.729 -40.169 -32.492 1.00 46.22 C
ATOM 16 N7 A B 693 52.829 -39.475 -32.660 1.00 45.49 N
ATOM 17 C5 A B 693 53.292 -39.269 -31.370 1.00 44.42 C
ATOM 18 C6 A B 693 54.423 -38.604 -30.869 1.00 45.14 C
ATOM 19 N6 A B 693 55.337 -37.990 -31.636 1.00 48.99 N
ATOM 20 N1 A B 693 54.594 -38.594 -29.533 1.00 43.11 N
ATOM 21 C2 A B 693 53.686 -39.202 -28.758 1.00 46.56 C
ATOM 22 N3 A B 693 52.584 -39.851 -29.103 1.00 46.07 N
ATOM 23 C4 A B 693 52.441 -39.854 -30.443 1.00 44.64 C
ATOM 24 P G B 694 45.764 -42.385 -30.251 1.00 44.02 P
ATOM 25 OP1 G B 694 45.530 -43.099 -31.551 1.00 36.77 O
ATOM 26 OP2 G B 694 45.063 -41.085 -29.974 1.00 40.20 O
ATOM 27 O5' G B 694 45.461 -43.398 -29.062 1.00 37.10 O
TER

Atoms:
OP1: (57.196,-46.389,-28.167)
OP2: (55.839,-46.652,-30.319)
C3': (54.161,-49.636,-26.460)
C1': (51.964,-49.159,-27.239)
C5': (54.703,-47.064,-26.687)
O4': (52.431,-47.989,-26.613)
C8: (51.799,-48.157,-29.545)
O2': (52.896,-51.346,-27.620)
C6: (48.435,-48.276,-30.483)
C5: (49.730,-48.304,-29.968)
C4: (49.897,-48.840,-28.711)
P: (55.913,-46.257,-28.897)
C4': (53.798,-48.185,-26.150)
C2': (53.203,-49.984,-27.587)
C2: (47.758,-49.268,-28.522)
N1: (47.449,-48.778,-29.719)
N3: (48.936,-49.346,-27.927)
N6: (48.123,-47.781,-31.681)
N7: (50.942,-47.879,-30.487)
N9: (51.239,-48.743,-28.440)
O5': (54.779,-47.077,-28.119)
O3': (53.914,-50.495,-25.328)
OP1: (46.990,-44.474,-33.860)
OP2: (48.731,-43.868,-35.651)
C3': (48.205,-42.219,-31.160)
C1': (50.263,-41.150,-30.658)
C5': (49.381,-44.314,-31.892)
O4': (50.520,-42.533,-30.696)
C8: (51.729,-40.169,-32.492)
O2': (48.338,-39.759,-31.157)
C6: (54.423,-38.604,-30.869)
C5: (53.292,-39.269,-31.370)
C4: (52.441,-39.854,-30.443)
P: (48.403,-44.452,-34.314)
C4': (49.266,-43.254,-30.844)
C2': (49.005,-40.960,-31.495)
C2: (53.686,-39.202,-28.758)
N1: (54.594,-38.594,-29.533)
N3: (52.584,-39.851,-29.103)
N6: (55.337,-37.990,-31.636)
N7: (52.829,-39.475,-32.660)
N9: (51.427,-40.429,-31.180)
O5': (49.261,-43.730,-33.184)
O3': (47.327,-42.055,-30.067)
Image (generated by PyMOL):
PyMOL image
show in jmol