ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3LWQ:D28:D24

Extra

PDB:
ATOM 1 O3' A A 27 54.179 -8.980 25.120 1.00104.57 O
ATOM 2 P A A 28 55.299 -7.851 24.935 1.00 76.33 P
ATOM 3 OP1 A A 28 54.709 -6.791 24.080 1.00 70.45 O
ATOM 4 OP2 A A 28 56.614 -8.452 24.613 1.00 60.67 O
ATOM 5 O5' A A 28 55.389 -7.184 26.384 1.00 93.56 O
ATOM 6 C5' A A 28 55.770 -7.985 27.496 1.00 87.44 C
ATOM 7 C4' A A 28 56.350 -7.130 28.590 1.00 78.55 C
ATOM 8 O4' A A 28 56.591 -7.929 29.781 1.00 77.77 O
ATOM 9 C3' A A 28 57.677 -6.477 28.246 1.00 74.27 C
ATOM 10 O3' A A 28 57.733 -5.232 28.940 1.00 88.61 O
ATOM 11 C2' A A 28 58.673 -7.452 28.862 1.00 55.49 C
ATOM 12 O2' A A 28 59.941 -6.904 29.139 1.00 59.19 O
ATOM 13 C1' A A 28 57.955 -7.839 30.144 1.00 65.24 C
ATOM 14 N9 A A 28 58.398 -9.114 30.718 1.00 83.28 N
ATOM 15 C8 A A 28 58.935 -9.310 31.961 1.00 91.14 C
ATOM 16 N7 A A 28 59.254 -10.561 32.221 1.00 95.34 N
ATOM 17 C5 A A 28 58.904 -11.242 31.066 1.00 96.63 C
ATOM 18 C6 A A 28 58.991 -12.605 30.693 1.00 98.34 C
ATOM 19 N6 A A 28 59.476 -13.572 31.482 1.00101.96 N
ATOM 20 N1 A A 28 58.553 -12.945 29.466 1.00 94.12 N
ATOM 21 C2 A A 28 58.066 -11.989 28.668 1.00 98.15 C
ATOM 22 N3 A A 28 57.938 -10.682 28.900 1.00 99.57 N
ATOM 23 C4 A A 28 58.381 -10.364 30.129 1.00 94.81 C
ATOM 24 P U A 29 58.157 -3.888 28.200 1.00 68.08 P
ATOM 25 OP1 U A 29 59.052 -4.225 27.064 1.00 66.59 O
ATOM 26 OP2 U A 29 58.557 -2.919 29.240 1.00 63.93 O
ATOM 27 O5' U A 29 56.811 -3.380 27.498 1.00 74.88 O
TER

ATOM 1 O3' G B 23 59.034 -13.424 37.240 1.00103.50 O
ATOM 2 P A B 24 59.355 -14.218 35.866 1.00110.75 P
ATOM 3 OP1 A B 24 60.166 -15.399 36.238 1.00117.22 O
ATOM 4 OP2 A B 24 59.865 -13.272 34.849 1.00115.21 O
ATOM 5 O5' A B 24 57.981 -14.838 35.324 1.00 80.06 O
ATOM 6 C5' A B 24 57.483 -16.081 35.816 1.00 91.65 C
ATOM 7 C4' A B 24 56.663 -16.808 34.776 1.00 98.81 C
ATOM 8 O4' A B 24 55.692 -15.891 34.198 1.00 98.81 O
ATOM 9 C3' A B 24 57.451 -17.378 33.597 1.00108.83 C
ATOM 10 O3' A B 24 56.770 -18.537 33.107 1.00124.10 O
ATOM 11 C2' A B 24 57.338 -16.253 32.574 1.00 97.93 C
ATOM 12 O2' A B 24 57.595 -16.609 31.229 1.00 85.73 O
ATOM 13 C1' A B 24 55.893 -15.814 32.797 1.00 98.73 C
ATOM 14 N9 A B 24 55.626 -14.446 32.346 1.00 94.51 N
ATOM 15 C8 A B 24 55.932 -13.289 33.001 1.00 94.06 C
ATOM 16 N7 A B 24 55.596 -12.200 32.355 1.00 94.58 N
ATOM 17 C5 A B 24 55.037 -12.677 31.186 1.00 99.50 C
ATOM 18 C6 A B 24 54.483 -12.019 30.075 1.00 98.66 C
ATOM 19 N6 A B 24 54.405 -10.690 29.984 1.00100.63 N
ATOM 20 N1 A B 24 54.011 -12.780 29.069 1.00 95.83 N
ATOM 21 C2 A B 24 54.092 -14.109 29.185 1.00103.06 C
ATOM 22 N3 A B 24 54.588 -14.844 30.180 1.00106.95 N
ATOM 23 C4 A B 24 55.048 -14.057 31.162 1.00100.53 C
ATOM 24 P U B 25 57.472 -19.955 32.842 1.00119.69 P
ATOM 25 OP1 U B 25 56.389 -20.924 32.546 1.00113.65 O
ATOM 26 OP2 U B 25 58.487 -20.214 33.892 1.00115.37 O
ATOM 27 O5' U B 25 58.195 -19.754 31.432 1.00150.13 O
TER

Atoms:
OP1: (54.709,-6.791,24.080)
OP2: (56.614,-8.452,24.613)
C3': (57.677,-6.477,28.246)
C1': (57.955,-7.839,30.144)
C5': (55.770,-7.985,27.496)
O4': (56.591,-7.929,29.781)
C8: (58.935,-9.310,31.961)
O2': (59.941,-6.904,29.139)
C6: (58.991,-12.605,30.693)
C5: (58.904,-11.242,31.066)
C4: (58.381,-10.364,30.129)
P: (55.299,-7.851,24.935)
C4': (56.350,-7.130,28.590)
C2': (58.673,-7.452,28.862)
C2: (58.066,-11.989,28.668)
N1: (58.553,-12.945,29.466)
N3: (57.938,-10.682,28.900)
N6: (59.476,-13.572,31.482)
N7: (59.254,-10.561,32.221)
N9: (58.398,-9.114,30.718)
O5': (55.389,-7.184,26.384)
O3': (57.733,-5.232,28.940)
OP1: (60.166,-15.399,36.238)
OP2: (59.865,-13.272,34.849)
C3': (57.451,-17.378,33.597)
C1': (55.893,-15.814,32.797)
C5': (57.483,-16.081,35.816)
O4': (55.692,-15.891,34.198)
C8: (55.932,-13.289,33.001)
O2': (57.595,-16.609,31.229)
C6: (54.483,-12.019,30.075)
C5: (55.037,-12.677,31.186)
C4: (55.048,-14.057,31.162)
P: (59.355,-14.218,35.866)
C4': (56.663,-16.808,34.776)
C2': (57.338,-16.253,32.574)
C2: (54.092,-14.109,29.185)
N1: (54.011,-12.780,29.069)
N3: (54.588,-14.844,30.180)
N6: (54.405,-10.690,29.984)
N7: (55.596,-12.200,32.355)
N9: (55.626,-14.446,32.346)
O5': (57.981,-14.838,35.324)
O3': (56.770,-18.537,33.107)
Image (generated by PyMOL):
PyMOL image
show in jmol